BLASTX nr result
ID: Coptis23_contig00015768
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015768 (206 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycin... 92 4e-17 ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti... 92 6e-17 ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|... 86 2e-15 gb|AFK45008.1| unknown [Lotus japonicus] 86 4e-15 ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|2... 86 4e-15 >ref|NP_001242696.1| uncharacterized protein LOC100814793 [Glycine max] gi|255644684|gb|ACU22844.1| unknown [Glycine max] Length = 378 Score = 92.0 bits (227), Expect = 4e-17 Identities = 42/65 (64%), Positives = 55/65 (84%) Frame = +1 Query: 10 SCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNS 189 +CL DWN KDPT LL+LI LR QY++YQRK+VG++DD+RL FEISTI REGIE++M+S Sbjct: 99 NCLSDWNYKDPTRLLTLIQYLRDQYVLYQRKRVGEVDDDRLTFEISTILSREGIEMHMSS 158 Query: 190 GPDKA 204 G +K+ Sbjct: 159 GAEKS 163 >ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera] gi|302142670|emb|CBI19873.3| unnamed protein product [Vitis vinifera] Length = 375 Score = 91.7 bits (226), Expect = 6e-17 Identities = 42/65 (64%), Positives = 55/65 (84%) Frame = +1 Query: 7 KSCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMN 186 K+ L DWN KDP+ LL+LIHELR Y+ YQ+K++G++DD+RLKFEISTI REGIE+YM+ Sbjct: 96 KNSLSDWNSKDPSGLLTLIHELRDLYLSYQKKRIGEVDDDRLKFEISTIVSREGIEMYMS 155 Query: 187 SGPDK 201 SG +K Sbjct: 156 SGVEK 160 >ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|223551242|gb|EEF52728.1| Protein BRE, putative [Ricinus communis] Length = 362 Score = 86.3 bits (212), Expect = 2e-15 Identities = 41/62 (66%), Positives = 52/62 (83%) Frame = +1 Query: 16 LCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNSGP 195 L DWN KDPT LL+LI ELR Y+ YQ+K+VG++DD+RLKFEISTI REGIE++M+SG Sbjct: 101 LTDWNNKDPTRLLALIEELRDNYMSYQKKRVGEVDDDRLKFEISTILSREGIEMHMSSGF 160 Query: 196 DK 201 +K Sbjct: 161 EK 162 >gb|AFK45008.1| unknown [Lotus japonicus] Length = 378 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/65 (63%), Positives = 52/65 (80%) Frame = +1 Query: 10 SCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMNS 189 +CL DWN KDPT LL LI LR QY++YQRK+V +DDERLKFE+STI REGIE++ +S Sbjct: 100 NCLSDWNYKDPTRLLVLIQFLRDQYVLYQRKRVEGVDDERLKFEVSTIVSREGIEMHRSS 159 Query: 190 GPDKA 204 G +K+ Sbjct: 160 GFEKS 164 >ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|222857177|gb|EEE94724.1| predicted protein [Populus trichocarpa] Length = 379 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/65 (63%), Positives = 53/65 (81%) Frame = +1 Query: 7 KSCLCDWNCKDPTMLLSLIHELRVQYIVYQRKKVGQLDDERLKFEISTIHPREGIEVYMN 186 K+ L DWN KDPT LL+L+ ELR +Y YQ K+VG++DD+RLKFEISTI REGIE++M+ Sbjct: 98 KNSLTDWNNKDPTRLLALVIELRDKYRSYQEKRVGEVDDDRLKFEISTIVSREGIEMHMS 157 Query: 187 SGPDK 201 SG +K Sbjct: 158 SGVEK 162