BLASTX nr result

ID: Coptis23_contig00015721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015721
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   121   5e-26
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...   121   7e-26
ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|3575121...   121   7e-26
ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414...   120   9e-26
gb|AFK45499.1| unknown [Lotus japonicus]                              119   2e-25

>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147815277|emb|CAN70026.1| hypothetical protein
           VITISV_030174 [Vitis vinifera]
          Length = 139

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/68 (88%), Positives = 65/68 (95%)
 Frame = -2

Query: 371 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIAHGGVVPNINPILLPKKTGKGKDD 192
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIA+GGV+PNI+  LLPKKTGKGK +
Sbjct: 72  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKTGKGKGE 131

Query: 191 IGSASQEF 168
           IGSASQEF
Sbjct: 132 IGSASQEF 139


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/68 (88%), Positives = 64/68 (94%)
 Frame = -2

Query: 371 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIAHGGVVPNINPILLPKKTGKGKDD 192
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIA+GGV+PNI+  LLPKK GKGK D
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGD 134

Query: 191 IGSASQEF 168
           IGSASQEF
Sbjct: 135 IGSASQEF 142


>ref|XP_003626340.1| Histone H2A [Medicago truncatula] gi|357512107|ref|XP_003626342.1|
           Histone H2A [Medicago truncatula]
           gi|124360158|gb|ABN08174.1| Histone H2A; Histone-fold
           [Medicago truncatula] gi|124360160|gb|ABN08176.1|
           Histone H2A; Histone-fold [Medicago truncatula]
           gi|355501355|gb|AES82558.1| Histone H2A [Medicago
           truncatula] gi|355501357|gb|AES82560.1| Histone H2A
           [Medicago truncatula] gi|388498640|gb|AFK37386.1|
           unknown [Medicago truncatula]
          Length = 139

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/68 (88%), Positives = 64/68 (94%)
 Frame = -2

Query: 371 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIAHGGVVPNINPILLPKKTGKGKDD 192
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIA+GGV+PNI+  LLPKK GKGK +
Sbjct: 72  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQTLLPKKVGKGKGE 131

Query: 191 IGSASQEF 168
           IGSASQEF
Sbjct: 132 IGSASQEF 139


>ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/68 (88%), Positives = 64/68 (94%)
 Frame = -2

Query: 371 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIAHGGVVPNINPILLPKKTGKGKDD 192
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIA+GGV+PNI+  LLPKK GKGK D
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 134

Query: 191 IGSASQEF 168
           IGSASQEF
Sbjct: 135 IGSASQEF 142


>gb|AFK45499.1| unknown [Lotus japonicus]
          Length = 141

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/68 (86%), Positives = 64/68 (94%)
 Frame = -2

Query: 371 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIAHGGVVPNINPILLPKKTGKGKDD 192
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLG+VTIA+GGV+PNI+  LLPKK GKGK +
Sbjct: 74  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKAGKGKGE 133

Query: 191 IGSASQEF 168
           IGSASQEF
Sbjct: 134 IGSASQEF 141


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