BLASTX nr result

ID: Coptis23_contig00015768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015768
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycin...    92   4e-17
ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti...    92   6e-17
ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|...    86   2e-15
gb|AFK45008.1| unknown [Lotus japonicus]                               86   4e-15
ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15

>ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycine max]
           gi|255644684|gb|ACU22844.1| unknown [Glycine max]
          Length = 378

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/65 (64%), Positives = 55/65 (84%)
 Frame = +1

Query: 10  SCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNS 189
           +CL DWN KDPT LL+LI  LR QY++YQRK+VG++DD+RL FEISTI  REGIE++M+S
Sbjct: 99  NCLSDWNYKDPTRLLTLIQYLRDQYVLYQRKRVGEVDDDRLTFEISTILSREGIEMHMSS 158

Query: 190 GPDKA 204
           G +K+
Sbjct: 159 GAEKS 163


>ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
           gi|302142670|emb|CBI19873.3| unnamed protein product
           [Vitis vinifera]
          Length = 375

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/65 (64%), Positives = 55/65 (84%)
 Frame = +1

Query: 7   KSCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMN 186
           K+ L DWN KDP+ LL+LIHELR  Y+ YQ+K++G++DD+RLKFEISTI  REGIE+YM+
Sbjct: 96  KNSLSDWNSKDPSGLLTLIHELRDLYLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMS 155

Query: 187 SGPDK 201
           SG +K
Sbjct: 156 SGVEK 160


>ref|XP_002510541.1| Protein BRE, putative [Ricinus communis]
           gi|223551242|gb|EEF52728.1| Protein BRE, putative
           [Ricinus communis]
          Length = 362

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/62 (66%), Positives = 52/62 (83%)
 Frame = +1

Query: 16  LCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNSGP 195
           L DWN KDPT LL+LI ELR  Y+ YQ+K+VG++DD+RLKFEISTI  REGIE++M+SG 
Sbjct: 101 LTDWNNKDPTRLLALIEELRDNYMSYQKKRVGEVDDDRLKFEISTILSREGIEMHMSSGF 160

Query: 196 DK 201
           +K
Sbjct: 161 EK 162


>gb|AFK45008.1| unknown [Lotus japonicus]
          Length = 378

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +1

Query: 10  SCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNS 189
           +CL DWN KDPT LL LI  LR QY++YQRK+V  +DDERLKFE+STI  REGIE++ +S
Sbjct: 100 NCLSDWNYKDPTRLLVLIQFLRDQYVLYQRKRVEGVDDERLKFEVSTIVSREGIEMHRSS 159

Query: 190 GPDKA 204
           G +K+
Sbjct: 160 GFEKS 164


>ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|222857177|gb|EEE94724.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/65 (63%), Positives = 53/65 (81%)
 Frame = +1

Query: 7   KSCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMN 186
           K+ L DWN KDPT LL+L+ ELR +Y  YQ K+VG++DD+RLKFEISTI  REGIE++M+
Sbjct: 98  KNSLTDWNNKDPTRLLALVIELRDKYRSYQEKRVGEVDDDRLKFEISTIVSREGIEMHMS 157

Query: 187 SGPDK 201
           SG +K
Sbjct: 158 SGVEK 162


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