BLASTX nr result

ID: Coptis23_contig00015663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015663
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/...   206   2e-51
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-51
gb|ABK96044.1| unknown [Populus trichocarpa]                          205   3e-51
ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycin...   203   1e-50
ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putat...   203   1e-50

>ref|XP_003531779.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Glycine max]
          Length = 380

 Score =  206 bits (524), Expect = 2e-51
 Identities = 103/141 (73%), Positives = 115/141 (81%)
 Frame = -1

Query: 423 SGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVNMLRII 244
           SGAL+GAMTKA+L PLETIRTRMVVGVG +NIAGSFIEVIEQQGW GLWAGN +NMLRI+
Sbjct: 87  SGALSGAMTKAILAPLETIRTRMVVGVGSKNIAGSFIEVIEQQGWQGLWAGNMINMLRIV 146

Query: 243 PTQAIELGTFECVKRAVTSAKEKCKQNGGTKLQIGHVSLDVSLSWISPXXXXXXXXXXVS 64
           PTQAIELGTFECVKRA+TS  EK + N   KLQIG ++ ++SLSWISP           S
Sbjct: 147 PTQAIELGTFECVKRAMTSLHEKWESNEYPKLQIGPINFNLSLSWISPVAIAGAAAGIAS 206

Query: 63  TLVCHPLEVLKDRLTISREAY 1
           TLVCHPLEVLKDRLT+S E Y
Sbjct: 207 TLVCHPLEVLKDRLTVSPETY 227


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/141 (73%), Positives = 116/141 (82%)
 Frame = -1

Query: 423 SGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVNMLRII 244
           SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAGN +NMLRII
Sbjct: 50  SGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGINMLRII 109

Query: 243 PTQAIELGTFECVKRAVTSAKEKCKQNGGTKLQIGHVSLDVSLSWISPXXXXXXXXXXVS 64
           PTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+G +SL  SLSWISP           S
Sbjct: 110 PTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAVGGAAAGIFS 169

Query: 63  TLVCHPLEVLKDRLTISREAY 1
           TL CHPLEVLKDRLT+SR+ Y
Sbjct: 170 TLACHPLEVLKDRLTVSRDIY 190


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/141 (73%), Positives = 116/141 (82%)
 Frame = -1

Query: 423 SGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVNMLRII 244
           SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAGN +NMLRII
Sbjct: 73  SGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAGNGINMLRII 132

Query: 243 PTQAIELGTFECVKRAVTSAKEKCKQNGGTKLQIGHVSLDVSLSWISPXXXXXXXXXXVS 64
           PTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+G +SL  SLSWISP           S
Sbjct: 133 PTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAVGGAAAGIFS 192

Query: 63  TLVCHPLEVLKDRLTISREAY 1
           TL CHPLEVLKDRLT+SR+ Y
Sbjct: 193 TLACHPLEVLKDRLTVSRDIY 213


>ref|NP_001241139.1| uncharacterized protein LOC100795558 [Glycine max]
           gi|255648051|gb|ACU24481.1| unknown [Glycine max]
          Length = 381

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/141 (71%), Positives = 114/141 (80%)
 Frame = -1

Query: 423 SGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVNMLRII 244
           SGALAGAM KA+L PLETIRTRMVVGVG +NIAGSFI+VIEQQGW GLWAGN +NMLRI+
Sbjct: 88  SGALAGAMAKAILAPLETIRTRMVVGVGSKNIAGSFIDVIEQQGWQGLWAGNMINMLRIV 147

Query: 243 PTQAIELGTFECVKRAVTSAKEKCKQNGGTKLQIGHVSLDVSLSWISPXXXXXXXXXXVS 64
           PTQAIELGTFECVKRA+TS  EK + N   KLQIG ++ ++SLSWISP           S
Sbjct: 148 PTQAIELGTFECVKRAMTSLHEKWEHNEYPKLQIGSINFNLSLSWISPVAIAGAAAGIAS 207

Query: 63  TLVCHPLEVLKDRLTISREAY 1
           T+VCHPLEVLKDRLT+S E Y
Sbjct: 208 TVVCHPLEVLKDRLTVSPETY 228


>ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
           gi|223547220|gb|EEF48715.1| Mitochondrial
           deoxynucleotide carrier, putative [Ricinus communis]
          Length = 375

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/141 (72%), Positives = 116/141 (82%)
 Frame = -1

Query: 423 SGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAGNTVNMLRII 244
           SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+E+IE+QGW GLWAGN +NMLRII
Sbjct: 83  SGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEIIEKQGWQGLWAGNAINMLRII 142

Query: 243 PTQAIELGTFECVKRAVTSAKEKCKQNGGTKLQIGHVSLDVSLSWISPXXXXXXXXXXVS 64
           PTQAIELGTFECVKR +T A+EK  + G  ++QIG VSL+ SLSW+SP          VS
Sbjct: 143 PTQAIELGTFECVKRTMTLAQEKWNETGCPRVQIGPVSLNFSLSWVSPVAVAGAAAGIVS 202

Query: 63  TLVCHPLEVLKDRLTISREAY 1
           TLVCHPLEVLKDRLTIS + Y
Sbjct: 203 TLVCHPLEVLKDRLTISPDTY 223


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