BLASTX nr result

ID: Coptis23_contig00015844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015844
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30031.3| unnamed protein product [Vitis vinifera]              217   5e-54
ref|XP_002513432.1| conserved hypothetical protein [Ricinus comm...   211   3e-52
ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253...   207   5e-51
ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
emb|CBI16449.3| unnamed protein product [Vitis vinifera]              197   4e-48

>emb|CBI30031.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score =  217 bits (552), Expect = 5e-54
 Identities = 120/233 (51%), Positives = 143/233 (61%), Gaps = 4/233 (1%)
 Frame = -3

Query: 1087 YPSTISSERGQVAHRVSSGALVTNEPAQPAGFDASLIGRKVFTRWPDDNSFYEAFITDFK 908
            Y S+I++ RGQ   R SSG L TNEPA+P  +D  LIGRKV T WP+DN+FYEA ITD+ 
Sbjct: 214  YHSSITAGRGQF--RTSSGTLTTNEPAEPGTYDP-LIGRKVMTLWPEDNNFYEAVITDYN 270

Query: 907  --EGLYALVYDANTPNEAMEWVNFNEISPEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAH 734
              EGL+ALVYD NT NE  EWV+  EISPEDI+WEG DPGI  +GGR G G G+K+S + 
Sbjct: 271  PLEGLHALVYDINTTNETWEWVDLKEISPEDIQWEGEDPGISRQGGRGGQGRGVKRSTSR 330

Query: 733  SGTLPGVKRGRGRPPSKLKKDVPPSQNGTVKKA--SDNIEILRTDTLIKEVEKIFGGSRP 560
               LP   RGRG    +  ++ PPSQNG  KK   SD+IEI  TDTLIKEVE++FG S P
Sbjct: 331  GVALPSAGRGRGSTKVQSNREFPPSQNGIGKKVSDSDDIEIFHTDTLIKEVERVFGASHP 390

Query: 559  DPXXXXXXXXXXXXXXXXXXXXXXXXXXASDGRDEGERPLSLGPSTQRELG*R 401
            DP                          ASDG  + E+PLS G    RE G R
Sbjct: 391  DPVELEKAKKMLKEHEQALVDAISRLGDASDGESDEEQPLSRGQRMDREQGWR 443


>ref|XP_002513432.1| conserved hypothetical protein [Ricinus communis]
            gi|223547340|gb|EEF48835.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 402

 Score =  211 bits (537), Expect = 3e-52
 Identities = 107/180 (59%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
 Frame = -3

Query: 1087 YPSTISSERGQVAHRVSSGALVTNEPAQPAGFDASLIGRKVFTRWPDDNSFYEAFITDFK 908
            YPS   + R Q A+R SSGA   NEPA+   +D  LIGRKV+TRWP+DN FYEA ITD+K
Sbjct: 190  YPSAGLTGRAQAANRSSSGAFAANEPAEATSYD--LIGRKVWTRWPEDNHFYEAVITDYK 247

Query: 907  --EGLYALVYDANTPNEAMEWVNFNEISPEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAH 734
              EG +ALVYD NT +E  EWVN  EISPEDIRW+  D G+F RGGR GPG G KKS+AH
Sbjct: 248  PAEGRHALVYDINTADETWEWVNLKEISPEDIRWKDEDQGVFRRGGRPGPGRGNKKSMAH 307

Query: 733  SGTLPGVKRGRGRPPSKLKKDVPPSQNGTVKKASDNIEILRTDTLIKEVEKIFGGSRPDP 554
             G L G  RGRG    + +K+ P +QNG  +KA D+IEIL TDTLIKEVEK+F  +  DP
Sbjct: 308  GGGLGGAGRGRGTMKGQSRKEFPLAQNGIGRKALDDIEILHTDTLIKEVEKVFSANHADP 367


>ref|XP_002275316.2| PREDICTED: uncharacterized protein LOC100253804 [Vitis vinifera]
          Length = 431

 Score =  207 bits (526), Expect = 5e-51
 Identities = 107/182 (58%), Positives = 128/182 (70%), Gaps = 4/182 (2%)
 Frame = -3

Query: 1087 YPSTISSERGQVAHRVSSGALVTNEPAQPAGFDASLIGRKVFTRWPDDNSFYEAFITDFK 908
            Y S+I++ RGQ   R SSG L TNEPA+P  +D  LIGRKV T WP+DN+FYEA ITD+ 
Sbjct: 214  YHSSITAGRGQF--RTSSGTLTTNEPAEPGTYDP-LIGRKVMTLWPEDNNFYEAVITDYN 270

Query: 907  --EGLYALVYDANTPNEAMEWVNFNEISPEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAH 734
              EGL+ALVYD NT NE  EWV+  EISPEDI+WEG DPGI  +GGR G G G+K+S + 
Sbjct: 271  PLEGLHALVYDINTTNETWEWVDLKEISPEDIQWEGEDPGISRQGGRGGQGRGVKRSTSR 330

Query: 733  SGTLPGVKRGRGRPPSKLKKDVPPSQNGTVKKA--SDNIEILRTDTLIKEVEKIFGGSRP 560
               LP   RGRG    +  ++ PPSQNG  KK   SD+IEI  TDTLIKEVE++FG S P
Sbjct: 331  GVALPSAGRGRGSTKVQSNREFPPSQNGIGKKVSDSDDIEIFHTDTLIKEVERVFGASHP 390

Query: 559  DP 554
            DP
Sbjct: 391  DP 392


>ref|XP_002299156.1| predicted protein [Populus trichocarpa] gi|222846414|gb|EEE83961.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  197 bits (502), Expect = 3e-48
 Identities = 103/178 (57%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
 Frame = -3

Query: 1081 STISSERGQVAHRVSSGALVTNEPAQPAGFDASLIGRKVFTRWPDDNSFYEAFITDFK-- 908
            ST  S R Q A+R SSG   TN+          LIG+KV+TRWP+DN FYEA ITD+   
Sbjct: 197  STGLSSRAQAANRGSSGVFATND----------LIGKKVWTRWPEDNHFYEAVITDYNPV 246

Query: 907  EGLYALVYDANTPNEAMEWVNFNEISPEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAHSG 728
            EG +ALVYD NT +E  EWVN  EISPEDIRWEG +PG+F RGGR GPG G KK++A  G
Sbjct: 247  EGRHALVYDINTGDETWEWVNLKEISPEDIRWEGEEPGLFRRGGRPGPGRGNKKAIARGG 306

Query: 727  TLPGVKRGRGRPPSKLKKDVPPSQNGTVKKASDNIEILRTDTLIKEVEKIFGGSRPDP 554
             +    RGRG    + KKD P  QNG  KKA  +IEIL T+TLIKEVEK+FG S PDP
Sbjct: 307  AVVTAGRGRGTTKGQSKKDFPLIQNGIGKKAMGDIEILHTNTLIKEVEKVFGASHPDP 364


>emb|CBI16449.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  197 bits (501), Expect = 4e-48
 Identities = 101/179 (56%), Positives = 123/179 (68%), Gaps = 2/179 (1%)
 Frame = -3

Query: 1087 YPSTISSERGQVAHRVSSGALVTNEPAQPAGFDASLIGRKVFTRWPDDNSFYEAFITDFK 908
            YPS   + R Q+A+R SSGA V NE A+   +D  LIG+KV+TRWP+DN FYEA ITD+ 
Sbjct: 193  YPSAGLTGRPQLANRGSSGAFVGNEAAEGTTYDP-LIGKKVWTRWPEDNHFYEAVITDYN 251

Query: 907  --EGLYALVYDANTPNEAMEWVNFNEISPEDIRWEGGDPGIFNRGGRVGPGHGIKKSVAH 734
              EG +ALVYD NT NE  EWVN  EISPEDIRWEG + G+  RG R GPG G+KKS+A 
Sbjct: 252  PVEGRHALVYDINTTNETWEWVNLKEISPEDIRWEGDESGMSRRGSRPGPGRGMKKSMAR 311

Query: 733  SGTLPGVKRGRGRPPSKLKKDVPPSQNGTVKKASDNIEILRTDTLIKEVEKIFGGSRPD 557
             G + G  RGRG P  + KK  PPSQNG  KK   ++EI  TD+LIKEVE++   + PD
Sbjct: 312  GGAVTGAGRGRGTPKGQSKKVFPPSQNGLEKKDDSSLEIYNTDSLIKEVERVVTTANPD 370


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