BLASTX nr result

ID: Coptis23_contig00015838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015838
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24703.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]...   112   4e-23
ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus...   103   1e-20
ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20

>emb|CBI24703.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255 ILWNVDELDKTIAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSIEAGKEQNNT- 79
           I W VDELDKTI+VAA+DPA++ IDEVEL+KR+RWTSTA TQV+ V+KS+ AGKE N T 
Sbjct: 107 IEWQVDELDKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTG 166

Query: 78  ISNVNGMRQELMRFPNGSLYQASRSN 1
            +NVNGMR+E+MR  N   +QA RSN
Sbjct: 167 TANVNGMRREMMRMSNP--HQADRSN 190


>ref|XP_003632086.1| PREDICTED: syntaxin-61-like [Vitis vinifera]
           gi|147821239|emb|CAN72346.1| hypothetical protein
           VITISV_034578 [Vitis vinifera]
          Length = 247

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/86 (66%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255 ILWNVDELDKTIAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSIEAGKEQNNT- 79
           I W VDELDKTI+VAA+DPA++ IDEVEL+KR+RWTSTA TQV+ V+KS+ AGKE N T 
Sbjct: 53  IEWQVDELDKTISVAAKDPAWYGIDEVELDKRRRWTSTAHTQVSNVKKSVVAGKESNGTG 112

Query: 78  ISNVNGMRQELMRFPNGSLYQASRSN 1
            +NVNGMR+E+MR  N   +QA RSN
Sbjct: 113 TANVNGMRREMMRMSNP--HQADRSN 136


>ref|XP_002305773.1| predicted protein [Populus trichocarpa] gi|222848737|gb|EEE86284.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/86 (61%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255 ILWNVDELDKTIAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSIEAGKEQN-NT 79
           I W VDELDK I+VAARDP+++ IDE ELEKR+RWTSTARTQV  V+K++ AGKE N + 
Sbjct: 53  IEWQVDELDKAISVAARDPSWYGIDEAELEKRRRWTSTARTQVGNVKKAVVAGKELNLSG 112

Query: 78  ISNVNGMRQELMRFPNGSLYQASRSN 1
            ++VNGMR+ELMR P+    Q  +SN
Sbjct: 113 TASVNGMRRELMRMPDAQ--QTDKSN 136


>ref|XP_004145007.1| PREDICTED: syntaxin-61-like [Cucumis sativus]
           gi|449474827|ref|XP_004154296.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
           gi|449498935|ref|XP_004160675.1| PREDICTED:
           syntaxin-61-like [Cucumis sativus]
          Length = 246

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/85 (63%), Positives = 64/85 (75%)
 Frame = -2

Query: 255 ILWNVDELDKTIAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSIEAGKEQNNTI 76
           I W VDELDK IAVAARDP+++ ID  ELEKR+RWTSTARTQV  V+K + AGKEQ  T 
Sbjct: 53  IEWQVDELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQIGTA 112

Query: 75  SNVNGMRQELMRFPNGSLYQASRSN 1
           S  +GMR+ELMR PN   ++  RSN
Sbjct: 113 S-ASGMRRELMRLPNA--HETDRSN 134


>ref|XP_002331940.1| predicted protein [Populus trichocarpa] gi|222874717|gb|EEF11848.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -2

Query: 255 ILWNVDELDKTIAVAARDPAFFSIDEVELEKRKRWTSTARTQVATVRKSIEAGKEQN-NT 79
           I W VDELDK I+VA RDP+++ IDE ELEKR+RWTSTAR QV  V+K++ AG+E N + 
Sbjct: 53  IEWQVDELDKAISVAGRDPSWYGIDEAELEKRRRWTSTARNQVGNVKKAVVAGREVNISG 112

Query: 78  ISNVNGMRQELMRFPNGSLYQASRSN 1
            ++V+GMR+ELMR PN    QA +SN
Sbjct: 113 TASVSGMRRELMRMPNSQ--QADKSN 136


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