BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015775
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    67   6e-09
ref|XP_003598103.1| F-box protein [Medicago truncatula] gi|35548...    58   3e-06

>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
           gi|355523149|gb|AET03603.1| F-box family protein
           [Medicago truncatula]
          Length = 234

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
 Frame = -1

Query: 373 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPHFAETHYRWVIQNRCSPCVVLCIL 194
           LP D+I +ILCR+P+K LI Q   VCK+W +L   P FAE H R              + 
Sbjct: 30  LPFDLITDILCRLPVKFLI-QFQCVCKSWNSLISDPKFAEKHCRLSTTRLVHTLTFSNLP 88

Query: 193 FEGVF-GFIDHQVFDNLDTSVPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDPLLCDYP 17
           ++ +   +  H VF +L T+   H +  L+ P+ +   Y +G  NG+LCL    L CDY 
Sbjct: 89  YKHILKSYPLHSVFIDLTTNQTAHPITQLETPS-KYYFYFVGSCNGILCL----LACDYA 143

Query: 16  VFYYI 2
            F  I
Sbjct: 144 GFVSI 148


>ref|XP_003598103.1| F-box protein [Medicago truncatula] gi|355487151|gb|AES68354.1|
           F-box protein [Medicago truncatula]
          Length = 370

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 38/111 (34%), Positives = 58/111 (52%)
 Frame = -1

Query: 373 LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPHFAETHYRWVIQNRCSPCVVLCIL 194
           LP D+I  ILCR+ +K L+ Q   VCK+W +L     FA  H R+       P  ++   
Sbjct: 49  LPFDLIPEILCRLSVK-LLMQFRCVCKSWNSLITDSKFANIHLRF-------PTTLINSY 100

Query: 193 FEGVFGFIDHQVFDNLDTSVPVHFLDFLDEPTFQPKLYIIGFANGLLCLSE 41
             G        VF +L T+V  H +++   P+F   +YI+G  NG+LCL++
Sbjct: 101 PLG-------SVFSDLGTNVIAH-IEYPPNPSFNHYVYIVGSCNGILCLAQ 143