BLASTX nr result
ID: Coptis23_contig00015668
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015668 (439 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34465.3| unnamed protein product [Vitis vinifera] 50 2e-07 ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246... 50 2e-07 ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246... 50 2e-07 ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210... 49 3e-07 ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arab... 50 2e-06 >emb|CBI34465.3| unnamed protein product [Vitis vinifera] Length = 564 Score = 50.1 bits (118), Expect(2) = 2e-07 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355 DSQSIAS+LF SLF Y FLYFITKS TAPKL L Sbjct: 449 DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 483 Score = 30.0 bits (66), Expect(2) = 2e-07 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = +3 Query: 69 KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233 K+P SS S++S+L + + +S RV R G +V L P+D WA Sbjct: 386 KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 445 Query: 234 PTGDS 248 PT DS Sbjct: 446 PTIDS 450 >ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246730 isoform 1 [Vitis vinifera] Length = 189 Score = 50.1 bits (118), Expect(2) = 2e-07 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355 DSQSIAS+LF SLF Y FLYFITKS TAPKL L Sbjct: 74 DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 108 Score = 30.0 bits (66), Expect(2) = 2e-07 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = +3 Query: 69 KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233 K+P SS S++S+L + + +S RV R G +V L P+D WA Sbjct: 11 KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 70 Query: 234 PTGDS 248 PT DS Sbjct: 71 PTIDS 75 >ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246730 isoform 2 [Vitis vinifera] Length = 183 Score = 50.1 bits (118), Expect(2) = 2e-07 Identities = 27/36 (75%), Positives = 28/36 (77%) Frame = +2 Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355 DSQSIAS+LF SLF Y FLYFITKS TAPKL L Sbjct: 74 DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 108 Score = 30.0 bits (66), Expect(2) = 2e-07 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Frame = +3 Query: 69 KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233 K+P SS S++S+L + + +S RV R G +V L P+D WA Sbjct: 11 KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 70 Query: 234 PTGDS 248 PT DS Sbjct: 71 PTIDS 75 >ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210365 [Cucumis sativus] gi|449501796|ref|XP_004161461.1| PREDICTED: uncharacterized LOC101210365 [Cucumis sativus] Length = 190 Score = 49.3 bits (116), Expect(2) = 3e-07 Identities = 26/36 (72%), Positives = 28/36 (77%) Frame = +2 Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355 DSQSIAS++F SLF Y FLYFITKS TAPKL L Sbjct: 73 DSQSIASQIFAF-SLFPYIGFLYFITKSKTAPKLTL 107 Score = 30.0 bits (66), Expect(2) = 3e-07 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 162 KSRRVFSTRSGAVVSSLFPMDSWAPTGDS 248 ++R S R+G + ++ P+D WAP DS Sbjct: 46 RNRSFISKRNGIICGAILPVDPWAPNIDS 74 >ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arabidopsis lyrata subsp. lyrata] gi|297333735|gb|EFH64153.1| hypothetical protein ARALYDRAFT_474915 [Arabidopsis lyrata subsp. lyrata] Length = 198 Score = 49.7 bits (117), Expect(2) = 2e-06 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +2 Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355 DSQSIAS+LF V SLF Y FLYF+TKS +APKL L Sbjct: 80 DSQSIASQLFAV-SLFPYIGFLYFLTKSKSAPKLTL 114 Score = 26.6 bits (57), Expect(2) = 2e-06 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%) Frame = +3 Query: 114 SILDIKKNTLYSKSFWKSRRVFSTRSGAVVS------SLFPMDSWAPTGDS 248 S + I +N + F ++ + R VS +FP+D WAPT DS Sbjct: 31 STVSISRNKSFFLHFTDTKEKKARRDDLRVSIVCNAGGMFPVDPWAPTIDS 81