BLASTX nr result

ID: Coptis23_contig00015708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015708
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111
ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660...   407   e-111
ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [S...   407   e-111
ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660...   407   e-111
ref|XP_002274972.1| PREDICTED: uncharacterized protein At2g37660...   406   e-111

>ref|XP_002298302.1| predicted protein [Populus trichocarpa] gi|222845560|gb|EEE83107.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  408 bits (1049), Expect = e-111
 Identities = 199/234 (85%), Positives = 216/234 (92%)
 Frame = -3

Query: 926 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKVDTRNPDDLDPSIFEGVTHVICCT 747
           A+LL RNIKSR+LLRDP KA  LFG+QDE+ +QV K DTRNP+DLDPS+FEGVTHVICCT
Sbjct: 53  AALLNRNIKSRLLLRDPEKAVALFGKQDEEKMQVYKGDTRNPEDLDPSLFEGVTHVICCT 112

Query: 746 GTTAFPSRRWDGDNTPERVDWEGVRNLVSALPSTIKRFVLVSSVGVTKCNELPWSIMNLF 567
           GTTAFPSRRWDGDNTPER DWEGVRNLVSALPST+KR VLVSSVGVTK NELPWSIMNLF
Sbjct: 113 GTTAFPSRRWDGDNTPERTDWEGVRNLVSALPSTLKRIVLVSSVGVTKFNELPWSIMNLF 172

Query: 566 GVLKYKKMGEDFVRNSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGKRRAVLIGQGDKL 387
           GVLKYKKMGEDFV  SGLPFTIIRP RLTDGPYTSYDLNTLLKATAGKRRAV+IGQGDKL
Sbjct: 173 GVLKYKKMGEDFVLKSGLPFTIIRPARLTDGPYTSYDLNTLLKATAGKRRAVVIGQGDKL 232

Query: 386 VGEVSRLVVAEACIQALDIDFTEGQIYEINSVEGEGPGSNTKEWRELFRTAQIQ 225
           VGEVSR+VVAEACIQALDI+FTEG+IYEINSVEGEGPG + ++W+ELF+  Q Q
Sbjct: 233 VGEVSRIVVAEACIQALDIEFTEGEIYEINSVEGEGPGCDPRKWKELFKNPQSQ 286


>ref|XP_004166103.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like
            [Cucumis sativus]
          Length = 340

 Score =  407 bits (1047), Expect = e-111
 Identities = 220/336 (65%), Positives = 250/336 (74%), Gaps = 6/336 (1%)
 Frame = -3

Query: 1223 SKLSLTSISDFSFSLQKTPTT-HQRASHLPLIT--PLNPTSFYHS---KRISCSRLKSSV 1062
            +KLSL+ I  F       PTT H+    LPL T  PL  +S + +   K IS  RL S  
Sbjct: 5    TKLSLSYIPHFPHP----PTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRLPSPA 60

Query: 1061 IRNVVKEGQVQTSVXXXXXXXXXXXXXSKRXXXXXXXXXXXXXXVASLLTRNIKSRILLR 882
            IR + +E     S              SK                A+LL RN+K R+LLR
Sbjct: 61   IRAINQEVVQTPSSESTHDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLR 120

Query: 881  DPPKAQNLFGEQDEDILQVRKVDTRNPDDLDPSIFEGVTHVICCTGTTAFPSRRWDGDNT 702
            DP KA  LFGEQDE++LQV K DTRNP+DLDPSIFEGVTHVICCTGTTAFPSRRWD DNT
Sbjct: 121  DPEKAATLFGEQDENLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNT 180

Query: 701  PERVDWEGVRNLVSALPSTIKRFVLVSSVGVTKCNELPWSIMNLFGVLKYKKMGEDFVRN 522
            PERVDWEGVRNL+SA+P ++KR VLVSS+GVTK NELPWSIMNLFGVLKYKK GEDF+R+
Sbjct: 181  PERVDWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRD 240

Query: 521  SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGKRRAVLIGQGDKLVGEVSRLVVAEACIQ 342
            SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKLVGE SR+VVAEACIQ
Sbjct: 241  SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLLGQGDKLVGEASRIVVAEACIQ 300

Query: 341  ALDIDFTEGQIYEINSVEGEGPGSNTKEWRELFRTA 234
            ALDI FTEGQ YEINS+EGEGPG++ ++W ELF+ A
Sbjct: 301  ALDIGFTEGQAYEINSIEGEGPGNDPQKWSELFKGA 336


>ref|XP_002465261.1| hypothetical protein SORBIDRAFT_01g035100 [Sorghum bicolor]
           gi|241919115|gb|EER92259.1| hypothetical protein
           SORBIDRAFT_01g035100 [Sorghum bicolor]
          Length = 337

 Score =  407 bits (1046), Expect = e-111
 Identities = 195/232 (84%), Positives = 218/232 (93%)
 Frame = -3

Query: 926 ASLLTRNIKSRILLRDPPKAQNLFGEQDEDILQVRKVDTRNPDDLDPSIFEGVTHVICCT 747
           ASLL+RNIKSR+LLRDP KA +LFG+QD+ +LQV K DTRN +DLDP +FEGVTHVICCT
Sbjct: 106 ASLLSRNIKSRLLLRDPEKASSLFGKQDDSVLQVYKADTRNSNDLDPQMFEGVTHVICCT 165

Query: 746 GTTAFPSRRWDGDNTPERVDWEGVRNLVSALPSTIKRFVLVSSVGVTKCNELPWSIMNLF 567
           GTTAFPS+RWDGDNTPERVDW+G+RNLVSALP TIKR VLVSSVGVTK NE+PWSIMNLF
Sbjct: 166 GTTAFPSKRWDGDNTPERVDWDGIRNLVSALPQTIKRLVLVSSVGVTKYNEIPWSIMNLF 225

Query: 566 GVLKYKKMGEDFVRNSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGKRRAVLIGQGDKL 387
           GVLKYKKMGEDFVRNSG+PFTIIRPGRLTDGPYTSYDLNTLLKATAG+RRAV+IG+GDKL
Sbjct: 226 GVLKYKKMGEDFVRNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGERRAVVIGKGDKL 285

Query: 386 VGEVSRLVVAEACIQALDIDFTEGQIYEINSVEGEGPGSNTKEWRELFRTAQ 231
           VGEVSRLVVAEACIQALDI+ TEGQIYEINSV+GEGPG++ ++W ELFR+ Q
Sbjct: 286 VGEVSRLVVAEACIQALDIESTEGQIYEINSVKGEGPGTDPEKWEELFRSVQ 337


>ref|XP_004139052.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic-like
            [Cucumis sativus]
          Length = 340

 Score =  407 bits (1045), Expect = e-111
 Identities = 220/336 (65%), Positives = 249/336 (74%), Gaps = 6/336 (1%)
 Frame = -3

Query: 1223 SKLSLTSISDFSFSLQKTPTT-HQRASHLPLIT--PLNPTSFYHS---KRISCSRLKSSV 1062
            +KLSL+ I  F       PTT H+    LPL T  PL  +S + +   K IS  RL S  
Sbjct: 5    TKLSLSYIPHFPHP----PTTFHKTFQTLPLFTLPPLCSSSSFENQLRKTISSCRLPSPA 60

Query: 1061 IRNVVKEGQVQTSVXXXXXXXXXXXXXSKRXXXXXXXXXXXXXXVASLLTRNIKSRILLR 882
            IR + +E     S              SK                A+LL RN+K R+LLR
Sbjct: 61   IRAINQEVVQTPSSKSTRDSKTDPVASSKFVLVVGGSGGVGQLVAAALLDRNVKLRLLLR 120

Query: 881  DPPKAQNLFGEQDEDILQVRKVDTRNPDDLDPSIFEGVTHVICCTGTTAFPSRRWDGDNT 702
            DP KA  LFGEQDE +LQV K DTRNP+DLDPSIFEGVTHVICCTGTTAFPSRRWD DNT
Sbjct: 121  DPEKATTLFGEQDEKLLQVCKGDTRNPEDLDPSIFEGVTHVICCTGTTAFPSRRWDEDNT 180

Query: 701  PERVDWEGVRNLVSALPSTIKRFVLVSSVGVTKCNELPWSIMNLFGVLKYKKMGEDFVRN 522
            PERVDWEGVRNL+SA+P ++KR VLVSS+GVTK NELPWSIMNLFGVLKYKK GEDF+R+
Sbjct: 181  PERVDWEGVRNLISAIPRSVKRVVLVSSIGVTKFNELPWSIMNLFGVLKYKKQGEDFLRD 240

Query: 521  SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGKRRAVLIGQGDKLVGEVSRLVVAEACIQ 342
            SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKLVGE SR+VVAEACIQ
Sbjct: 241  SGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLLGQGDKLVGEASRIVVAEACIQ 300

Query: 341  ALDIDFTEGQIYEINSVEGEGPGSNTKEWRELFRTA 234
            ALDI FTEGQ YEINS+EGEGPG++ ++W ELF+ A
Sbjct: 301  ALDIGFTEGQAYEINSIEGEGPGNDPQKWSELFKGA 336


>ref|XP_002274972.1| PREDICTED: uncharacterized protein At2g37660, chloroplastic [Vitis
            vinifera] gi|296083822|emb|CBI24210.3| unnamed protein
            product [Vitis vinifera]
          Length = 336

 Score =  406 bits (1043), Expect = e-111
 Identities = 222/335 (66%), Positives = 251/335 (74%), Gaps = 2/335 (0%)
 Frame = -3

Query: 1229 MASKLSLTSISDFSFSLQKTPTTHQRASHLPLITPLNPTSFY--HSKRISCSRLKSSVIR 1056
            MA+ L L  I  F  S  K P   QR     L  PLNP        K I  SR ++SV  
Sbjct: 1    MATNLQLLPIHGFPLSSWKCPKYPQRVPVFSL-QPLNPPPPPPPSPKSILSSRRRASVAH 59

Query: 1055 NVVKEGQVQTSVXXXXXXXXXXXXXSKRXXXXXXXXXXXXXXVASLLTRNIKSRILLRDP 876
             V +E     +              SK               VASLL RNIKSR+LLRDP
Sbjct: 60   AVKEEVIQSPNSDPALDSKTSPPASSKLVLVVGGSGGVGQLIVASLLDRNIKSRLLLRDP 119

Query: 875  PKAQNLFGEQDEDILQVRKVDTRNPDDLDPSIFEGVTHVICCTGTTAFPSRRWDGDNTPE 696
             KA +LFG+QDE+ LQV K DTRN +DL+ SIFEGVTHVICCTGTTAFPS+RWDGDNTPE
Sbjct: 120  EKATSLFGKQDEETLQVYKGDTRNLEDLNSSIFEGVTHVICCTGTTAFPSKRWDGDNTPE 179

Query: 695  RVDWEGVRNLVSALPSTIKRFVLVSSVGVTKCNELPWSIMNLFGVLKYKKMGEDFVRNSG 516
            +VDWEGVRNLVSALPS++KR VLVSSVGVTK NELPWSIMNLFGVLKYKKMGEDF+ +SG
Sbjct: 180  KVDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFLCSSG 239

Query: 515  LPFTIIRPGRLTDGPYTSYDLNTLLKATAGKRRAVLIGQGDKLVGEVSRLVVAEACIQAL 336
            LPFTIIR GRLTDGPYTSYDLNTLLKATAG+RRAVL+GQGDKLVGEVSR+VVAEACIQAL
Sbjct: 240  LPFTIIRAGRLTDGPYTSYDLNTLLKATAGQRRAVLMGQGDKLVGEVSRIVVAEACIQAL 299

Query: 335  DIDFTEGQIYEINSVEGEGPGSNTKEWRELFRTAQ 231
            DI+FTEG+IYEINSVEG+GPGS+ ++W+ELF+TA+
Sbjct: 300  DIEFTEGKIYEINSVEGDGPGSDPQKWQELFKTAE 334


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