BLASTX nr result

ID: Coptis23_contig00015805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015805
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523968.1| interferon-induced GTP-binding protein mx, p...    56   3e-06
ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [M...    55   8e-06
ref|XP_003629868.1| Interferon-induced GTP-binding protein Mx [M...    55   8e-06

>ref|XP_002523968.1| interferon-induced GTP-binding protein mx, putative [Ricinus
           communis] gi|223536695|gb|EEF38336.1| interferon-induced
           GTP-binding protein mx, putative [Ricinus communis]
          Length = 667

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = -1

Query: 414 ERLFEESPSLASRREKLNKSIRVLKQSKDIVSKIMDRIVVHGD 286
           ERL EESPS+A +REKL  SI+VLK+SK+++S+IMD+I  + D
Sbjct: 625 ERLLEESPSVAGKREKLKASIKVLKESKEVLSEIMDKITFYYD 667


>ref|XP_003629867.1| Interferon-induced GTP-binding protein Mx [Medicago truncatula]
           gi|355523889|gb|AET04343.1| Interferon-induced
           GTP-binding protein Mx [Medicago truncatula]
          Length = 678

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/41 (56%), Positives = 37/41 (90%)
 Frame = -1

Query: 414 ERLFEESPSLASRREKLNKSIRVLKQSKDIVSKIMDRIVVH 292
           ERL EESPS++ +REKL++S++VL++SK+ V++IMDRI ++
Sbjct: 637 ERLLEESPSISGKREKLSRSVKVLRESKETVARIMDRIGIY 677


>ref|XP_003629868.1| Interferon-induced GTP-binding protein Mx [Medicago truncatula]
           gi|355523890|gb|AET04344.1| Interferon-induced
           GTP-binding protein Mx [Medicago truncatula]
          Length = 674

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/44 (54%), Positives = 37/44 (84%)
 Frame = -1

Query: 414 ERLFEESPSLASRREKLNKSIRVLKQSKDIVSKIMDRIVVHGDN 283
           ERL EESPS++ +R++L+ S++VL++SK+ V+ IMDRI V+G N
Sbjct: 631 ERLLEESPSISGKRQRLSSSVKVLRESKETVANIMDRIGVYGVN 674


Top