BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015828
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...    68   1e-09
ref|XP_002326678.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI40923.3| unnamed protein product [Vitis vinifera]               61   1e-07
emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]    61   1e-07
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...    59   4e-07

>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
           gi|223536320|gb|EEF37970.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1744

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/57 (50%), Positives = 41/57 (71%)
 Frame = +2

Query: 389 GTQPSDLQSFIWRAFIPVMKIVNANEHDLLGLIAEQISDVVTKSNTWEVIEASLVPF 559
           G  P  +QS IW+ FIP+MK+ +A E ++L  IAE   DVV  +N+W+V+EA+LVPF
Sbjct: 78  GADPDSMQSLIWKCFIPLMKMAHALEREMLNQIAESFFDVVNVTNSWDVLEATLVPF 134


>ref|XP_002326678.1| predicted protein [Populus trichocarpa] gi|222834000|gb|EEE72477.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +1

Query: 16  SVVTSLTKSFNTVPSAAIPSILDCIXXXXXXXXXXXXXXXXDNFSIHIKIFFEEDHGKMD 195
           S+++SL+ SF  VP AA+P++LDCI                D+FS  IK   E+D  K+D
Sbjct: 11  SIISSLSDSFKQVPLAALPAMLDCILASTGLSPSALFASLLDSFSKFIKDVREKDL-KLD 69

Query: 196 SAQCGYISSFTNALCYLLNK 255
           S+ C YI+S   +LC+LLNK
Sbjct: 70  SSMCNYITSMVGSLCHLLNK 89


>emb|CBI40923.3| unnamed protein product [Vitis vinifera]
          Length = 6988

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +2

Query: 386 AGTQPSDLQSFIWRAFIPVMKIVNANEHDLLGLIAEQISDVVTKSNTWEVIEASLVPF 559
           +G      QSF W+ FIP+MKIV+A + ++L    E   DVV K+N+W V+E +LVPF
Sbjct: 82  SGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVVIKTNSWGVLEETLVPF 139



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +1

Query: 13  SSVVTSLTKSFNTVPSAAIPSILDCIXXXXXXXXXXXXXXXXDNFSIHIKIFFEEDHGKM 192
           +S+V+SL+ SF  VP A IP++LDCI                D F    K    +D  K+
Sbjct: 2   ASLVSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDI-AKDGKKL 60

Query: 193 DSAQCGYISSFTNALCYLLNKSG 261
           DS QC ++SSF   +C+LL KSG
Sbjct: 61  DSDQCNHVSSFVCGVCHLLEKSG 83


>emb|CAN83063.1| hypothetical protein VITISV_010308 [Vitis vinifera]
          Length = 988

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +2

Query: 386 AGTQPSDLQSFIWRAFIPVMKIVNANEHDLLGLIAEQISDVVTKSNTWEVIEASLVPF 559
           +G      QSF W+ FIP+MKIV+A + ++L    E   DVV K+N+W V+E +LVPF
Sbjct: 82  SGVNSDAFQSFTWKCFIPLMKIVHACDREMLNQTTESFVDVVIKTNSWGVLEETLVPF 139



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/83 (39%), Positives = 45/83 (54%)
 Frame = +1

Query: 13  SSVVTSLTKSFNTVPSAAIPSILDCIXXXXXXXXXXXXXXXXDNFSIHIKIFFEEDHGKM 192
           +S+V+SL+ SF  VP A IP++LDCI                D F    K    +D  K+
Sbjct: 2   ASLVSSLSNSFRQVPQAGIPAMLDCILAATASSPSSLFALLLDAFHDLTKDI-AKDGKKL 60

Query: 193 DSAQCGYISSFTNALCYLLNKSG 261
           DS QC ++SSF   +C+LL KSG
Sbjct: 61  DSDQCNHVSSFVCGVCHLLEKSG 83


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 22/57 (38%), Positives = 40/57 (70%)
 Frame = +2

Query: 389 GTQPSDLQSFIWRAFIPVMKIVNANEHDLLGLIAEQISDVVTKSNTWEVIEASLVPF 559
           G  P+ L+SFIW++F+P++        ++L  ++E   DVVT++N+W ++EA+L+PF
Sbjct: 83  GADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFIDVVTETNSWPIVEATLIPF 139