BLASTX nr result

ID: Coptis23_contig00015711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015711
         (1269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512665.1| conserved hypothetical protein [Ricinus comm...   306   1e-80
ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-77
ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267...   291   2e-76
ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|2...   286   1e-74
ref|NP_850213.1| gt-2-related protein [Arabidopsis thaliana] gi|...   273   7e-71

>ref|XP_002512665.1| conserved hypothetical protein [Ricinus communis]
            gi|223548626|gb|EEF50117.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 347

 Score =  306 bits (783), Expect = 1e-80
 Identities = 185/330 (56%), Positives = 216/330 (65%), Gaps = 43/330 (13%)
 Frame = -2

Query: 1112 IHNDEQTSVTVNDDGNRQPRLPRWTRQEILVLIQGKKEAENRVRIRRPAS----TNQVTE 945
            + N    S+   DDG++ PRLPRWTRQEILVLIQGKK AENRVR  R A     + QV E
Sbjct: 22   VDNTRPASIDGADDGSKTPRLPRWTRQEILVLIQGKKVAENRVRRGRTAGMAFGSGQV-E 80

Query: 944  PKWATVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWEVMKSSEDRESFWVMRNDLRR 765
            PKWA+VSSYCKRHGVNRGPVQCRKRWSNLAGD+KKIKEWE     E+ ESFWVMRNDLRR
Sbjct: 81   PKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWE-NHIREETESFWVMRNDLRR 139

Query: 764  ERKLPGFFDREVYDILDG-----------GMDKVVGVLLDRSDGL--------AEDALSS 642
            ERKLPGFFDREV+DILDG           G+   +    + S+ +        AED L S
Sbjct: 140  ERKLPGFFDREVFDILDGAGGVSAAPATPGLALALAPATEDSEAVFDSGRTAAAEDGLFS 199

Query: 641  DFEMSEEEGGGHQDKVTVAK-DCLKSTVPATAAAPL--------------LNSGTTIEKK 507
            DFE  +E+ GG  +K  V +   +K+      AAP+               + G T EK+
Sbjct: 200  DFE--QEDAGGSPEKEAVKEAPPIKAAATGGIAAPVPISEKQYQPAVRTDQSQGATNEKQ 257

Query: 506  NASN--QGSPSQEGQKRKRAPSEDGD---TDLQGQLINVLEKSSILLTAQLEAQNMNCQL 342
              SN   GS   E +KRKR  + DGD   T LQ QLI VLE++  +LTAQLEAQN N QL
Sbjct: 258  PPSNPEMGSGLHESRKRKRFGTTDGDEETTTLQNQLIGVLERNGEMLTAQLEAQNTNFQL 317

Query: 341  DRDQRKDQANSLVTVLSKLADALGRIADKL 252
            DR+QRKDQANSLV VL+KLADALG+IADKL
Sbjct: 318  DREQRKDQANSLVAVLNKLADALGKIADKL 347


>ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|222846609|gb|EEE84156.1|
            predicted protein [Populus trichocarpa]
          Length = 346

 Score =  296 bits (757), Expect = 1e-77
 Identities = 180/319 (56%), Positives = 205/319 (64%), Gaps = 44/319 (13%)
 Frame = -2

Query: 1076 DDGNRQPRLPRWTRQEILVLIQGKKEAENRVRIRRPAS----TNQVTEPKWATVSSYCKR 909
            DDGN+ PRLPRWTRQEILVLIQGK+ AENRVR  R +     + Q+ EPKWA+VSSYCKR
Sbjct: 33   DDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGSGQI-EPKWASVSSYCKR 91

Query: 908  HGVNRGPVQCRKRWSNLAGDFKKIKEWEVMKSSEDRESFWVMRNDLRRERKLPGFFDREV 729
            HGVNRGPVQCRKRWSNLAGDFKKIKEWE     E+ ESFWVMRNDLRRERKLPGFFDREV
Sbjct: 92   HGVNRGPVQCRKRWSNLAGDFKKIKEWET-SIREETESFWVMRNDLRRERKLPGFFDREV 150

Query: 728  YDILDGGMDKVVGVLL---------------------DRSDGLAEDALSSDFEMSEEEGG 612
            YDILDGG   V G+ L                           AED L SDFE  +EEGG
Sbjct: 151  YDILDGGGGTVPGLALALAPSSTAAEAEAVAEEVVFDSGRSAAAEDGLFSDFE--QEEGG 208

Query: 611  GHQDKVTVAKDCLKSTVPATAAAPLLNSGTTI--------------EKKNASN--QGSPS 480
            G  + V      +K  V A  A P   S                  +K+ A+N   GS S
Sbjct: 209  GSPEAVVKEVQPIKMAVTAGVANPTPISEKQYQPAPRASQAQVPPNDKRPATNPEMGSAS 268

Query: 479  QEGQKRKRAPSEDGDTD---LQGQLINVLEKSSILLTAQLEAQNMNCQLDRDQRKDQANS 309
             E +KRKR    DGD +   LQ  LI+VLE++  +LTAQLEAQN N QLDR+QRKD A+ 
Sbjct: 269  HEERKRKRFVI-DGDEETISLQSHLIDVLERNGKMLTAQLEAQNTNFQLDREQRKDHADG 327

Query: 308  LVTVLSKLADALGRIADKL 252
            LV VL+KLA+ALG+IADKL
Sbjct: 328  LVAVLNKLANALGKIADKL 346


>ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267783 [Vitis vinifera]
          Length = 340

 Score =  291 bits (746), Expect = 2e-76
 Identities = 184/349 (52%), Positives = 218/349 (62%), Gaps = 48/349 (13%)
 Frame = -2

Query: 1154 MALKPIDVNVNVVTIHNDEQTSVTVNDDGNRQPRLPRWTRQEILVLIQGKKEAENRVRIR 975
            ++L P  V+ +   + N    +    DDG+R PRLPRWTRQEILVLIQGKK AE+RVR  
Sbjct: 6    LSLAPAPVDDDADAVPNGVNAA---GDDGSRAPRLPRWTRQEILVLIQGKKVAESRVRRG 62

Query: 974  RP---ASTNQVTEPKWATVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWEVMKSSED 804
            R    A  +   EPKWA+VSSYCKRHGVNRGPVQCRKRWSNLAGD+KKIKEWE  +  ++
Sbjct: 63   RTGGLAFGSAQIEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWE-SQIRDE 121

Query: 803  RESFWVMRNDLRRERKLPGFFDREVYDILDG----------------------GM----D 702
             ESFWVMRND+RRE++LPGFFDREVYD+LDG                      GM    +
Sbjct: 122  SESFWVMRNDVRREKRLPGFFDREVYDMLDGVGAAPPGPSGLALGLAPAPEGEGMVAPEE 181

Query: 701  KVVGVLLDRSDGLAEDALSSDFEMSEEEGGGHQDKVTVAKDCLKSTVPATAAAPL----- 537
            +   V        AED L SDFE S    GG  +K   AK+     VPAT AAP+     
Sbjct: 182  EAEAVFDSGRSAAAEDGLFSDFEQS----GGSPEKEPPAKE-----VPATVAAPVPISEK 232

Query: 536  ---------LNSGTTIEKKNASN--QGSPSQEGQKRKRAPSEDGD---TDLQGQLINVLE 399
                      + G   ++  ASN    S SQEG+KRKR  + DGD   T LQ QLI VLE
Sbjct: 233  QYQPFPREGSSQGPASKRHPASNPEMASTSQEGRKRKRF-TVDGDEETTRLQDQLIEVLE 291

Query: 398  KSSILLTAQLEAQNMNCQLDRDQRKDQANSLVTVLSKLADALGRIADKL 252
            ++  +L+ QLEAQN N QLDR+QRKDQA+ LV VLSKLADALGRIADKL
Sbjct: 292  RNGRMLSDQLEAQNTNFQLDREQRKDQADCLVAVLSKLADALGRIADKL 340


>ref|XP_002303748.1| predicted protein [Populus trichocarpa] gi|222841180|gb|EEE78727.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  286 bits (731), Expect = 1e-74
 Identities = 168/302 (55%), Positives = 194/302 (64%), Gaps = 27/302 (8%)
 Frame = -2

Query: 1076 DDGNRQPRLPRWTRQEILVLIQGKKEAENRVRIRRPASTN----QVTEPKWATVSSYCKR 909
            DDGN+ PRLPRWTRQEILVLIQGK+ AENRVR  R +       QV EPKWA+VS+YCK+
Sbjct: 33   DDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGPGQV-EPKWASVSTYCKK 91

Query: 908  HGVNRGPVQCRKRWSNLAGDFKKIKEWEVMKSSEDRESFWVMRNDLRRERKLPGFFDREV 729
            HGVNRGPVQCRKRWSNLAGD+KKIKEWE     ++ ESFW MRNDLRRE+KLPGFFDREV
Sbjct: 92   HGVNRGPVQCRKRWSNLAGDYKKIKEWEA-SIRDETESFWFMRNDLRREKKLPGFFDREV 150

Query: 728  YDILDGGMDKVVGVLL---------------------DRSDGLAEDALSSDFEMSEEEGG 612
            YDILDGG   V G+ L                           AED L SDFE  +EEGG
Sbjct: 151  YDILDGGGGTVQGLALALAPSSAAVEAETIAEGVVFDSGRSAAAEDGLFSDFE--QEEGG 208

Query: 611  GHQDKVTVAKDCLKSTVPATAAAPLLNSGTTIEKKNASNQGSPSQEGQKRKRAPSEDGDT 432
               + V      +K   P  AA P  N             GS S E +KRKR   + G+ 
Sbjct: 209  RSPEAV------VKELQPIKAARPSTN----------PEMGSASHEDRKRKRFAIDGGEE 252

Query: 431  DL--QGQLINVLEKSSILLTAQLEAQNMNCQLDRDQRKDQANSLVTVLSKLADALGRIAD 258
             +     LI+VLE++  +LTAQLEAQN N QLDR+QRKD A+ LV VL+KLADALG+IAD
Sbjct: 253  TISSHSHLIHVLERNGKMLTAQLEAQNTNFQLDREQRKDHADGLVAVLNKLADALGKIAD 312

Query: 257  KL 252
            KL
Sbjct: 313  KL 314


>ref|NP_850213.1| gt-2-related protein [Arabidopsis thaliana]
            gi|17529158|gb|AAL38805.1| unknown protein [Arabidopsis
            thaliana] gi|20465851|gb|AAM20030.1| unknown protein
            [Arabidopsis thaliana] gi|330253757|gb|AEC08851.1|
            gt-2-related protein [Arabidopsis thaliana]
          Length = 314

 Score =  273 bits (698), Expect = 7e-71
 Identities = 165/317 (52%), Positives = 206/317 (64%), Gaps = 16/317 (5%)
 Frame = -2

Query: 1154 MALKPIDVNVNVVTI-HNDEQTSVTVNDDGNRQPRLPRWTRQEILVLIQGKKEAENRVRI 978
            MAL+ + + V+ V    N    S    DDG +  RLPRWTRQEILVLIQGK+ AENRVR 
Sbjct: 1    MALEQLGLGVSAVDGGENSSAPSNDGGDDGVKTARLPRWTRQEILVLIQGKRVAENRVRR 60

Query: 977  RRPAST---NQVTEPKWATVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWEVMKSSE 807
             R A     +   EPKWA+VSSYCKRHGVNRGPVQCRKRWSNLAGD+KKIKEWE  +  E
Sbjct: 61   GRAAGMALGSGQMEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWE-SQIKE 119

Query: 806  DRESFWVMRNDLRRERKLPGFFDREVYDILDGG-MDKVVGVLLDRSDGLAEDALSSDFEM 630
            + ES+WVMRND+RRE+KLPGFFD+EVYDI+DGG +   V VL       +++ L SD  +
Sbjct: 120  ETESYWVMRNDVRREKKLPGFFDKEVYDIVDGGVIPPAVPVLSLGLAPASDEGLLSD--L 177

Query: 629  SEEEGGGHQDKVTVAKDCLKSTVPATAAAPLLNSGTTIEKK-NASN--QGSPSQEGQKRK 459
               E     +   VAK            A + + G   EK+  A+N   GS SQE +KRK
Sbjct: 178  DRRESPEKLNSTPVAKSVTDVIDKEKQEACVADQGRVKEKQPEAANVEGGSTSQEERKRK 237

Query: 458  RA-------PSEDGDT-DLQGQLINVLEKSSILLTAQLEAQNMNCQLDRDQRKDQANSLV 303
            R          E+G+T  +Q QLI +LE++  LL AQLE QN+N +LDR+QRKD  +SLV
Sbjct: 238  RTSFGEKEEEEEEGETKKMQNQLIEILERNGQLLAAQLEVQNLNLKLDREQRKDHGDSLV 297

Query: 302  TVLSKLADALGRIADKL 252
             VL+KLADA+ +IADK+
Sbjct: 298  AVLNKLADAVAKIADKM 314


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