BLASTX nr result
ID: Coptis23_contig00015840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015840
(1577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251... 585 e-164
ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|2... 571 e-160
ref|XP_002519751.1| conserved hypothetical protein [Ricinus comm... 568 e-159
ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago tr... 507 e-141
dbj|BAE71246.1| hypothetical protein [Trifolium pratense] 485 e-134
>ref|XP_002271571.1| PREDICTED: uncharacterized protein LOC100251997 [Vitis vinifera]
gi|297740629|emb|CBI30811.3| unnamed protein product
[Vitis vinifera]
Length = 665
Score = 585 bits (1508), Expect = e-164
Identities = 300/516 (58%), Positives = 398/516 (77%), Gaps = 4/516 (0%)
Frame = +1
Query: 1 EKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSGGPNDL 180
E+AKQL+GS+LLV E+DRP LEEGEFY+RDL+GM+V LK+TG VGTVVNVF++G NDL
Sbjct: 152 EEAKQLVGSSLLVREDDRPELEEGEFYSRDLLGMRVTLKETGEPVGTVVNVFSTGA-NDL 210
Query: 181 LQVMLNSSDEAHDATGSSEAGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPKGLLELN 360
LQVML+ S + D TG+ ++ GVSG L WVPFV+AIVP+VDMN+REM+ITPPKGLLELN
Sbjct: 211 LQVMLDPSVKTPDHTGNPKSETGVSGPLVWVPFVEAIVPNVDMNKREMQITPPKGLLELN 270
Query: 361 LRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNLLADHI 540
LRS RSKKERRQLEWK+R+K RRLIAAKKKL EMEQ+H+FHG RFG+KAQR+LLAD I
Sbjct: 271 LRSHERSKKERRQLEWKQRRKFQRRLIAAKKKLHEMEQQHVFHGFRFGQKAQRSLLADQI 330
Query: 541 VGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDNMDTTE 720
VG+N KL Q ALQN E + RW+ SEFIS TKL + +KVS++CL + G+++ +D+
Sbjct: 331 VGVNSKLLQQALQNIELSSQRWSSSEFISTKLTKLGQRTLKVSKKCLTTPGSEEKLDSNF 390
Query: 721 GMKIKGLNMISEGKAAIVLVVSDQTSQGRFSNLEQGDSGRAENSSNISHIQALLNDE--- 891
++ KGL+++S+GK AIVL V+D GR S E DS A NS+ S +Q LL+D+
Sbjct: 391 ELQEKGLHLMSKGKMAIVLFVNDSEKHGRCSVPELVDSESAGNST--SFLQTLLSDDRIS 448
Query: 892 -LEGDRGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNSVEEEHR 1068
+ DR +PL+MVSPAHE +++ F +HD+F+F+ KVWFLE+E LPVVSNS+ E+
Sbjct: 449 LKKEDRVSVPLIMVSPAHEVHSLENLFSNHDHFAFDPKKVWFLEDEKLPVVSNSLGGENT 508
Query: 1069 HKVLMKTQWEILQSPVGSGGIFSLLSSHTILEDLNEIGVEYVQVCSLGKRSIVGNPLFFG 1248
K+LMK+ WEILQ+ VGSGG+ SLLSS IL++L+E+GVEY+++CS+ + + G+ L G
Sbjct: 509 QKILMKSPWEILQTSVGSGGVISLLSSENILDNLSEMGVEYIEICSVNEEFVSGHSL-LG 567
Query: 1249 YVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSHVEMIDK 1428
V S E+D+GI+I + + E++F++IFS+K++ K+ KQ KL+FH I K NSHVEM++K
Sbjct: 568 LVSSLESDVGIQISEGIEDIEENFHMIFSMKFMSKLAKQMKKLQFHGIPKLNSHVEMVEK 627
Query: 1429 EWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1536
EWVDV P SPNS EL CSI SSL+ C D++CV+E+
Sbjct: 628 EWVDVTPTSPNSLELGCSIYSSLNACSLDKVCVVEI 663
>ref|XP_002331856.1| predicted protein [Populus trichocarpa] gi|222875374|gb|EEF12505.1|
predicted protein [Populus trichocarpa]
Length = 673
Score = 571 bits (1472), Expect = e-160
Identities = 296/518 (57%), Positives = 396/518 (76%), Gaps = 5/518 (0%)
Frame = +1
Query: 1 EKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSGGPNDL 180
++AK L+GSTLLV E +RP LEEGEFY+RDL+GM+VILK+TG VGTVVNVF++GG NDL
Sbjct: 159 DRAKLLVGSTLLVREYERPELEEGEFYSRDLIGMRVILKETGECVGTVVNVFDNGG-NDL 217
Query: 181 LQVMLNSSDEAHDATGSSE-AGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPKGLLEL 357
LQVML +S + TG S+ A GVSGHLAWVPFV+AIVPDV+MN REMRITPPKGLLEL
Sbjct: 218 LQVMLYTSSDVPGGTGKSKPAEAGVSGHLAWVPFVEAIVPDVNMNEREMRITPPKGLLEL 277
Query: 358 NLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNLLADH 537
NLR D RSKKERR+LEW+ERKK RRLIAAKKKL EMEQKH+F GLR+G+K++R LLAD
Sbjct: 278 NLRQDERSKKERRELEWRERKKFQRRLIAAKKKLCEMEQKHVFDGLRYGDKSKRGLLADQ 337
Query: 538 IVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDNMDTT 717
IVG+N KL Q AL+N E + R + +E ISA TK +++ + +S+E I+C ++ +
Sbjct: 338 IVGVNSKLLQQALENIEISSKRCSATELISATRTKHIKSSLMISKE-FITCANEEKLGAN 396
Query: 718 EGMKIKGLNMISEGKAAIVLVVSDQTSQGRFSNLEQGDSGRAENSSNISHIQALLNDELE 897
++ KGL++IS GK AIVLV++D +G+ N DS +ENS + +Q L+D+
Sbjct: 397 FKLQEKGLSLISTGKVAIVLVLND-IEKGKGDNPGVVDSESSENSL-LFFLQKSLSDDQT 454
Query: 898 ----GDRGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNSVEEEH 1065
DR +PL++V PA E Q++Q+ F ++DYF+F+++KVWFLEEE +PVVS+S EE
Sbjct: 455 FVKIEDRVSVPLILVCPAQEIQSLQKLFSNNDYFAFDSNKVWFLEEEKIPVVSSSEEEGK 514
Query: 1066 RHKVLMKTQWEILQSPVGSGGIFSLLSSHTILEDLNEIGVEYVQVCSLGKRSIVGNPLFF 1245
RHK++MK+ WEILQSPVGSGG+ SLLSS I E+L+++GVEY+++CS + + G+PL
Sbjct: 515 RHKIMMKSPWEILQSPVGSGGVISLLSSVNIPENLSKMGVEYIEICSSSQNCVTGSPLLL 574
Query: 1246 GYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSHVEMID 1425
G+V+SR+A++GIKI + + E+ F++IFSL +++ + +Q KL+F+AI K N HVEM+
Sbjct: 575 GFVESRKAEIGIKIVEDTKDLEESFDMIFSLNFMRLLAQQIHKLQFYAIPKPNLHVEMVG 634
Query: 1426 KEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 1539
KEWVDVVP SPNSYEL SI SSL+ CP ++ICVME+T
Sbjct: 635 KEWVDVVPSSPNSYELRSSIYSSLNACPLEKICVMEIT 672
>ref|XP_002519751.1| conserved hypothetical protein [Ricinus communis]
gi|223541168|gb|EEF42724.1| conserved hypothetical
protein [Ricinus communis]
Length = 631
Score = 568 bits (1464), Expect = e-159
Identities = 290/518 (55%), Positives = 388/518 (74%), Gaps = 5/518 (0%)
Frame = +1
Query: 1 EKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSGGPNDL 180
E+A+QL+GSTLLV E+DRP LEEG+FYTRDLVGM+VILK+TG VGTVVNVF+SG DL
Sbjct: 115 EQARQLVGSTLLVREDDRPELEEGDFYTRDLVGMRVILKETGQCVGTVVNVFDSGA-GDL 173
Query: 181 LQVMLNSSDEAHDATGS-SEAGPGVSGHLAWVPFVKAIVPDVDMNRREMRITPPKGLLEL 357
LQVML ++ + T A GVS L WVPFV+AIVPDVDM +REM ITPPKGLL+L
Sbjct: 174 LQVMLCPTEGVPEGTEKLMTAETGVSSPLVWVPFVEAIVPDVDMTKREMWITPPKGLLKL 233
Query: 358 NLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNLLADH 537
N+RSD RSKKERRQLEWKERKK RRLIAAKKKL EMEQKH+F GLR+GEK QR+ LAD
Sbjct: 234 NIRSDERSKKERRQLEWKERKKFQRRLIAAKKKLCEMEQKHVFDGLRYGEKPQRSSLADQ 293
Query: 538 IVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDNMDTT 717
IVG+N KL Q ALQN RW ++E ISA TKL++ +K+S++CL C T++++
Sbjct: 294 IVGVNSKLLQQALQNIGISFQRWGITELISATRTKLIQRSLKLSKKCLTPCATEESLTAY 353
Query: 718 EGMKIKGLNMISEGKAAIVLVVSDQTSQGRFSNLEQGDSGRAENSSNISHIQALLNDELE 897
M+ KGLN++S GK IVLVV++ G + + D+ +E+ + S +Q L+D+
Sbjct: 354 FDMQDKGLNLLSTGKVGIVLVVNEVDKNGTSHSPDVVDTKNSEDLA-FSLLQKSLSDDQS 412
Query: 898 ----GDRGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNSVEEEH 1065
DR F+PLV+V P E +++++ F D+DYF F+TDKVWFLEEE LPVV++S EE
Sbjct: 413 FLKMEDRAFVPLVLVCPMQEIRSLKKLFSDNDYFGFDTDKVWFLEEEKLPVVNSSYEEPS 472
Query: 1066 RHKVLMKTQWEILQSPVGSGGIFSLLSSHTILEDLNEIGVEYVQVCSLGKRSIVGNPLFF 1245
R K+LMK+ WEILQ PVGSGG+ SLLS+H I E LN++ V+Y++VCS+G+ +++GN L
Sbjct: 473 RCKILMKSPWEILQVPVGSGGVISLLSTHGIPEILNKMDVKYIEVCSVGQNNVLGNALLL 532
Query: 1246 GYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAITKQNSHVEMID 1425
GYV S +A++G++I + SE+ F++IFS +K++T++ DKL+FH I+K NS+VE++D
Sbjct: 533 GYVNSCKAEIGLQIFEDTEGSEESFDMIFSNSSMKRLTEEMDKLQFHTISKPNSYVELVD 592
Query: 1426 KEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEVT 1539
KEW D++P SPNSY+ + SI S+L+ CP D+ICV+E+T
Sbjct: 593 KEWTDIIPSSPNSYQFYSSIYSALNGCPLDKICVIEIT 630
>ref|XP_003629892.1| Ribosome maturation factor rimM [Medicago truncatula]
gi|355523914|gb|AET04368.1| Ribosome maturation factor
rimM [Medicago truncatula]
Length = 667
Score = 507 bits (1306), Expect = e-141
Identities = 267/527 (50%), Positives = 373/527 (70%), Gaps = 15/527 (2%)
Frame = +1
Query: 1 EKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSGGPNDL 180
E+AK LIG+TLLVTEEDRP LEEGEFYT DL GM+V +K+ G +GTV+NVFN+G NDL
Sbjct: 142 EEAKILIGATLLVTEEDRPELEEGEFYTHDLNGMRVFMKENGKLLGTVINVFNNGA-NDL 200
Query: 181 LQVMLNSSDEAHDATGSSEAGP-GVSGHLAWVPFVKAIVPDVDMNRREMRITPPKGLLEL 357
LQ+ L+SS + D G + SG L VPFV+AIVPDVDMNRREM ITPPKGLLEL
Sbjct: 201 LQISLDSSFDVLDKNGKPKPEEIEASGQLVLVPFVEAIVPDVDMNRREMHITPPKGLLEL 260
Query: 358 NLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNLLADH 537
NLR D RSKKERRQLEWKERKK +RLIAAKKKL EM+Q+H+FHG + GEK Q +LL+D
Sbjct: 261 NLRFDDRSKKERRQLEWKERKKFQKRLIAAKKKLREMDQQHVFHGFQCGEKEQWSLLSDQ 320
Query: 538 IVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDNMDTT 717
IVG+N +L Q+ALQ+ E RWN +E +SA K + +++SE L++ +
Sbjct: 321 IVGVNSRLLQEALQSLEQPANRWNAAELVSAMEEKRIRT-VQISERSLLTGSKTKLVRNI 379
Query: 718 EGMKIKGLNMISEGKAAIVLVVSDQTSQGRFSNLEQGDSGRAENSSNISHIQALLNDELE 897
MK KG+ +IS GK AIVL++ ++ ++G + E ++ A +S + +Q LL+D +
Sbjct: 380 INMKEKGVELISNGKMAIVLLLKEKENEGCIYDPEVVEN-EATETSTLHMLQNLLSDHEK 438
Query: 898 ----GDRGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKV----------WFLEEENLP 1035
DR +PL++VS A + Q+++ F +++F+F+++KV WFLEEE LP
Sbjct: 439 FVKVNDRVSVPLILVSSAQQIQSLRNLFTRNNHFAFDSEKVHIISSTFPFVWFLEEEKLP 498
Query: 1036 VVSNSVEEEHRHKVLMKTQWEILQSPVGSGGIFSLLSSHTILEDLNEIGVEYVQVCSLGK 1215
VVS+S+E ++++K+LMK+ WEILQSPVGSGG SL S H+I ++L +GVEY+++C +
Sbjct: 499 VVSSSLEGQNKYKILMKSPWEILQSPVGSGGFISLFSKHSITDNLINMGVEYLELCCPCE 558
Query: 1216 RSIVGNPLFFGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDKLKFHAIT 1395
RS+ GN L G V +REA +GI+I + + +++F++I S++++KK+TKQS KL+F A
Sbjct: 559 RSVGGNSLLVGLVDAREAKIGIQISPTIADPDENFDMILSMEFVKKLTKQSYKLRFDATA 618
Query: 1396 KQNSHVEMIDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1536
K NS +E +DK+WV V +PNSYEL CS+ SSL+ CP D++C++EV
Sbjct: 619 KTNSFIESVDKDWVTVTSSTPNSYELSCSVYSSLNACPLDKVCIVEV 665
>dbj|BAE71246.1| hypothetical protein [Trifolium pratense]
Length = 669
Score = 485 bits (1249), Expect = e-134
Identities = 262/519 (50%), Positives = 368/519 (70%), Gaps = 7/519 (1%)
Frame = +1
Query: 1 EKAKQLIGSTLLVTEEDRPVLEEGEFYTRDLVGMKVILKDTGLSVGTVVNVFNSGGPNDL 180
E+AK LIG+TLLVTEED+P LE+GEFY DL GM+V +K+ G +GTV+NVFN+G NDL
Sbjct: 153 EEAKMLIGATLLVTEEDKPELEDGEFYAHDLNGMRVFMKENGKLLGTVINVFNTGA-NDL 211
Query: 181 LQVMLNSSDEAHDATGSSEAGP-GVSGHLAWVPFVKAIVPDVDMNRREMRITPPKGLLEL 357
LQ+ L+SS + D G + SG L +PFV+AIV DVDMN+REM ITPPKGLLE+
Sbjct: 212 LQISLDSSFDVLDKNGQPKPEEIDASGQLVLLPFVEAIVSDVDMNKREMHITPPKGLLEI 271
Query: 358 NLRSDIRSKKERRQLEWKERKKASRRLIAAKKKLSEMEQKHIFHGLRFGEKAQRNLLADH 537
NLR D +SKKERRQLEWKE+KK RRLIAAKKKL EM+Q+H+FHG + GEK Q +LL+D
Sbjct: 272 NLRFDDKSKKERRQLEWKEKKKFQRRLIAAKKKLCEMDQQHVFHGYQCGEKEQWSLLSDQ 331
Query: 538 IVGINFKLFQDALQNFETVTTRWNLSEFISAYSTKLLENPIKVSEECLISCGTKDNM-DT 714
IVG+N +L QDALQ+ + RWN +E +SA K + + +K+SE+ L++ G+KD +
Sbjct: 332 IVGVNSRLLQDALQSLQQPAKRWNAAELVSAVQEKHI-STLKISEKSLLT-GSKDKLVRN 389
Query: 715 TEGMKIKGLNMISEGKAAIVLVVSDQTSQGRFSNLEQGDSGRAENSSNISHIQALLNDEL 894
M+ KGL +IS+GK AIVL+++++ ++G + + +S EN + + +Q LL D
Sbjct: 390 IIKMQEKGLELISKGKMAIVLLLNEKENEGCIYDPDVVESEATENPT-LLMLQNLLCDHD 448
Query: 895 E----GDRGFLPLVMVSPAHETQAIQQSFLDHDYFSFNTDKVWFLEEENLPVVSNSVEEE 1062
+ DR +PL++VS A + Q+++ F +++F F+++KVWFLEEE LPVVS S+ EE
Sbjct: 449 KFVKVKDRLSVPLILVSSAQQLQSLRNLFARNNHFEFDSEKVWFLEEEKLPVVSRSLGEE 508
Query: 1063 HRHKVLMKTQWEILQSPVGSGGIFSLLSSHTILEDLNEIGVEYVQVCSLGKRSIVGNPLF 1242
+++K+LMK+ WEILQSPVGSGG L + H+I ++L +GVEYV+VC + ++ GN
Sbjct: 509 NKYKILMKSPWEILQSPVGSGGFIDLFTKHSIADNLINMGVEYVEVCCPCETTVGGNSQL 568
Query: 1243 FGYVKSREADLGIKICKSNGESEDDFNVIFSLKYLKKITKQSDK-LKFHAITKQNSHVEM 1419
G V SREA +GI+I +++F++I S+ +KK+TKQS K L+F A K +S VE
Sbjct: 569 LGLVNSREAKIGIQISPKIVVPDENFDMILSMDLVKKLTKQSYKLLQFDATPKISSFVEN 628
Query: 1420 IDKEWVDVVPQSPNSYELHCSICSSLSVCPPDRICVMEV 1536
+DK+WV + PNSYEL CSI SSL+ CP D++C++EV
Sbjct: 629 VDKDWVTITSSIPNSYELSCSIYSSLNACPLDKVCIVEV 667