BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015791
         (1418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|2...   548   e-153
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...   546   e-153
ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransf...   518   e-144
ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methy...   508   e-141
ref|NP_188597.1| radical SAM domain-containing protein [Arabidop...   505   e-140

>ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|222847524|gb|EEE85071.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  548 bits (1411), Expect = e-153
 Identities = 270/370 (72%), Positives = 315/370 (85%)
 Frame = +1

Query: 7    MAFRSVFDFGSIKMEFEKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 186
            M   S+FD   ++ EFEKA INT+FIP IWKYVI+NPNCE  ++P LP+ A++       
Sbjct: 1    MGVGSIFDGPDVRAEFEKAGINTHFIPFIWKYVIKNPNCEWDDIPDLPSAAYSLLRSKFK 60

Query: 187  XXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCIS 366
                 VDSV+ SND VTTKLLVKLQNGA+VEAVIMRYD+RLG Y GKPRPGGPR+TLCIS
Sbjct: 61   TSTSSVDSVINSNDGVTTKLLVKLQNGAFVEAVIMRYDTRLGKYCGKPRPGGPRSTLCIS 120

Query: 367  SQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVV 546
            SQVGCKMGCKFCATGSMGFKNNL+SGEIVEQLVHAS L QIRN+VFMGMGEP+NNY+++V
Sbjct: 121  SQVGCKMGCKFCATGSMGFKNNLSSGEIVEQLVHASCLSQIRNVVFMGMGEPLNNYSALV 180

Query: 547  EAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAA 726
            EAVR ++  PFQ+SPKR+T+STVGIIHAINKL  DLP +NLAVSLHAP+QD+RCQIMPAA
Sbjct: 181  EAVRAMSGVPFQLSPKRITVSTVGIIHAINKLHKDLPGLNLAVSLHAPVQDVRCQIMPAA 240

Query: 727  RAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHLLGKLLEMLQVVVNLIPFN 906
            RAFPLEKLM++L++YQKNS QKIF+EYIML G+ND+++HAH LGKLLE   VVVNLIPFN
Sbjct: 241  RAFPLEKLMDALQVYQKNSMQKIFIEYIMLDGVNDEEQHAHQLGKLLETFDVVVNLIPFN 300

Query: 907  PIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDT 1086
            PIGSLS FRTS+E+ V+ FQKILRGV NIRTT+RK+MGQDISGACGQLVVNLP +     
Sbjct: 301  PIGSLSQFRTSSEEKVLRFQKILRGVNNIRTTVRKQMGQDISGACGQLVVNLPDE-KKPP 359

Query: 1087 SSSLTDIEDL 1116
            +  +TDIEDL
Sbjct: 360  NLGVTDIEDL 369


>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
            vinifera] gi|147817733|emb|CAN60150.1| hypothetical
            protein VITISV_044331 [Vitis vinifera]
            gi|296083052|emb|CBI22456.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  546 bits (1407), Expect = e-153
 Identities = 261/372 (70%), Positives = 313/372 (84%)
 Frame = +1

Query: 7    MAFRSVFDFGSIKMEFEKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 186
            MA  S+FD G ++ +F  A I+ NFIP IWKYV+QNPNC+  ++ SLP+ A+        
Sbjct: 1    MAISSIFDGGELRRQFHSAGISPNFIPFIWKYVVQNPNCDWDDITSLPSAAYPLLRSHFK 60

Query: 187  XXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCIS 366
                 + +V++S+DNVTTKLL+KLQNG++VEAVIMRYD+RLG YGGKPRPGGPR+TLCIS
Sbjct: 61   PSTSSLHTVIDSSDNVTTKLLIKLQNGSFVEAVIMRYDTRLGKYGGKPRPGGPRSTLCIS 120

Query: 367  SQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVV 546
            SQVGCKMGCKFCATGSMGFK+NL+SGEIVEQLVHASH  QIRN+VFMGMGEP+NNY+++V
Sbjct: 121  SQVGCKMGCKFCATGSMGFKSNLSSGEIVEQLVHASHFSQIRNVVFMGMGEPLNNYSALV 180

Query: 547  EAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAA 726
            EA+  +   PFQ+SPK++T+STVGIIHAINKL  DLP +NLAVSLHAP+QD+RCQIMPAA
Sbjct: 181  EAIHIMQGSPFQLSPKKITVSTVGIIHAINKLQSDLPNLNLAVSLHAPVQDIRCQIMPAA 240

Query: 727  RAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHLLGKLLEMLQVVVNLIPFN 906
            RAFPLEKLM++LR YQ NS QKIF+EYIML  +ND+++HAH LGKLLE  QVVVNLIPFN
Sbjct: 241  RAFPLEKLMDTLRTYQTNSGQKIFIEYIMLDEVNDEEQHAHQLGKLLETFQVVVNLIPFN 300

Query: 907  PIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDT 1086
            PIG+LS F+TS+EQ V  FQKILRG YNIRTT+RK+MGQDISGACGQLVVN P K S  +
Sbjct: 301  PIGNLSYFKTSSEQKVARFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNQPDKRSTGS 360

Query: 1087 SSSLTDIEDLHI 1122
            +  LTDIEDLH+
Sbjct: 361  AGLLTDIEDLHL 372


>ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransferase RlmN 1-like
            [Cucumis sativus] gi|449495695|ref|XP_004159917.1|
            PREDICTED: dual-specificity RNA methyltransferase RlmN
            1-like [Cucumis sativus]
          Length = 384

 Score =  518 bits (1335), Expect = e-144
 Identities = 258/381 (67%), Positives = 310/381 (81%), Gaps = 11/381 (2%)
 Frame = +1

Query: 13   FRSVFDFGSIKMEFEKAEINTNFIPLIWKYVIQNPNCELSE-----------VPSLPARA 159
            FRS FD G ++ EFEKA I T FIP IWK+++ +PN   +            VPSLP+ A
Sbjct: 4    FRSAFDAGELRTEFEKAGIKTTFIPFIWKHLLHDPNNIFNHNLASEFQWEQVVPSLPSAA 63

Query: 160  HAXXXXXXXXXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPG 339
            ++            V SV++S+D VTTKLL+KLQ+GA+VEAVIMRYD+RLG YGGKPRPG
Sbjct: 64   YSLLRLKFKPLTSTVHSVVDSSDQVTTKLLIKLQSGAFVEAVIMRYDTRLGKYGGKPRPG 123

Query: 340  GPRATLCISSQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGE 519
            G R+TLCISSQVGCKMGC+FCATG+MGFK+NLTSGEIVEQLVHAS   QIRNIVFMGMGE
Sbjct: 124  GLRSTLCISSQVGCKMGCRFCATGTMGFKSNLTSGEIVEQLVHASRFSQIRNIVFMGMGE 183

Query: 520  PMNNYTSVVEAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQD 699
            P+NNY+S+VEAVR + A PF +SPKR+TISTVGIIHAINKL  DLP +NLAVSLHAP+QD
Sbjct: 184  PLNNYSSLVEAVRAMMAPPFLLSPKRITISTVGIIHAINKLHSDLPGLNLAVSLHAPVQD 243

Query: 700  LRCQIMPAARAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHLLGKLLEMLQ 879
            +RCQIMPAARAFPL+KLM++L+ YQK S+QKI +EYIML G+ND+++HAH LGKLLE  Q
Sbjct: 244  IRCQIMPAARAFPLQKLMDALQEYQKKSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQ 303

Query: 880  VVVNLIPFNPIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVN 1059
            V+VNLIPFNPIGS S F+TS+++ V  FQ++LRG YNIRTTIRK+MGQDISGACGQLVV+
Sbjct: 304  VIVNLIPFNPIGSSSQFKTSSDEKVSVFQQVLRGTYNIRTTIRKQMGQDISGACGQLVVS 363

Query: 1060 LPVKGSLDTSSSLTDIEDLHI 1122
            LP + S   SS + DIEDLH+
Sbjct: 364  LPNRSSSKQSSVVPDIEDLHL 384


>ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methyltransferase N 2-like
            [Brachypodium distachyon]
          Length = 382

 Score =  508 bits (1309), Expect = e-141
 Identities = 251/370 (67%), Positives = 302/370 (81%), Gaps = 1/370 (0%)
 Frame = +1

Query: 16   RSVFDFGSIKMEFEKAEINTNFIPLIWKYVIQNPNC-ELSEVPSLPARAHAXXXXXXXXX 192
            RSVFD   I+ EF+ A I+ +FIPLIWKYV+QNP C +L  VPSLPA A+A         
Sbjct: 13   RSVFDAAYIRAEFDGAGISPHFIPLIWKYVLQNPRCGDLDGVPSLPAAAYALLRNKFRPT 72

Query: 193  XXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCISSQ 372
               + +  ES D  TTKLL++LQNG  VEAV+MRYD+RLG Y GKPRPGG R+TLC+SSQ
Sbjct: 73   TSTLTAAAESKDRTTTKLLIRLQNGESVEAVVMRYDTRLGKYDGKPRPGGVRSTLCVSSQ 132

Query: 373  VGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVVEA 552
            VGCKMGC+FCATG+MGFK+NL+SGEIVEQLVHAS   QIRN+VFMGMGEP+NNYT+VVEA
Sbjct: 133  VGCKMGCRFCATGTMGFKSNLSSGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTAVVEA 192

Query: 553  VRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAARA 732
            +  +T  PFQ+SPKR+T+STVGIIH+INK  +DLP +NLAVSLHAP QD+RCQIMPAARA
Sbjct: 193  IHVLTGPPFQLSPKRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCQIMPAARA 252

Query: 733  FPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHLLGKLLEMLQVVVNLIPFNPI 912
            FPL KLMN+L+ YQ  SKQ IF+EYIML G+ND ++HAH LGKLLE  + VVNLIPFNPI
Sbjct: 253  FPLGKLMNALQSYQNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLETFKAVVNLIPFNPI 312

Query: 913  GSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDTSS 1092
            GS S F+TS++QSV  FQK+LRGVY+IRTT+R+EMGQDI+GACGQLVV+LP + S   ++
Sbjct: 313  GSSSNFKTSSDQSVKKFQKVLRGVYSIRTTVRQEMGQDIAGACGQLVVSLPDERSAGGAT 372

Query: 1093 SLTDIEDLHI 1122
             L+DIEDL I
Sbjct: 373  LLSDIEDLRI 382


>ref|NP_188597.1| radical SAM domain-containing protein [Arabidopsis thaliana]
            gi|28393068|gb|AAO41968.1| unknown protein [Arabidopsis
            thaliana] gi|28827394|gb|AAO50541.1| unknown protein
            [Arabidopsis thaliana] gi|332642748|gb|AEE76269.1|
            radical SAM domain-containing protein [Arabidopsis
            thaliana]
          Length = 372

 Score =  505 bits (1301), Expect = e-140
 Identities = 252/370 (68%), Positives = 296/370 (80%)
 Frame = +1

Query: 7    MAFRSVFDFGSIKMEFEKAEINTNFIPLIWKYVIQNPNCELSEVPSLPARAHAXXXXXXX 186
            M  +SVFD   IK EFE A IN  F   IWKYVIQNP+C   E+PSLP+ A++       
Sbjct: 1    MKLKSVFDASEIKSEFESAGINPKFAIQIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFK 60

Query: 187  XXXXXVDSVLESNDNVTTKLLVKLQNGAYVEAVIMRYDSRLGTYGGKPRPGGPRATLCIS 366
                 + S+  S+D  T+KLL+KLQNGA+VEAV+MRYD+RLG  GGKPRPGG R+TLCIS
Sbjct: 61   TLTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCIS 120

Query: 367  SQVGCKMGCKFCATGSMGFKNNLTSGEIVEQLVHASHLCQIRNIVFMGMGEPMNNYTSVV 546
            SQVGCKMGC FCATG+MGFK+NLTSGEIVEQLVHAS +  IRNIVFMGMGEP+NNY +VV
Sbjct: 121  SQVGCKMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIADIRNIVFMGMGEPLNNYNAVV 180

Query: 547  EAVRTITAFPFQISPKRVTISTVGIIHAINKLWDDLPTVNLAVSLHAPIQDLRCQIMPAA 726
            EAVR +   PFQ+SPKR+TISTVGI+HAINKL +DLP V+LAVSLHAP+Q++RCQIMPAA
Sbjct: 181  EAVRVMLNQPFQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLHAPVQEIRCQIMPAA 240

Query: 727  RAFPLEKLMNSLRLYQKNSKQKIFVEYIMLAGINDDKEHAHLLGKLLEMLQVVVNLIPFN 906
            RAFPL+KLM++L+ +QKNS+QKIF+EYIML G+ND ++HAHLLG+LL+  QVV+NLIPFN
Sbjct: 241  RAFPLQKLMDALQTFQKNSQQKIFIEYIMLDGVNDQEQHAHLLGELLKTFQVVINLIPFN 300

Query: 907  PIGSLSCFRTSNEQSVITFQKILRGVYNIRTTIRKEMGQDISGACGQLVVNLPVKGSLDT 1086
            PIGS S F TS+ Q V  FQKILR  Y IRTTIRKEMGQDISGACGQLVVN P       
Sbjct: 301  PIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGACGQLVVNQPDIKKTPG 360

Query: 1087 SSSLTDIEDL 1116
            +  L DIEDL
Sbjct: 361  TVELRDIEDL 370