BLASTX nr result

ID: Coptis23_contig00015810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015810
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267...    68   7e-10
emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]    68   7e-10
ref|XP_002524522.1| protein with unknown function [Ricinus commu...    64   2e-08
ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana] ...    61   1e-07
gb|AAM60996.1| unknown [Arabidopsis thaliana]                          61   1e-07

>ref|XP_002283379.1| PREDICTED: uncharacterized protein LOC100267416 [Vitis vinifera]
           gi|302142872|emb|CBI20167.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
 Frame = +1

Query: 1   ETDVETKPLMKGTKGLDVLFKEAVGLSXXXXXXXXXXXXXVSNGFVDIYQLKKSLKKIER 180
           E  +      KG K L  LFKEAVGL               S    +  +LKK L+++ER
Sbjct: 37  EDQIPENKTQKGKKPLVDLFKEAVGLREKPE----------SESEGEDRELKKRLRELER 86

Query: 181 EVRMMKGVL--------KNVEKKENGLKKEESEFKAGKLLDTLFKEKSDCEKKVDVTEKG 336
           EVR +K           K  E K++G+ KE+++ K   L       K+   K+ +     
Sbjct: 87  EVRRLKANAVTESETPKKKKELKKDGVLKEQTKPKTSSLYSLFSNGKNRDGKRGESGSLE 146

Query: 337 SKEDGLKQSMT--ELSPEMVSLLHCLHEKGYLKNANFMQSSKFDLSCFSTYYSRTFLQGA 510
            KED  ++ +   +LS +M+  +  LH +GY K+ANF+  S      F   YSR +++ A
Sbjct: 147 KKEDEEEEPVVFKDLSEDMLLFVSHLHREGYFKDANFLPRSGLIYGAFDDSYSRAYIKFA 206


>emb|CAN60929.1| hypothetical protein VITISV_008358 [Vitis vinifera]
          Length = 330

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
 Frame = +1

Query: 1   ETDVETKPLMKGTKGLDVLFKEAVGLSXXXXXXXXXXXXXVSNGFVDIYQLKKSLKKIER 180
           E  +      KG K L  LFKEAVGL               S    +  +LKK L+++ER
Sbjct: 37  EDQIPENKTQKGKKPLVDLFKEAVGLREKPE----------SESEGEDRELKKRLRELER 86

Query: 181 EVRMMKGVL--------KNVEKKENGLKKEESEFKAGKLLDTLFKEKSDCEKKVDVTEKG 336
           EVR +K           K  E K++G+ KE+++ K   L       K+   K+ +     
Sbjct: 87  EVRRLKANAVTESETPKKKKELKKDGVLKEQTKPKTSSLYSLFSNGKNRDGKRGESGSLE 146

Query: 337 SKEDGLKQSMT--ELSPEMVSLLHCLHEKGYLKNANFMQSSKFDLSCFSTYYSRTFLQGA 510
            KED  ++ +   +LS +M+  +  LH +GY K+ANF+  S      F   YSR +++ A
Sbjct: 147 KKEDEEEEPVVFKDLSEDMLLFVSHLHREGYFKDANFLPRSGLIYGAFDDSYSRAYIKFA 206


>ref|XP_002524522.1| protein with unknown function [Ricinus communis]
           gi|223536196|gb|EEF37849.1| protein with unknown
           function [Ricinus communis]
          Length = 299

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 55/163 (33%), Positives = 79/163 (48%)
 Frame = +1

Query: 22  PLMKGTKGLDVLFKEAVGLSXXXXXXXXXXXXXVSNGFVDIYQLKKSLKKIEREVRMMKG 201
           P  +  K L +LF+EAVG                SN      ++KK L ++ERE+R    
Sbjct: 32  PTDQNKKPLHLLFQEAVGFRAKPETDIETETQ--SN------EVKKKLWELEREIRH--- 80

Query: 202 VLKNVEKKENGLKKEESEFKAGKLLDTLFKEKSDCEKKVDVTEKGSKEDGLKQSMTELSP 381
            LK  E K N    + ++ K  K L  LF  K   EK    TE+   E  L  ++ ELSP
Sbjct: 81  -LKEAEPKNN---TKVAQPKKTKSLYGLFTGKEIAEKVE--TERKKLEGPL--NLKELSP 132

Query: 382 EMVSLLHCLHEKGYLKNANFMQSSKFDLSCFSTYYSRTFLQGA 510
           +M   ++ L+ +GY   ANF ++S  D SCF+  Y R F++ A
Sbjct: 133 DMKMFVNHLYNEGYFTKANFFRNSHIDFSCFNDSYGRDFIKFA 175


>ref|NP_564632.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8671880|gb|AAF78443.1|AC018748_22 Contains similarity
           to H+-ATPase FO-part b-subunit from Lactococcus lactis
           subsp. cremoris gb|AF059739 [Arabidopsis thaliana]
           gi|17386132|gb|AAL38612.1|AF446879_1 At1g53460/T3F20_21
           [Arabidopsis thaliana] gi|15450677|gb|AAK96610.1|
           At1g53460/T3F20_21 [Arabidopsis thaliana]
           gi|332194823|gb|AEE32944.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 314

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 52/157 (33%), Positives = 75/157 (47%)
 Frame = +1

Query: 40  KGLDVLFKEAVGLSXXXXXXXXXXXXXVSNGFVDIYQLKKSLKKIEREVRMMKGVLKNVE 219
           K L V F+EAVGL                N      +LK+ L ++ER++  +K      +
Sbjct: 40  KPLSVFFEEAVGLRPKSETSEIEEEEEEGN------ELKRKLLELERKLIELKKSEPVRK 93

Query: 220 KKENGLKKEESEFKAGKLLDTLFKEKSDCEKKVDVTEKGSKEDGLKQSMTELSPEMVSLL 399
           KK+ G      + +    L  LFK   D EK+V    K  KED ++    EL  EMVS +
Sbjct: 94  KKQKGEVVISEQNEKRHNLYKLFK--GDEEKEVKKHSK-EKEDVIRV-YKELPIEMVSFV 149

Query: 400 HCLHEKGYLKNANFMQSSKFDLSCFSTYYSRTFLQGA 510
             LH++GYL  ANF+   K D+      Y+RTF++ A
Sbjct: 150 RLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFA 186


>gb|AAM60996.1| unknown [Arabidopsis thaliana]
          Length = 314

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 52/157 (33%), Positives = 75/157 (47%)
 Frame = +1

Query: 40  KGLDVLFKEAVGLSXXXXXXXXXXXXXVSNGFVDIYQLKKSLKKIEREVRMMKGVLKNVE 219
           K L V F+EAVGL                N      +LK+ L ++ER++  +K      +
Sbjct: 40  KPLSVFFEEAVGLRPKSETSEIEEEEEEGN------ELKRKLLELERKLIELKKSEPVRK 93

Query: 220 KKENGLKKEESEFKAGKLLDTLFKEKSDCEKKVDVTEKGSKEDGLKQSMTELSPEMVSLL 399
           KK+ G      + +    L  LFK   D EK+V    K  KED ++    EL  EMVS +
Sbjct: 94  KKQKGEVVISEQNEKRHNLYKLFK--GDEEKEVKKHSK-EKEDVIRV-YKELPIEMVSFV 149

Query: 400 HCLHEKGYLKNANFMQSSKFDLSCFSTYYSRTFLQGA 510
             LH++GYL  ANF+   K D+      Y+RTF++ A
Sbjct: 150 RLLHKEGYLNKANFITGEKLDMGNLDEEYARTFVKFA 186


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