BLASTX nr result

ID: Coptis23_contig00015797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015797
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263...    86   3e-15
emb|CBI23350.3| unnamed protein product [Vitis vinifera]               86   3e-15
gb|AEY85029.1| cohesin subunit [Camellia sinensis]                     73   3e-11
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com...    69   3e-10
ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809...    66   3e-09

>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
          Length = 1335

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/127 (40%), Positives = 71/127 (55%)
 Frame = +3

Query: 3    LRKKAPCTRPEIWVIQKHLLEDEIFNEPLLTGMSVDLIGLQNRIFDVTEFRDSGMNVDRP 182
            +RKKAPCTR EIW+IQK  LEDEIF+EP+ TGMS +L+ L N  +D++  R    N    
Sbjct: 808  VRKKAPCTRLEIWMIQKQFLEDEIFSEPISTGMSAELMSLYNETYDLSTVRVFENNAS-- 865

Query: 183  LSEVPSEVMWSSATSLIGKANTEGPDEPVAAGGGEANESTTTIVLVDSQRCEEHLSDRID 362
             SEV  E+  S   ++  +   EG  E +A       ES  ++V  ++Q  E+H     D
Sbjct: 866  -SEVAKEMELSVKPNVTKEIGEEGSVESLAVRNDGEVESAQSLVQTENQHGEDHSLGIHD 924

Query: 363  SGTQQLT 383
            + TQ  T
Sbjct: 925  NDTQVKT 931


>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/127 (40%), Positives = 71/127 (55%)
 Frame = +3

Query: 3    LRKKAPCTRPEIWVIQKHLLEDEIFNEPLLTGMSVDLIGLQNRIFDVTEFRDSGMNVDRP 182
            +RKKAPCTR EIW+IQK  LEDEIF+EP+ TGMS +L+ L N  +D++  R    N    
Sbjct: 707  VRKKAPCTRLEIWMIQKQFLEDEIFSEPISTGMSAELMSLYNETYDLSTVRVFENNAS-- 764

Query: 183  LSEVPSEVMWSSATSLIGKANTEGPDEPVAAGGGEANESTTTIVLVDSQRCEEHLSDRID 362
             SEV  E+  S   ++  +   EG  E +A       ES  ++V  ++Q  E+H     D
Sbjct: 765  -SEVAKEMELSVKPNVTKEIGEEGSVESLAVRNDGEVESAQSLVQTENQHGEDHSLGIHD 823

Query: 363  SGTQQLT 383
            + TQ  T
Sbjct: 824  NDTQVKT 830


>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
          Length = 1336

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
 Frame = +3

Query: 3    LRKKAPCTRPEIWVIQKHLLEDEIFNEPLLTGMSVDLIGLQNRIFDVTEFRDSGMNVDRP 182
            +RKKAPCT PEIW+IQK  LEDEIF+EP+ TG+S +L  L ++ +D++E R +  +V   
Sbjct: 809  IRKKAPCTHPEIWMIQKGFLEDEIFSEPIFTGLSTELALLNSQTYDLSEIRVTQNDVHDA 868

Query: 183  LSEVPSEVMWSSATSLIGKANTEG---------PDEPVAAGGGEANESTTT-----IVLV 320
              E  ++++  S    +    TE          PD     G G  NES            
Sbjct: 869  FLETAADLILVS--KKVENNPTEAANDMEFSMEPDVNQKTGKGGINESMVVRNNGEAESS 926

Query: 321  DSQRCEEHLSDRIDSGTQQLTRPLTDI 401
            ++Q  EEH+       TQ     + D+
Sbjct: 927  ENQLVEEHVLQSQGHDTQVQMEAIYDV 953


>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
            gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
            putative [Ricinus communis]
          Length = 1247

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3    LRKKAPCTRPEIWVIQKHLLEDEIFNEPLLTGMSVDLIGLQNRIFD-----VTEFRDSGM 167
            LRKKAPCTR EI +IQ+  LEDEIF+EP+LTGMS  L  + +  FD     V E  D+ M
Sbjct: 731  LRKKAPCTRTEILMIQRQFLEDEIFSEPVLTGMSAYLTRMHSEAFDWSGIKVCENDDNNM 790

Query: 168  NVDRPLSEVPSEVMWSSATSLIGK-ANTEGPDEPVAAGGGEANESTTTIVLVDSQRCEEH 344
                 L  V  E    SA  ++ +    EG  EPV        +++   +  D+Q+ E+H
Sbjct: 791  ---ASLEVVNDE---HSARQIVKQDGGMEGSTEPVGCRTDIEEQTSEVSINKDNQQVEDH 844

Query: 345  L 347
            L
Sbjct: 845  L 845


>ref|XP_003533578.1| PREDICTED: uncharacterized protein LOC100809967 [Glycine max]
          Length = 1247

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
 Frame = +3

Query: 3    LRKKAPCTRPEIWVIQKHLLEDEIFNEPLLTGMSVDLIGLQNRIFDVTEFR--DSGMNVD 176
            +RKKAPCTR EI +IQ+  LEDEIF+EP+ T +S DL  L+N  FD+T  +  D G++  
Sbjct: 741  IRKKAPCTRHEILMIQRQFLEDEIFHEPIFTDLSTDLTILRNETFDLTGIKVFDYGLDSS 800

Query: 177  RPLSEVPSEVMWSSATSLIGKANTEGPDEPVAAGGGEANESTTTIVL 317
                    E    + T + G    EG +EP+A    E  E   T V+
Sbjct: 801  SVEKTNDQESYSRTDTEIDG---VEGNNEPMAVQLQENAEVQPTEVV 844


Top