BLASTX nr result

ID: Coptis23_contig00015746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015746
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314265.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
ref|XP_002529943.1| conserved hypothetical protein [Ricinus comm...   240   1e-61
ref|XP_002328158.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-61
gb|ABK95109.1| unknown [Populus trichocarpa]                          238   3e-61
ref|XP_003540757.1| PREDICTED: serine/threonine-protein phosphat...   234   4e-60

>ref|XP_002314265.1| predicted protein [Populus trichocarpa] gi|222850673|gb|EEE88220.1|
           predicted protein [Populus trichocarpa]
          Length = 830

 Score =  241 bits (616), Expect = 3e-62
 Identities = 122/163 (74%), Positives = 139/163 (85%)
 Frame = +2

Query: 2   NSCLINFLPDRAHVEQLLRYIVEEASVDAESKRVFKFPFVACEIFTCEIDVILKTLVEED 181
           N+ LINFL DRA VEQLLRYI+EE S DAESKR FKFPF+ACEIFTCEIDVILKTLVEE+
Sbjct: 42  NTRLINFLRDRAQVEQLLRYIIEEPSEDAESKRTFKFPFIACEIFTCEIDVILKTLVEEE 101

Query: 182 ELMNLLFSFLEPKHCYSTMLAGYFSKVAVCLMLRKMIQIISYIEANQDVLRRLVDLIGIT 361
           ELMNLLFSFLEP   +S +LAGYFSKV VCLMLRK + +++Y++A+QDV R+LVDLIGIT
Sbjct: 102 ELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMLRKTVSLMNYVQAHQDVFRQLVDLIGIT 161

Query: 362 PIMEVLVRLVCADGHVDTTSMDVMPWLANINLLEMLVDKLNPS 490
            IMEVLVRLV AD HV     DVM WLA+ NLLEM+VDKL+PS
Sbjct: 162 SIMEVLVRLVGADDHVYPNFTDVMQWLADSNLLEMIVDKLSPS 204


>ref|XP_002529943.1| conserved hypothetical protein [Ricinus communis]
           gi|223530573|gb|EEF32451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 845

 Score =  240 bits (612), Expect = 1e-61
 Identities = 121/162 (74%), Positives = 138/162 (85%)
 Frame = +2

Query: 2   NSCLINFLPDRAHVEQLLRYIVEEASVDAESKRVFKFPFVACEIFTCEIDVILKTLVEED 181
           NS LINFL DRA VEQLLRYI+EEA  D ESKR FKFPF+ACEIFTCEIDVILKTLVEE+
Sbjct: 42  NSRLINFLRDRAQVEQLLRYIIEEAPEDTESKRAFKFPFIACEIFTCEIDVILKTLVEEE 101

Query: 182 ELMNLLFSFLEPKHCYSTMLAGYFSKVAVCLMLRKMIQIISYIEANQDVLRRLVDLIGIT 361
           ELMNLLFSFLEP   +S +LAGYFSKV VCLM+RK + +++Y++A+QDV R+LVDLIGIT
Sbjct: 102 ELMNLLFSFLEPNRPHSALLAGYFSKVVVCLMVRKTVPLMNYVQAHQDVFRQLVDLIGIT 161

Query: 362 PIMEVLVRLVCADGHVDTTSMDVMPWLANINLLEMLVDKLNP 487
            IMEVLVRLV AD HV    +DVM WLA+ NLLEM+VDKLNP
Sbjct: 162 SIMEVLVRLVGADDHVYPNFIDVMQWLADSNLLEMIVDKLNP 203


>ref|XP_002328158.1| predicted protein [Populus trichocarpa] gi|222837673|gb|EEE76038.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/163 (74%), Positives = 138/163 (84%)
 Frame = +2

Query: 2   NSCLINFLPDRAHVEQLLRYIVEEASVDAESKRVFKFPFVACEIFTCEIDVILKTLVEED 181
           N+ LINFL DRA VEQLLRYI+EE S DAESK  FKFPF+ACEIFTCEIDVILKTLVEE+
Sbjct: 42  NTRLINFLRDRAQVEQLLRYIIEEPSEDAESKLAFKFPFIACEIFTCEIDVILKTLVEEE 101

Query: 182 ELMNLLFSFLEPKHCYSTMLAGYFSKVAVCLMLRKMIQIISYIEANQDVLRRLVDLIGIT 361
           ELMNLLFSFLEP   +S +LAGYFSKV VCLMLRK + +++Y++A+QDV R+LVDLIGIT
Sbjct: 102 ELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMLRKTVPLMNYVQAHQDVFRQLVDLIGIT 161

Query: 362 PIMEVLVRLVCADGHVDTTSMDVMPWLANINLLEMLVDKLNPS 490
            IMEVLVRLV AD HV     DVM WLA+ NLLEM+VDKL+PS
Sbjct: 162 SIMEVLVRLVGADDHVYPNFTDVMQWLADSNLLEMIVDKLSPS 204


>gb|ABK95109.1| unknown [Populus trichocarpa]
          Length = 840

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/163 (74%), Positives = 138/163 (84%)
 Frame = +2

Query: 2   NSCLINFLPDRAHVEQLLRYIVEEASVDAESKRVFKFPFVACEIFTCEIDVILKTLVEED 181
           N+ LINFL DRA VEQLLRYI+EE S DAESK  FKFPF+ACEIFTCEIDVILKTLVEE+
Sbjct: 42  NTRLINFLRDRAQVEQLLRYIIEEPSEDAESKLAFKFPFIACEIFTCEIDVILKTLVEEE 101

Query: 182 ELMNLLFSFLEPKHCYSTMLAGYFSKVAVCLMLRKMIQIISYIEANQDVLRRLVDLIGIT 361
           ELMNLLFSFLEP   +S +LAGYFSKV VCLMLRK + +++Y++A+QDV R+LVDLIGIT
Sbjct: 102 ELMNLLFSFLEPNRSHSALLAGYFSKVVVCLMLRKTVPLMNYVQAHQDVFRQLVDLIGIT 161

Query: 362 PIMEVLVRLVCADGHVDTTSMDVMPWLANINLLEMLVDKLNPS 490
            IMEVLVRLV AD HV     DVM WLA+ NLLEM+VDKL+PS
Sbjct: 162 SIMEVLVRLVGADDHVYPNFTDVMQWLADSNLLEMIVDKLSPS 204


>ref|XP_003540757.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory
           subunit 3-like [Glycine max]
          Length = 848

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/163 (72%), Positives = 138/163 (84%)
 Frame = +2

Query: 2   NSCLINFLPDRAHVEQLLRYIVEEASVDAESKRVFKFPFVACEIFTCEIDVILKTLVEED 181
           NS LINFL DRA VEQLLRYI+EE   DAE+KRVFKFPF+ACEIFTCEIDVILKTLV+E+
Sbjct: 42  NSRLINFLRDRAQVEQLLRYIIEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEE 101

Query: 182 ELMNLLFSFLEPKHCYSTMLAGYFSKVAVCLMLRKMIQIISYIEANQDVLRRLVDLIGIT 361
           ELMNLLFSFLE    +ST+LAGYFSKV +CLM+RK + +++Y++A+Q V R+LVDLIGIT
Sbjct: 102 ELMNLLFSFLESDRSHSTLLAGYFSKVVICLMIRKTVPLMNYVQAHQHVFRQLVDLIGIT 161

Query: 362 PIMEVLVRLVCADGHVDTTSMDVMPWLANINLLEMLVDKLNPS 490
            IMEVLVRLV AD HV    +DVM WLA  NLLEM+VDKL+PS
Sbjct: 162 SIMEVLVRLVGADDHVYPNFIDVMQWLAESNLLEMIVDKLSPS 204


Top