BLASTX nr result

ID: Coptis23_contig00015668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015668
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34465.3| unnamed protein product [Vitis vinifera]               50   2e-07
ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246...    50   2e-07
ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246...    50   2e-07
ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210...    49   3e-07
ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arab...    50   2e-06

>emb|CBI34465.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +2

Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355
           DSQSIAS+LF   SLF Y  FLYFITKS TAPKL L
Sbjct: 449 DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 483



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 69  KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233
           K+P      SS S++S+L   +   + +S         RV   R G +V  L  P+D WA
Sbjct: 386 KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 445

Query: 234 PTGDS 248
           PT DS
Sbjct: 446 PTIDS 450


>ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246730 isoform 1 [Vitis
           vinifera]
          Length = 189

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +2

Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355
           DSQSIAS+LF   SLF Y  FLYFITKS TAPKL L
Sbjct: 74  DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 108



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 69  KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233
           K+P      SS S++S+L   +   + +S         RV   R G +V  L  P+D WA
Sbjct: 11  KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 70

Query: 234 PTGDS 248
           PT DS
Sbjct: 71  PTIDS 75


>ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246730 isoform 2 [Vitis
           vinifera]
          Length = 183

 Score = 50.1 bits (118), Expect(2) = 2e-07
 Identities = 27/36 (75%), Positives = 28/36 (77%)
 Frame = +2

Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355
           DSQSIAS+LF   SLF Y  FLYFITKS TAPKL L
Sbjct: 74  DSQSIASQLFAF-SLFPYIGFLYFITKSKTAPKLTL 108



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 69  KYPLPVRQRSS*STTSILDIKKNTLYSKS----FWKSRRVFSTRSGAVVSSL-FPMDSWA 233
           K+P      SS S++S+L   +   + +S         RV   R G +V  L  P+D WA
Sbjct: 11  KFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCGLPLPVDPWA 70

Query: 234 PTGDS 248
           PT DS
Sbjct: 71  PTIDS 75


>ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210365 [Cucumis sativus]
           gi|449501796|ref|XP_004161461.1| PREDICTED:
           uncharacterized LOC101210365 [Cucumis sativus]
          Length = 190

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = +2

Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355
           DSQSIAS++F   SLF Y  FLYFITKS TAPKL L
Sbjct: 73  DSQSIASQIFAF-SLFPYIGFLYFITKSKTAPKLTL 107



 Score = 30.0 bits (66), Expect(2) = 3e-07
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 162 KSRRVFSTRSGAVVSSLFPMDSWAPTGDS 248
           ++R   S R+G +  ++ P+D WAP  DS
Sbjct: 46  RNRSFISKRNGIICGAILPVDPWAPNIDS 74


>ref|XP_002887894.1| hypothetical protein ARALYDRAFT_474915 [Arabidopsis lyrata subsp.
           lyrata] gi|297333735|gb|EFH64153.1| hypothetical protein
           ARALYDRAFT_474915 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +2

Query: 248 DSQSIASRLFVVASLFQYTSFLYFITKSNTAPKLAL 355
           DSQSIAS+LF V SLF Y  FLYF+TKS +APKL L
Sbjct: 80  DSQSIASQLFAV-SLFPYIGFLYFLTKSKSAPKLTL 114



 Score = 26.6 bits (57), Expect(2) = 2e-06
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = +3

Query: 114 SILDIKKNTLYSKSFWKSRRVFSTRSGAVVS------SLFPMDSWAPTGDS 248
           S + I +N  +   F  ++   + R    VS       +FP+D WAPT DS
Sbjct: 31  STVSISRNKSFFLHFTDTKEKKARRDDLRVSIVCNAGGMFPVDPWAPTIDS 81


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