BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015827
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40588.3| unnamed protein product [Vitis vinifera]              155   7e-36
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...   155   7e-36
ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...   137   6e-31
ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac...   137   2e-30
ref|NP_001052061.1| Os04g0118900 [Oryza sativa Japonica Group] g...   129   4e-28

>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  155 bits (392), Expect = 7e-36
 Identities = 73/99 (73%), Positives = 86/99 (86%)
 Frame = -2

Query: 674 FAFVQFDTQEEATKALEYTHMSKILDRMVSVEYALKDDSERDNSPPRRGYGRRDDSPYGR 495
           FAFVQ++TQE+ATKALE THMSKILDR+VSVEYAL+DDS++ +SP R GY RR +SPYGR
Sbjct: 112 FAFVQYETQEDATKALECTHMSKILDRVVSVEYALRDDSDKYDSPRRGGYSRRGESPYGR 171

Query: 494 SRSPVYRRNRPSPDYGRARSPIYDRYGGSSYNRDRSPVY 378
           S SPV RR RPSPDYGRA+SP+YDRY G +Y R+RSP Y
Sbjct: 172 SPSPVNRRGRPSPDYGRAQSPVYDRYNGPAYERNRSPEY 210


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score =  155 bits (392), Expect = 7e-36
 Identities = 73/99 (73%), Positives = 86/99 (86%)
 Frame = -2

Query: 674 FAFVQFDTQEEATKALEYTHMSKILDRMVSVEYALKDDSERDNSPPRRGYGRRDDSPYGR 495
           FAFVQ++TQE+ATKALE THMSKILDR+VSVEYAL+DDS++ +SP R GY RR +SPYGR
Sbjct: 129 FAFVQYETQEDATKALECTHMSKILDRVVSVEYALRDDSDKYDSPRRGGYSRRGESPYGR 188

Query: 494 SRSPVYRRNRPSPDYGRARSPIYDRYGGSSYNRDRSPVY 378
           S SPV RR RPSPDYGRA+SP+YDRY G +Y R+RSP Y
Sbjct: 189 SPSPVNRRGRPSPDYGRAQSPVYDRYNGPAYERNRSPEY 227


>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537387|gb|EEF39015.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 259

 Score =  137 bits (346), Expect(2) = 6e-31
 Identities = 73/101 (72%), Positives = 82/101 (81%), Gaps = 2/101 (1%)
 Frame = -2

Query: 674 FAFVQFDTQEEATKALEYTHMSKILDRMVSVEYALKDDSER--DNSPPRRGYGRRDDSPY 501
           FAFVQF+TQE+ATKALE THM+KILDR+VSVEYAL+DDSER   +  PRRG      S Y
Sbjct: 130 FAFVQFETQEDATKALECTHMTKILDRVVSVEYALRDDSERGDKSDSPRRG------SHY 183

Query: 500 GRSRSPVYRRNRPSPDYGRARSPIYDRYGGSSYNRDRSPVY 378
           GRS SPVYRR RPSPDYGRARSP+YD+Y G SY+R RSP Y
Sbjct: 184 GRSPSPVYRR-RPSPDYGRARSPVYDKYNGPSYDRRRSPEY 223



 Score = 22.3 bits (46), Expect(2) = 6e-31
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 358 HQFEDRGHEE 329
           HQFED  HEE
Sbjct: 246 HQFEDHEHEE 255


>ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus] gi|449477961|ref|XP_004155176.1| PREDICTED:
           arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus]
          Length = 253

 Score =  137 bits (345), Expect = 2e-30
 Identities = 76/104 (73%), Positives = 81/104 (77%), Gaps = 5/104 (4%)
 Frame = -2

Query: 674 FAFVQFDTQEEATKALEYTHMSKILDRMVSVEYALKDDSER----DNSPPRR-GYGRRDD 510
           FAFVQF+TQE+ATKALE THMSKILDR+VSVEYAL+DD ER    D SP R  GYGR  D
Sbjct: 129 FAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGD 188

Query: 509 SPYGRSRSPVYRRNRPSPDYGRARSPIYDRYGGSSYNRDRSPVY 378
           SPY RS SPV+RR RPSPDYGRA SP YDRY G  Y R RSP Y
Sbjct: 189 SPYRRSPSPVFRR-RPSPDYGRAHSPAYDRYNG-PYERRRSPDY 230


>ref|NP_001052061.1| Os04g0118900 [Oryza sativa Japonica Group]
           gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza
           sativa Japonica Group] gi|113563632|dbj|BAF13975.1|
           Os04g0118900 [Oryza sativa Japonica Group]
           gi|116317923|emb|CAH65946.1| H0716A07.4 [Oryza sativa
           Indica Group] gi|218194243|gb|EEC76670.1| hypothetical
           protein OsI_14641 [Oryza sativa Indica Group]
           gi|222628274|gb|EEE60406.1| hypothetical protein
           OsJ_13581 [Oryza sativa Japonica Group]
          Length = 245

 Score =  129 bits (325), Expect = 4e-28
 Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 5/103 (4%)
 Frame = -2

Query: 674 FAFVQFDTQEEATKALEYTHMSKILDRMVSVEYALKDDSERDN--SPPRRGYGRRDDSPY 501
           FAFVQF+TQEEATKALE TH +K+LDR++SVEYA +DD+ER +     R GYGRRDDSPY
Sbjct: 130 FAFVQFETQEEATKALEATHSTKLLDRVISVEYAFRDDTERGDRYDGARGGYGRRDDSPY 189

Query: 500 GRSRSPVYRRNRPSPDYGRARSPIYDRYGGSSYN---RDRSPV 381
            RS SPVY R+RPSPDYGR RSP+Y  Y  S  N   R RSPV
Sbjct: 190 RRSVSPVY-RSRPSPDYGRQRSPVYGSYDRSPVNDRYRSRSPV 231