BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015855
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   199   3e-49
ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   197   6e-49
ref|XP_002466079.1| hypothetical protein SORBIDRAFT_01g000780 [S...   196   2e-48
gb|ACG40530.1| protein SOF1 [Zea mays]                                196   2e-48
ref|NP_001141716.1| uncharacterized protein LOC100273845 [Zea ma...   196   2e-48

>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
           nucleolar RNA (U3 snorna) associated protein, putative
           [Ricinus communis]
          Length = 452

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/114 (79%), Positives = 108/114 (94%)
 Frame = -3

Query: 344 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKAVEYVRALKAAKLEKIFARPFVG 165
           M+VK ISRS+DDFTRERSQDL +VFRN+DP+LRTQEK++EYVRAL AAKL+KIFARPF+G
Sbjct: 1   MKVKVISRSSDDFTRERSQDLQRVFRNFDPSLRTQEKSIEYVRALNAAKLDKIFARPFIG 60

Query: 164 AMEGHIDGITCMAKNPNHLKGIFSGSIDGDIRLWDLATRRTVCQFPGRKGAAQG 3
           AM+GHID I+CMAKNPN+LKGIFSGS+DGDIRLWD+A+RRTVCQFPG +GA +G
Sbjct: 61  AMDGHIDAISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRG 114


>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
           gi|302143337|emb|CBI21898.3| unnamed protein product
           [Vitis vinifera]
          Length = 452

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/114 (79%), Positives = 106/114 (92%)
 Frame = -3

Query: 344 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKAVEYVRALKAAKLEKIFARPFVG 165
           M+VK ISRS D+FTRERSQDL +VFRN+DPNLR QEKAVEYVRAL AAKL+K+FARPF+G
Sbjct: 1   MKVKVISRSTDEFTRERSQDLQRVFRNFDPNLRKQEKAVEYVRALNAAKLDKVFARPFIG 60

Query: 164 AMEGHIDGITCMAKNPNHLKGIFSGSIDGDIRLWDLATRRTVCQFPGRKGAAQG 3
           AM+GHID I+CMAKNPN+LKGIFSGS+DGDIRLWD+A+RRTVCQFPG +GA +G
Sbjct: 61  AMDGHIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRG 114


>ref|XP_002466079.1| hypothetical protein SORBIDRAFT_01g000780 [Sorghum bicolor]
           gi|241919933|gb|EER93077.1| hypothetical protein
           SORBIDRAFT_01g000780 [Sorghum bicolor]
          Length = 452

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 344 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKAVEYVRALKAAKLEKIFARPFVG 165
           MRVK ISRS DD+TRERSQDL KVFRNYDP LR+QEKAVEY RAL AAKLEKIFA+PF+G
Sbjct: 1   MRVKVISRSTDDYTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFAKPFIG 60

Query: 164 AMEGHIDGITCMAKNPNHLKGIFSGSIDGDIRLWDLATRRTVCQFPGRKGAAQG 3
           AM+GHID ++CMAKNPNHLK IFSGS+DGD+RLWD+A R+TVCQFPG +GA +G
Sbjct: 61  AMDGHIDAVSCMAKNPNHLKAIFSGSMDGDVRLWDIAARKTVCQFPGHQGAVRG 114


>gb|ACG40530.1| protein SOF1 [Zea mays]
          Length = 452

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 344 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKAVEYVRALKAAKLEKIFARPFVG 165
           MRVK ISRS DD+TRERSQDL KVFRNYDP LR+QEKAVEY RAL AAKLEKIFA+PF+G
Sbjct: 1   MRVKVISRSTDDYTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFAKPFIG 60

Query: 164 AMEGHIDGITCMAKNPNHLKGIFSGSIDGDIRLWDLATRRTVCQFPGRKGAAQG 3
           AM+GHID ++CMAKNPNHLK IFSGS+DGD+RLWD+A R+TVCQFPG +GA +G
Sbjct: 61  AMDGHIDAVSCMAKNPNHLKAIFSGSMDGDVRLWDIAARKTVCQFPGHQGAVRG 114


>ref|NP_001141716.1| uncharacterized protein LOC100273845 [Zea mays]
           gi|194705656|gb|ACF86912.1| unknown [Zea mays]
           gi|414874001|tpg|DAA52558.1| TPA: protein SOF1 [Zea
           mays]
          Length = 452

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/114 (78%), Positives = 103/114 (90%)
 Frame = -3

Query: 344 MRVKTISRSNDDFTRERSQDLLKVFRNYDPNLRTQEKAVEYVRALKAAKLEKIFARPFVG 165
           MRVK ISRS DD+TRERSQDL KVFRNYDP LR+QEKAVEY RAL AAKLEKIFA+PF+G
Sbjct: 1   MRVKVISRSTDDYTRERSQDLQKVFRNYDPALRSQEKAVEYTRALNAAKLEKIFAKPFIG 60

Query: 164 AMEGHIDGITCMAKNPNHLKGIFSGSIDGDIRLWDLATRRTVCQFPGRKGAAQG 3
           AM+GHID ++CMAKNPNHLK IFSGS+DGD+RLWD+A R+TVCQFPG +GA +G
Sbjct: 61  AMDGHIDAVSCMAKNPNHLKAIFSGSMDGDVRLWDIAARKTVCQFPGHQGAVRG 114