BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015640
         (1750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Br...   358   2e-96
gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]                    356   1e-95
ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG3...   356   1e-95
gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japo...   344   5e-92
gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indi...   344   5e-92

>ref|XP_003563838.1| PREDICTED: 50S ribosomal protein L1-like [Brachypodium distachyon]
          Length = 405

 Score =  358 bits (919), Expect = 2e-96
 Identities = 206/376 (54%), Positives = 246/376 (65%), Gaps = 36/376 (9%)
 Frame = +3

Query: 228  SRSHIPIIKPVSYAPKPKIINPPERTQNVE---------------PTQQSSASAWTREDF 362
            S S  P IKPVSYAPKP+   PPE T   E               P QQ     +TR++ 
Sbjct: 31   STSAPPPIKPVSYAPKPQA--PPEETSAAEAPSASPDSQFPPPRRPQQQPPPPQFTRQEM 88

Query: 363  RYVKGV-----PSMHPVKV--------AXXXXXXXXXXXXXXXXANKIQMK----RRVIT 491
            R+VK       P  +P +V        A                  +I+M+    RR I 
Sbjct: 89   RFVKDAGPAIAPVSYPSRVVPLPDDHPADEGAGEGAVEEGLRGEGERIEMEVARARRSIF 148

Query: 492  RTEPLQPVLPFPTLIKVEKKKPKTVLDLQEAIKEVKANA---ERKFDETVEAHVILGVDP 662
              +  +  +P+PTLI V K+  K  +DL +A++E+K++A   +R F ETVEAHV+LGVDP
Sbjct: 149  GVQVEEETVPYPTLIPVVKRPQKVAIDLVDALREIKSSANEKKRNFTETVEAHVMLGVDP 208

Query: 663  RRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXKGG-KLN 839
            RRGDQMVRGA TLPHGTGKTVR+AVF                           KGG KL+
Sbjct: 209  RRGDQMVRGAITLPHGTGKTVRVAVFAEGPAAEEAKAAGADVVGGDELIEEIRKGGGKLS 268

Query: 840  FDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRAAKRGRVDFKIDKTAI 1019
            FDKCI+TP+FMPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+AAK GRVDFKIDKTAI
Sbjct: 269  FDKCIATPMFMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKTAI 328

Query: 1020 VHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFPVS 1199
            VHVGLGKV+F+E++LREN+GAFVNALLLAKPVGLKKTSKYVGYVK F+L STMGP FPV+
Sbjct: 329  VHVGLGKVNFSEESLRENIGAFVNALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFPVT 388

Query: 1200 IQSLSLAADHYNKLQL 1247
            I SLS AADHYNK+Q+
Sbjct: 389  IPSLSAAADHYNKVQV 404


>gb|AFW86742.1| 50S ribosomal protein L1 [Zea mays]
          Length = 409

 Score =  356 bits (913), Expect = 1e-95
 Identities = 208/382 (54%), Positives = 245/382 (64%), Gaps = 34/382 (8%)
 Frame = +3

Query: 204  NEDQEKSQSRSHIPIIKPVSYAPKPKIINPPER-----TQNVEPTQQSSASA-------- 344
            + D + S +    P IKPVSYAPKP+   PPE      T +V P  QS            
Sbjct: 27   SSDAKSSSASPPPPPIKPVSYAPKPQQQAPPEESAAPTTPDVAPRDQSPLPRRPQQPMPP 86

Query: 345  --WTREDFRYVKGV-----PSMHPVKVAXXXXXXXXXXXXXXXXANKIQ--MKRRVITRT 497
              WTR+D RYVK       P  +P +VA                   +Q   +R  +   
Sbjct: 87   REWTRQDMRYVKDAAPAISPVSYPSRVAPLPEDRPVGGEVEEVQDGGLQGESERIQMNAA 146

Query: 498  EPLQPV--------LPFPTLIKVEKKKPKTVLDLQEAIKEVKANA---ERKFDETVEAHV 644
             P + V        LP+PT+I V K+  K  +DL +AI+ VK +A   +R F ETVEAHV
Sbjct: 147  RPTRSVFGMHEEDRLPYPTVIPVVKRPQKVAIDLIDAIRLVKTSANEKKRNFVETVEAHV 206

Query: 645  ILGVDPRRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK 824
            ILGVDPRRGDQMVRGA TLPHGTGKTVR+AVF                            
Sbjct: 207  ILGVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPGADEARAAGADVVGGDELIEEIRT 266

Query: 825  -GGKLNFDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRAAKRGRVDFK 1001
             GGKL+FDKCI+TP+FMPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+AAK GRVDFK
Sbjct: 267  GGGKLSFDKCIATPMFMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFK 326

Query: 1002 IDKTAIVHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMG 1181
            IDKTAIVHVGLGKV+FTE++LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMG
Sbjct: 327  IDKTAIVHVGLGKVNFTEESLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMG 386

Query: 1182 PAFPVSIQSLSLAADHYNKLQL 1247
            P  PV+I SLS+AADHYNK+Q+
Sbjct: 387  PGLPVTIPSLSVAADHYNKVQV 408


>ref|NP_001149141.1| LOC100282763 [Zea mays] gi|195625038|gb|ACG34349.1| 50S ribosomal
            protein L1 [Zea mays]
          Length = 409

 Score =  356 bits (913), Expect = 1e-95
 Identities = 208/382 (54%), Positives = 245/382 (64%), Gaps = 34/382 (8%)
 Frame = +3

Query: 204  NEDQEKSQSRSHIPIIKPVSYAPKPKIINPPER-----TQNVEPTQQSSASA-------- 344
            + D + S +    P IKPVSYAPKP+   PPE      T +V P  QS            
Sbjct: 27   SSDAKSSSASPPPPPIKPVSYAPKPQQQAPPEESAAPTTPDVAPRDQSPLPRRPQQPMPP 86

Query: 345  --WTREDFRYVKGV-----PSMHPVKVAXXXXXXXXXXXXXXXXANKIQ--MKRRVITRT 497
              WTR+D RYVK       P  +P +VA                   +Q   +R  +   
Sbjct: 87   REWTRQDMRYVKDAAPAISPVSYPSRVAPLPEDRPVGGEVEEVQDGGLQGESERIQMNAV 146

Query: 498  EPLQPV--------LPFPTLIKVEKKKPKTVLDLQEAIKEVKANA---ERKFDETVEAHV 644
             P + V        LP+PT+I V K+  K  +DL +AI+ VK +A   +R F ETVEAHV
Sbjct: 147  RPTRSVFGMHEEDRLPYPTVIPVVKRPQKVAIDLIDAIRLVKTSANEKKRNFVETVEAHV 206

Query: 645  ILGVDPRRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK 824
            ILGVDPRRGDQMVRGA TLPHGTGKTVR+AVF                            
Sbjct: 207  ILGVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPGADEARAAGADVVGGDELIEEIRT 266

Query: 825  -GGKLNFDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRAAKRGRVDFK 1001
             GGKL+FDKCI+TP+FMPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+AAK GRVDFK
Sbjct: 267  GGGKLSFDKCIATPMFMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFK 326

Query: 1002 IDKTAIVHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMG 1181
            IDKTAIVHVGLGKV+FTE++LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMG
Sbjct: 327  IDKTAIVHVGLGKVNFTEESLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMG 386

Query: 1182 PAFPVSIQSLSLAADHYNKLQL 1247
            P  PV+I SLS+AADHYNK+Q+
Sbjct: 387  PGLPVTIPSLSVAADHYNKVQV 408


>gb|EEE65850.1| hypothetical protein OsJ_21625 [Oryza sativa Japonica Group]
          Length = 417

 Score =  344 bits (882), Expect = 5e-92
 Identities = 199/379 (52%), Positives = 239/379 (63%), Gaps = 43/379 (11%)
 Frame = +3

Query: 243  PIIKPVSYAPKPKIIN----------------------PPERTQNVEPTQQSSASAWTRE 356
            P IKPVSYAPKP+                         PP R+Q     QQ     WTRE
Sbjct: 42   PPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPPPRRSQGPPQRQQ-----WTRE 96

Query: 357  DFRYVKGV-----PSMHPVKVAXXXXXXXXXXXXXXXXAN--------KIQMK----RRV 485
            + R+VK       P  +P +VA                A+        +I+M     RR 
Sbjct: 97   EMRFVKDAGPSITPVSYPARVAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRS 156

Query: 486  ITRTEPLQPVLPFPTLIKVEKKKPKTVLDLQEAIKEVKANA---ERKFDETVEAHVILGV 656
                +  +   P+PTLI VEK+  K  +DL +AI+E+K +A   +R F ETVEAHV+LGV
Sbjct: 157  FFGMQAEEEQAPYPTLIPVEKRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGV 216

Query: 657  DPRRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GGK 833
            DPRRGDQMVRGA TLPHGTGKTVR+AVF                             GGK
Sbjct: 217  DPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGK 276

Query: 834  LNFDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRAAKRGRVDFKIDKT 1013
            L+FDKCI+TP++MPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+AAK GRVDFKIDKT
Sbjct: 277  LSFDKCIATPMYMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKT 336

Query: 1014 AIVHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFP 1193
            AIVHVGLGK++F+++ LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMGP FP
Sbjct: 337  AIVHVGLGKINFSDENLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFP 396

Query: 1194 VSIQSLSLAADHYNKLQLK 1250
            V+I SLS AADHYN  +++
Sbjct: 397  VTIPSLSAAADHYNNSKVQ 415


>gb|EEC80778.1| hypothetical protein OsI_23301 [Oryza sativa Indica Group]
          Length = 417

 Score =  344 bits (882), Expect = 5e-92
 Identities = 199/379 (52%), Positives = 239/379 (63%), Gaps = 43/379 (11%)
 Frame = +3

Query: 243  PIIKPVSYAPKPKIIN----------------------PPERTQNVEPTQQSSASAWTRE 356
            P IKPVSYAPKP+                         PP R+Q     QQ     WTRE
Sbjct: 42   PPIKPVSYAPKPQPAPEEAPAAAEEAAPSDDPGSRPPPPPRRSQGPPQRQQ-----WTRE 96

Query: 357  DFRYVKGV-----PSMHPVKVAXXXXXXXXXXXXXXXXAN--------KIQMK----RRV 485
            + R+VK       P  +P +VA                A+        +I+M     RR 
Sbjct: 97   EMRFVKDAGPSITPVSYPARVAPLPEDRPAEEAPPEGPADEGLRGEGERIEMDATRARRS 156

Query: 486  ITRTEPLQPVLPFPTLIKVEKKKPKTVLDLQEAIKEVKANA---ERKFDETVEAHVILGV 656
                +  +   P+PTLI VEK+  K  +DL +AI+E+K +A   +R F ETVEAHV+LGV
Sbjct: 157  FFGMQAEEEQAPYPTLIPVEKRPQKVAIDLVDAIREIKTSANEKKRNFTETVEAHVMLGV 216

Query: 657  DPRRGDQMVRGAATLPHGTGKTVRIAVFXXXXXXXXXXXXXXXXXXXXXXXXXXXK-GGK 833
            DPRRGDQMVRGA TLPHGTGKTVR+AVF                             GGK
Sbjct: 217  DPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEARAAGADVVGGDELIEEIRTGGGK 276

Query: 834  LNFDKCISTPIFMPRLSKIARILGPRGLMPNNKLGSLTNDVGGAVRAAKRGRVDFKIDKT 1013
            L+FDKCI+TP++MPRLSK+ARILGPRGLMPN KLGS+TNDV GAV+AAK GRVDFKIDKT
Sbjct: 277  LSFDKCIATPMYMPRLSKVARILGPRGLMPNPKLGSVTNDVSGAVKAAKSGRVDFKIDKT 336

Query: 1014 AIVHVGLGKVSFTEDTLRENVGAFVNALLLAKPVGLKKTSKYVGYVKSFSLCSTMGPAFP 1193
            AIVHVGLGK++F+++ LREN+GAFV+ALLLAKPVGLKKTSKYVGYVK F+L STMGP FP
Sbjct: 337  AIVHVGLGKINFSDENLRENIGAFVHALLLAKPVGLKKTSKYVGYVKKFTLSSTMGPGFP 396

Query: 1194 VSIQSLSLAADHYNKLQLK 1250
            V+I SLS AADHYN  +++
Sbjct: 397  VTIPSLSAAADHYNNSKVQ 415