BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015757
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    91   1e-16
ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    90   2e-16
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...    82   5e-14
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/132 (40%), Positives = 65/132 (49%)
 Frame = -3

Query: 404 QAHFITSGLFRHPFRAXXXXXXXXXXXXXXXXXXXIFQHIRLPDAFCINTVLKAYSSSSL 225
           QA+ I SGLFR PF A                    F+ I  PD  C+N V+KAYS SS+
Sbjct: 392 QAYLIISGLFRKPFVASKVLKVSADYADVNYTILI-FRSIDSPDTVCVNAVIKAYSISSV 450

Query: 224 SHLVAPLYFNLLSKCGFRPNSFTFPPLLISCANSLSTHVGLICHSHAIKFGYHNVVPVHN 45
           +H     YF  L   GF  NSFTFPPL   C        G   H  AIK G  NV+ V N
Sbjct: 451 AHQALVFYFETLRN-GFMCNSFTFPPLFSCCRKXGCVEYGEKFHGQAIKNGVDNVLDVQN 509

Query: 44  SLIHMYASFGLI 9
           S++HMY   G++
Sbjct: 510 SMVHMYGCCGVV 521


>ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g51320-like [Glycine max]
          Length = 560

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 54/130 (41%), Positives = 66/130 (50%)
 Frame = -3

Query: 404 QAHFITSGLFRHPFRAXXXXXXXXXXXXXXXXXXXIFQHIRLPDAFCINTVLKAYSSSSL 225
           QA  +TS LFR+PF A                    F+ I     FC+NTV+K+Y +S  
Sbjct: 78  QALLVTSSLFRNPFLARTVLSRASHLCNFAYTLLI-FRTINSLGTFCVNTVIKSYCNSHA 136

Query: 224 SHLVAPLYFNLLSKCGFRPNSFTFPPLLISCANSLSTHVGLICHSHAIKFGYHNVVPVHN 45
                  YF  L  CGF PNS+TF PL+ SCA       G  CH+ A K G  +V+PV N
Sbjct: 137 PREAIVFYFRSLM-CGFFPNSYTFVPLVASCAKMGCIDSGKECHAQATKNGVDSVLPVQN 195

Query: 44  SLIHMYASFG 15
           SLIHMYA  G
Sbjct: 196 SLIHMYACCG 205


>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/130 (40%), Positives = 66/130 (50%)
 Frame = -3

Query: 404 QAHFITSGLFRHPFRAXXXXXXXXXXXXXXXXXXXIFQHIRLPDAFCINTVLKAYSSSSL 225
           QA  +TS LFR+P+ A                    F+ I   D FC+N V++AYS+S  
Sbjct: 61  QALLVTSSLFRNPYLARTILSRASHLCDVAYTRVI-FRSINSLDTFCVNIVIQAYSNSHA 119

Query: 224 SHLVAPLYFNLLSKCGFRPNSFTFPPLLISCANSLSTHVGLICHSHAIKFGYHNVVPVHN 45
                  YF  L + GF PNS+TF PL+ SCA       G  CH+ A K G  +V+PV N
Sbjct: 120 PREAIVFYFRSLMR-GFFPNSYTFVPLVASCAKMGCIGSGKECHAQATKNGVDSVLPVQN 178

Query: 44  SLIHMYASFG 15
           SLIHMY   G
Sbjct: 179 SLIHMYVCCG 188


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
 Frame = -3

Query: 404 QAHFITSGLFRHPFRAXXXXXXXXXXXXXXXXXXXIFQHIRLP-DAFCINTVLKAYSSSS 228
           Q+  ITS  +R+PF +                    F H   P D FC+NTV+ +Y +S 
Sbjct: 58  QSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLI-FHHFNNPLDTFCVNTVINSYCNSY 116

Query: 227 LSHLVAPLYFNLLSKCGFRPNSFTFPPLLISCANSLSTHVGLICHSHAIKFGYHNVVPVH 48
           + H     YF+ L K GF  NS+TF  L+ +C+       G +CH  A+K G   V+PV 
Sbjct: 117 VPHKAIVFYFSSL-KIGFFANSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLPVE 175

Query: 47  NSLIHMYASFGLI 9
           NSL HMY S G +
Sbjct: 176 NSLAHMYGSCGYV 188


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/124 (38%), Positives = 64/124 (51%)
 Frame = -3

Query: 398 HFITSGLFRHPFRAXXXXXXXXXXXXXXXXXXXIFQHIRLPDAFCINTVLKAYSSSSLSH 219
           H ITSGLF   F A                    F+HI++P+ FC+N V+KAYS S++  
Sbjct: 71  HLITSGLFNDHFWANRVLLQASEFGDIVYTVLI-FRHIKVPNTFCVNRVIKAYSLSTVPL 129

Query: 218 LVAPLYFNLLSKCGFRPNSFTFPPLLISCANSLSTHVGLICHSHAIKFGYHNVVPVHNSL 39
               +YF  L   G RP+S+TF  L  +CA+      G  CH  A K G  +V+ + NSL
Sbjct: 130 EAVFVYFEWLGN-GLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVDSVMVLGNSL 188

Query: 38  IHMY 27
           IHMY
Sbjct: 189 IHMY 192