BLASTX nr result

ID: Coptis23_contig00015738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015738
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V...   264   4e-68
ref|XP_002282409.1| PREDICTED: transcription factor TCP9-like [V...   258   4e-66
emb|CBI38834.3| unnamed protein product [Vitis vinifera]              257   6e-66
emb|CBI34764.3| unnamed protein product [Vitis vinifera]              240   6e-61
gb|ADL36831.1| TCP domain class transcription factor [Malus x do...   230   8e-58

>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 360

 Score =  264 bits (675), Expect = 4e-68
 Identities = 162/297 (54%), Positives = 179/297 (60%), Gaps = 9/297 (3%)
 Frame = +1

Query: 31  PIVAPMPMQMQITKPTTTKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 210
           P+  PMP+Q++   P   KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG
Sbjct: 85  PVAMPMPVQVRRPAPPV-KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 143

Query: 211 ETIRWLLEHAEXXXXXXXXXXXXXXXXMSVGGTLKIPTTSPSQETPTADMNKKKRKRPVT 390
           ETIRWLLEHAE                MSVGGTLKIPTTS +  T   D NKKKRKRP  
Sbjct: 144 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTS-TATTQEPDPNKKKRKRPAN 202

Query: 391 SDFFDPINDGVSVSSGLAPIQASAVSATAYQQHQGLVPMWALGTGGNVNVNMVPSNA--T 564
           S+F D +ND VSVSSGLAPI             QGLVPMWA           +PSNA   
Sbjct: 203 SEFVD-VNDAVSVSSGLAPIATPLAP-------QGLVPMWA-----------IPSNAVGA 243

Query: 565 FWMXXXXXXXXXTGPSNQPQLWTTFTPTVTPLVNISPRPISSFVTTMRPPDVPVPVQTPS 744
           FWM          GPSNQPQ+W TF PT TPL+NIS RPISSFV++M  P + V   T S
Sbjct: 244 FWM--VPPTTAIAGPSNQPQIW-TFPPTATPLINISARPISSFVSSMH-PTINVASATAS 299

Query: 745 PTCALGAKPGK-------PXXXXXXXXXXXXXXXXXQLLRDFSLEIYEKQELQFMGK 894
               +G K  K                         Q+LRDFSLEIY+KQELQFM +
Sbjct: 300 AASTVGVKASKASSTMAPSSTSTATTTTTTTSTTTTQMLRDFSLEIYDKQELQFMSR 356


>ref|XP_002282409.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 387

 Score =  258 bits (658), Expect = 4e-66
 Identities = 162/328 (49%), Positives = 196/328 (59%), Gaps = 22/328 (6%)
 Frame = +1

Query: 4    QQQQMGTLFPIVAPMPMQMQITKPTTT-KRASTKDRHTKVEGRGRRIRMPATCAARIFQL 180
            Q   +G +  I   MPM + +  P ++ +R+STKDRHTKVEGRGRRIR+PATCAARIFQL
Sbjct: 71   QAPSIGVVPVIQMQMPMPIPMPMPVSSGRRSSTKDRHTKVEGRGRRIRIPATCAARIFQL 130

Query: 181  TRELGHKSDGETIRWLLEHAEXXXXXXXXXXXXXXXXMSVGGTLKIPTTSPSQETPTADM 360
            TRELGHKSDGET+RWLLEHAE                +SVGGTLKIPT+S S     A  
Sbjct: 131  TRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTSSSSNPEGEAP- 189

Query: 361  NKKKRKRPVTSDFFDPINDGVSVSSGLAPIQASAVSATAYQQHQGLVPMWALGTGGNVNV 540
              KKRKRP  S+F+D +NDGVSVSSGLAP+ A+AV+A A    QGLVP+WA+G  G    
Sbjct: 190  --KKRKRPANSEFYD-VNDGVSVSSGLAPVGATAVAAAA---PQGLVPIWAVGNAGM--- 240

Query: 541  NMVPSNA----TFWMXXXXXXXXXTGPSNQPQLWTTFTPTVTPLVNISPRPISSFVTTMR 708
             M+P NA    TFWM          GP NQPQLWT  +P+V+P+ N+S RPISSFV+  +
Sbjct: 241  -MIPPNAVAAGTFWMIPPTATPV-AGPPNQPQLWT-ISPSVSPVFNMSARPISSFVSATQ 297

Query: 709  PP-------DVPVP------VQTPSPTCALGAKPGKPXXXXXXXXXXXXXXXXX----QL 837
            P        DV  P          + T   GA+  K                      Q+
Sbjct: 298  PGMNHPPALDVRAPPVLCNSATISATTSTAGARAAKKSTMAPCVSSTTTTTNTSATKPQM 357

Query: 838  LRDFSLEIYEKQELQFMGKHRQQDHQSS 921
            LRDFSLEIY+K+ELQFMG+   Q  QSS
Sbjct: 358  LRDFSLEIYDKKELQFMGRSGNQQTQSS 385


>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  257 bits (656), Expect = 6e-66
 Identities = 157/290 (54%), Positives = 175/290 (60%), Gaps = 2/290 (0%)
 Frame = +1

Query: 31  PIVAPMPMQMQITKPTTTKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 210
           P+  PMP+Q++   P   KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG
Sbjct: 98  PVAMPMPVQVRRPAPPV-KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDG 156

Query: 211 ETIRWLLEHAEXXXXXXXXXXXXXXXXMSVGGTLKIPTTSPSQETPTADMNKKKRKRPVT 390
           ETIRWLLEHAE                MSVGGTLKIPTTS +  T   D NKKKRKRP  
Sbjct: 157 ETIRWLLEHAEPAIIAATGTGTVPAIAMSVGGTLKIPTTS-TATTQEPDPNKKKRKRPAN 215

Query: 391 SDFFDPINDGVSVSSGLAPIQASAVSATAYQQHQGLVPMWALGTGGNVNVNMVPSNA--T 564
           S+F D +ND VSVSSGLAPI             QGLVPMWA           +PSNA   
Sbjct: 216 SEFVD-VNDAVSVSSGLAPIATPLAP-------QGLVPMWA-----------IPSNAVGA 256

Query: 565 FWMXXXXXXXXXTGPSNQPQLWTTFTPTVTPLVNISPRPISSFVTTMRPPDVPVPVQTPS 744
           FWM          GPSNQPQ+W TF PT TPL+NIS RPISSFV++M P      +   S
Sbjct: 257 FWM--VPPTTAIAGPSNQPQIW-TFPPTATPLINISARPISSFVSSMHP-----TINVAS 308

Query: 745 PTCALGAKPGKPXXXXXXXXXXXXXXXXXQLLRDFSLEIYEKQELQFMGK 894
            T +  +                       +LRDFSLEIY+KQELQFM +
Sbjct: 309 ATASAAS----------------------TMLRDFSLEIYDKQELQFMSR 336


>emb|CBI34764.3| unnamed protein product [Vitis vinifera]
          Length = 431

 Score =  240 bits (613), Expect = 6e-61
 Identities = 151/307 (49%), Positives = 182/307 (59%), Gaps = 1/307 (0%)
 Frame = +1

Query: 4   QQQQMGTLFPIVAPMPMQMQITKPTTT-KRASTKDRHTKVEGRGRRIRMPATCAARIFQL 180
           Q   +G +  I   MPM + +  P ++ +R+STKDRHTKVEGRGRRIR+PATCAARIFQL
Sbjct: 155 QAPSIGVVPVIQMQMPMPIPMPMPVSSGRRSSTKDRHTKVEGRGRRIRIPATCAARIFQL 214

Query: 181 TRELGHKSDGETIRWLLEHAEXXXXXXXXXXXXXXXXMSVGGTLKIPTTSPSQETPTADM 360
           TRELGHKSDGET+RWLLEHAE                +SVGGTLKIPT+S S     A  
Sbjct: 215 TRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTSSSSNPEGEA-- 272

Query: 361 NKKKRKRPVTSDFFDPINDGVSVSSGLAPIQASAVSATAYQQHQGLVPMWALGTGGNVNV 540
             KKRKRP  S+F+D +NDGVSVSSGLAP+ A+AV+A A    QGLVP+WA+G  G    
Sbjct: 273 -PKKRKRPANSEFYD-VNDGVSVSSGLAPVGATAVAAAA---PQGLVPIWAVGNAG---- 323

Query: 541 NMVPSNATFWMXXXXXXXXXTGPSNQPQLWTTFTPTVTPLVNISPRPISSFVTTMRPPDV 720
            M+P NA                   PQLW T +P+V+P+ N+S RPISSF T       
Sbjct: 324 MMIPPNA-------------------PQLW-TISPSVSPVFNMSARPISSFSTM-----A 358

Query: 721 PVPVQTPSPTCALGAKPGKPXXXXXXXXXXXXXXXXXQLLRDFSLEIYEKQELQFMGKHR 900
           P    T + T     KP                    Q+LRDFSLEIY+K+ELQFMG+  
Sbjct: 359 PCVSSTTTTTNTSATKP--------------------QMLRDFSLEIYDKKELQFMGRSG 398

Query: 901 QQDHQSS 921
            Q  QSS
Sbjct: 399 NQQTQSS 405


>gb|ADL36831.1| TCP domain class transcription factor [Malus x domestica]
          Length = 343

 Score =  230 bits (586), Expect = 8e-58
 Identities = 147/316 (46%), Positives = 180/316 (56%), Gaps = 28/316 (8%)
 Frame = +1

Query: 43  PMPMQMQITKPTTTKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIR 222
           P+PM +Q+     T+R+STKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGET+R
Sbjct: 42  PVPMSVQLPVSAPTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVR 101

Query: 223 WLLEHAEXXXXXXXXXXXXXXXXMSVGGTLKIPTTSPS--QETPTADMNKKKRKRPVTSD 396
           WLLEHAE                +SVGGTLKIPTTS +  ++  +     KKRKRP  S+
Sbjct: 102 WLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSTSVEDNSSPTSATKKRKRPSNSE 161

Query: 397 FFDPINDGVSVSSGLAPIQASAVSATAYQQHQGLVPMWALGTGGNVNVNMVPSNATFWMX 576
           F D   D VS SSGLAP+  +A         QGLVP+WA+G  G +    VP+NA FWM 
Sbjct: 162 FVDVRKDAVSQSSGLAPVGPAAP--------QGLVPVWAVGGAGLI----VPANA-FWMG 208

Query: 577 XXXXXXXXTGPSNQPQLWTTFTPTVTPLVNISPR--PISSFVTTMRPPDVPVPVQTPSP- 747
                    GP  QPQ+W   +PT+TP+ N++    PISSFV         V V+ PSP 
Sbjct: 209 PVGSGAGSPGP--QPQIWA-LSPTMTPVFNMAGAAGPISSFVVNSGGGAGGVDVRAPSPA 265

Query: 748 -------TCALGAK-----------PGKPXXXXXXXXXXXXXXXXXQLLRDFSLEIYEKQ 873
                  T  +GA+           P                    Q+LRDFSLEIY+KQ
Sbjct: 266 LSNSAASTSTVGARAAKRSSTTMAPPSVSFSSNNSNSSGSGATTKTQMLRDFSLEIYDKQ 325

Query: 874 ELQFMGK-----HRQQ 906
           EL+FMG+     H+QQ
Sbjct: 326 ELKFMGQPIGPAHQQQ 341


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