BLASTX nr result

ID: Coptis23_contig00015623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015623
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = -3

Query: 322 SCNWWRIEGFPCAHALCSILVDGLNVYTYCDNFFYSQTFRDSYSRAIVPVENSKLPA 152
           SC  W++ GFPC+HA+  +   G +VY YC  F+ ++ +R +YS +I PV     PA
Sbjct: 466 SCREWQLNGFPCSHAVAVLQHIGRDVYDYCSKFYTTEAYRLTYSESIKPVPTVDKPA 522


>ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|222871420|gb|EEF08551.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = -3

Query: 322 SCNWWRIEGFPCAHALCSILVDGLNVYTYCDNFFYSQTFRDSYSRAIVPVENSKLPAK 149
           SC  W++ GFPC HAL  I   G   Y YC  +F ++++R +YS ++ PV N  +P +
Sbjct: 470 SCKEWQLTGFPCCHALAVIGCIGRCPYDYCSRYFTTESYRLTYSESVHPVTNVDMPVE 527


>ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|222857301|gb|EEE94848.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = -3

Query: 322 SCNWWRIEGFPCAHALCSILVDGLNVYTYCDNFFYSQTFRDSYSRAIVPVENSKLP 155
           SC  W++ G PC HAL  I   G + Y YC  +F ++++R +YS ++ PV N  +P
Sbjct: 470 SCKDWQLSGLPCCHALAVIGCIGRSPYDYCSRYFTTESYRLTYSESVHPVPNVDMP 525


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