BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015760
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    97   4e-18
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    92   2e-16
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    91   3e-16
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    82   7e-16
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    84   6e-14

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 24/232 (10%)
 Frame = -1

Query: 883 YIRKILLSANPLSEPNFVAMAIHNELNRLSFF----KSLGLPYIQTLVC-DLL*MS*ITK 719
           +IRK++LS++PL + NFV +AI N+ + L++     KS  L       C D++ ++ +  
Sbjct: 164 FIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGM-- 221

Query: 718 ISFMPSARVGRFLLL-----MPMMSFVAPDVLVGKN--YLVESSGELLQVFRDIDYMEEG 560
             F    + G+ ++       P +SF+      G +  YLV S  ELL V R +D   E 
Sbjct: 222 --FYAVNKAGQIVICDISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEF 279

Query: 559 SRDDF-----YFTAGFDVYKL--KGSEWIEVKSLGKRSLFLGDNYSLSLLISDMPGCRLN 401
              D      Y T  F+V++L   G +W+ + +LG ++LF+G+N SLSL  +D  GC  N
Sbjct: 280 DHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGN 339

Query: 400 SIYFTDDNSENYLVDGYGPRDIGVE---DKSIEPL--YPMESKSPIFIQPTM 260
            IY+TDD  +      +G  D+G+    D++IEPL  YP    SP+   P +
Sbjct: 340 CIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPL 391


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 45/273 (16%)
 Frame = -1

Query: 949 HLPPLTAF-------------------AKGSVIGESIQHL--GYIRKILLSANPLSEPNF 833
           HLPPL+ F                   + G V   S++ +   +I+K +LS++P +  +F
Sbjct: 118 HLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF 177

Query: 832 VAMAIHNELNRLSFFKSLG-----LPYIQTLVCDLL*MS*ITKISFMPSARVGRFLLL-- 674
           +A+ I N+   L+  +        L   Q+   D++      +  F    + G   +   
Sbjct: 178 IAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVI----FHRGLFYAVNKYGSIAVCDV 233

Query: 673 ---MPMMSFVAPDVLVGKN--YLVESSGELLQVFRDIDYMEEGSRDD---FYFTAGFDVY 518
               P +S +      G +  YLVES  ELL V R +D   +   D     Y T  F V 
Sbjct: 234 SGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVC 293

Query: 517 KL--KGSEWIEVKSLGKRSLFLGDNYSLSLLISDMPGCRLNSIYFTDDNSENYLVDGYGP 344
           +L  K   W  V SLG R+LFLG+N SLSL   D PGC+ N IY+TDD SE+      G 
Sbjct: 294 RLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 343 RDIGV---EDKSIEPL----YPMESKSPIFIQP 266
           +D+G+   ED SIEPL    + +    P+++ P
Sbjct: 354 QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 84/273 (30%), Positives = 126/273 (46%), Gaps = 45/273 (16%)
 Frame = -1

Query: 949 HLPPLTAF-------------------AKGSVIGESIQHL--GYIRKILLSANPLSEPNF 833
           HLPPL+ F                   + G V   S++ +   +I+K +LS++P +  +F
Sbjct: 118 HLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDF 177

Query: 832 VAMAIHNELNRLSFFKSLG-----LPYIQTLVCDLL*MS*ITKISFMPSARVGRFLLL-- 674
           +A+ I N+   L+  +        L   Q+   D++      +  F    + G   +   
Sbjct: 178 IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVI----FHRGLFYAVNKYGSIAVCDV 233

Query: 673 ---MPMMSFVAPDVLVGKN--YLVESSGELLQVFRDIDYMEEGSRDD---FYFTAGFDVY 518
               P +S +      G +  YLVES  ELL V R +D   +   D     Y T  F V 
Sbjct: 234 SGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVC 293

Query: 517 KL--KGSEWIEVKSLGKRSLFLGDNYSLSLLISDMPGCRLNSIYFTDDNSENYLVDGYGP 344
           +L  K   W  V SLG R+LFLG+N SLSL   D PGC+ N IY+TDD SE+      G 
Sbjct: 294 RLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 343 RDIGV---EDKSIEPL----YPMESKSPIFIQP 266
           +D+G+   ED SIEPL    + +    P+++ P
Sbjct: 354 QDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTP 386


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 82.0 bits (201), Expect(2) = 7e-16
 Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
 Frame = -1

Query: 628 NYLVESSGELLQVFR--DIDYMEEGSRDD--FYFTAGFDVYKLKGS--EWIEVKSLGKRS 467
           +Y V S+G++L + R  D D+ +    +    Y T GF+V+K+      W  V++LG+R 
Sbjct: 253 HYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERV 312

Query: 466 LFLGDNYSLSLLISDMPGCRLNSIYFTDDNSENYLVDGYGPRDIGV---EDKSIEPLYPM 296
           LF+G N SLS   SD  GC  + IYFTDD SE+   D  G  D+GV    DKSIEPL   
Sbjct: 313 LFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDDACGKHDLGVFRLRDKSIEPLPCF 372

Query: 295 ESKS--------PIFIQP 266
              S        PI++ P
Sbjct: 373 NQNSCSRLRWPLPIWVSP 390



 Score = 28.5 bits (62), Expect(2) = 7e-16
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 737 DVINYKDKFYAIRSGGAVFALDAND 663
           DV+NY   F+A+  GG +   DA +
Sbjct: 206 DVVNYNGLFFAVSKGGTIAVCDAGE 230


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 79/235 (33%), Positives = 118/235 (50%), Gaps = 28/235 (11%)
 Frame = -1

Query: 886 GYIRKILLSANPLSEPN--FVAMAIHNELNRLSFFKSLG-----LPYIQTLVCDLL*MS* 728
           G+I+K+++S++PL +    FVAMAI      L++ K+       +   ++   D++  + 
Sbjct: 162 GFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNG 221

Query: 727 ITKISFMPSARVGRFLLL-----MPMMSFVAPDVLVGKN--YLVESSGELLQVFRDIDYM 569
           +    F    + G+ ++       P +SF+     +G +  YLV S   LL V R +D  
Sbjct: 222 L----FYAVNKAGQIVVCDVNGNSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDLD 277

Query: 568 EEGSRDDF-YFTAGFDVYKL--KGSEWIEVKSLGKRSLFLGDNYSLSLLISDMPGCRLNS 398
            E   D F Y TA F+V+KL   G  W  V SLG   LF+G+N SL+L  S + GC  + 
Sbjct: 278 VEF--DIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDC 335

Query: 397 IYFTDDNSENYLVDGYGPRDIGV---EDKSIEPL--YPMESKS------PIFIQP 266
           IY+TDD S N      G  D+G+    D SIEPL  YP  S S      P++I P
Sbjct: 336 IYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISP 390