BLASTX nr result

ID: Coptis23_contig00015616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015616
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi...   318   2e-84
ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera...   318   3e-84
gb|AAC72386.1| chaperone GrpE type 1 [Nicotiana tabacum]              317   4e-84
ref|NP_567757.1| molecular chaperone GrpE [Arabidopsis thaliana]...   316   8e-84
emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]   316   1e-83

>ref|XP_002531197.1| Protein grpE, putative [Ricinus communis] gi|223529199|gb|EEF31174.1|
            Protein grpE, putative [Ricinus communis]
          Length = 308

 Score =  318 bits (815), Expect = 2e-84
 Identities = 171/318 (53%), Positives = 229/318 (72%), Gaps = 1/318 (0%)
 Frame = -2

Query: 1280 MLASKVLSRISRTIGLKHCRRNITTSLFRPREECFTTSNHFHSLREPN-NKWIPFQVTSL 1104
            +++  VLSR SR++G    RR++       +++    SN   SL   N N+++  QV+  
Sbjct: 2    LISRVVLSRASRSVG----RRSLLLLSPSQKQQLPIFSNQIESLVHVNSNQFVAGQVSLF 57

Query: 1103 HPSVLSINDSQRFWYSSSPQPTDKEASQSGDGQETVASSSTSANSEGADSKGNSETVGKK 924
            H S  S +  QRF ++SS  P   E  +    +    S++    +   D+K ++ET    
Sbjct: 58   HHSAFSSSPFQRFGFTSSASPEANE-KEGSTAENNADSTNVEPETSNGDTKPSNET---- 112

Query: 923  XXXXXXXXXXXDLSYDDLVKLVADKEELLNLKHEEIKRMEDKYLRSYAELKNIMDRTKRD 744
                       DLS DDLVKLVA+KEELL LKH+EI++M+DK LR+YAE++N+M+RTKR+
Sbjct: 113  --REPDSDTEGDLSMDDLVKLVAEKEELLKLKHKEIEKMQDKVLRTYAEMENVMERTKRE 170

Query: 743  AENSKKFAIQNFAKSLLDVSDNLGRASSVVKESFSKIDTSTDTAGAVPLLKTLLEGVEMT 564
            AENS+KFAIQNFAK LLDV+DNLGRASSVVK+S+SKIDTSTDTAGAVPLLKTLLEGVEMT
Sbjct: 171  AENSRKFAIQNFAKGLLDVADNLGRASSVVKDSYSKIDTSTDTAGAVPLLKTLLEGVEMT 230

Query: 563  EKQLAMVFKKFGLEKYEPLNEQFDPNKHHALFQIPDASKPPGTIGAVLKAGYTLHDRIIR 384
            EKQLA VF+K G+EKY+P +E FDP++H+A+F++PD+SKPPGT+  VLKAGY LHDR+IR
Sbjct: 231  EKQLAEVFRKSGVEKYDPRDEPFDPHRHNAVFEVPDSSKPPGTVAVVLKAGYLLHDRVIR 290

Query: 383  PAEVGVTEALNNETEESS 330
            PAEVGVT+ + N+T  ++
Sbjct: 291  PAEVGVTKEVENDTASNN 308


>ref|XP_002277588.2| PREDICTED: protein grpE-like [Vitis vinifera]
            gi|297737494|emb|CBI26695.3| unnamed protein product
            [Vitis vinifera]
          Length = 298

 Score =  318 bits (814), Expect = 3e-84
 Identities = 180/317 (56%), Positives = 227/317 (71%), Gaps = 3/317 (0%)
 Frame = -2

Query: 1280 MLASKVLSRISRTIGLKHCRRNITTSLFRPREECFTTSNHFHSLREPNNKWIPFQVTSLH 1101
            M AS+VL R +RT+      +  T+SL  P+    T       + E  +K +  QV+ LH
Sbjct: 1    MFASRVLFRSTRTL----LAQGRTSSLLAPQSHLNT-----FLIGESTDKVVATQVSLLH 51

Query: 1100 PSVLSINDSQRFWYSSS--PQPTDKEASQSGDGQETVASSSTSANSEGADSKGNSETVGK 927
              V + +  QRF  SSS  PQ  +KE +QSG+ Q TV +    A++E A +    E+  +
Sbjct: 52   HLVHNASIFQRFGISSSASPQTNEKETTQSGNEQGTVENDGAPADAEPAKTNQAEESDSE 111

Query: 926  KXXXXXXXXXXXDLSYDDLVKLVADKEELLNLKHEEIKRMEDKYLRSYAELKNIMDRTKR 747
                         LS DDL+KLV +KEELL +K++EI++M+DK LRSYAE++N+M+R +R
Sbjct: 112  AD-----------LSMDDLMKLVLEKEELLKMKNKEIEKMQDKVLRSYAEMENVMERARR 160

Query: 746  DAENSKKFAIQNFAKSLLDVSDNLGRASSVVKESFSKIDTSTDTAGAVPLLKTLLEGVEM 567
            +AENSKKFAIQNFAKSLLDV+DNLGRAS VVKESFSKID S DTAGAVPLLKTLLEGVEM
Sbjct: 161  EAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTAGAVPLLKTLLEGVEM 220

Query: 566  TEKQLAMVFKKFGLEKYEPLNEQFDPNKHHALFQIPDASKPPGTIGAVLKAGYTLHDRII 387
            TEKQL  VF+KFG+EK++P NEQFDP++H+A FQIPD SKP GT+  VLKAGY LHDR+I
Sbjct: 221  TEKQLGEVFRKFGMEKFDPTNEQFDPHRHNAAFQIPDPSKPSGTVAVVLKAGYMLHDRVI 280

Query: 386  RPAEVGVTEAL-NNETE 339
            RPAEVGVT+A+ NNETE
Sbjct: 281  RPAEVGVTQAVDNNETE 297


>gb|AAC72386.1| chaperone GrpE type 1 [Nicotiana tabacum]
          Length = 299

 Score =  317 bits (813), Expect = 4e-84
 Identities = 178/322 (55%), Positives = 219/322 (68%), Gaps = 5/322 (1%)
 Frame = -2

Query: 1280 MLASKVLSRISRTIGLKHCRRNITTSLFRPREECFTTSNHFHSLREPNNKWIPFQVTSLH 1101
            M  S++ SR SR + L  CR        + +      S+ FHS+R+   K       SL 
Sbjct: 1    MSVSRISSRFSRNV-LTQCRLYYRQQKQQQQHHLPILSSQFHSVRDIKEK------VSLL 53

Query: 1100 PSVLSINDSQRFWY----SSSPQPTDKEASQS-GDGQETVASSSTSANSEGADSKGNSET 936
            P      DS   W+    S+SPQP +KE SQS G+G  T   +S SA+S   D K  S+ 
Sbjct: 54   P------DSALQWFGISSSASPQPNEKETSQSQGEGGSTTEKASASADSHIQDEKDESDI 107

Query: 935  VGKKXXXXXXXXXXXDLSYDDLVKLVADKEELLNLKHEEIKRMEDKYLRSYAELKNIMDR 756
              +             LS DDLVKLV +KEELL +K +E ++++DK+LRSYAE++N+M+R
Sbjct: 108  DAED------------LSRDDLVKLVVEKEELLKMKDDEFRKLQDKFLRSYAEMENVMER 155

Query: 755  TKRDAENSKKFAIQNFAKSLLDVSDNLGRASSVVKESFSKIDTSTDTAGAVPLLKTLLEG 576
            TKR+AENSKKFAIQNF K+LLDV DNLGRASSVVKESFSKID S DT GA+PLLKTLLEG
Sbjct: 156  TKREAENSKKFAIQNFVKALLDVPDNLGRASSVVKESFSKIDASKDTVGAMPLLKTLLEG 215

Query: 575  VEMTEKQLAMVFKKFGLEKYEPLNEQFDPNKHHALFQIPDASKPPGTIGAVLKAGYTLHD 396
            VEMT+KQLA VFKKFG+EKY+P NEQFDPNKH+A+FQ+PD  K PG I   LK GYTLHD
Sbjct: 216  VEMTDKQLAEVFKKFGVEKYDPTNEQFDPNKHNAVFQVPDPEKAPGVIAVCLKPGYTLHD 275

Query: 395  RIIRPAEVGVTEALNNETEESS 330
            RIIRPAEVGVT A+  E ++S+
Sbjct: 276  RIIRPAEVGVTVAVETEADQST 297


>ref|NP_567757.1| molecular chaperone GrpE [Arabidopsis thaliana]
            gi|21593024|gb|AAM64973.1| grpE like protein [Arabidopsis
            thaliana] gi|26451456|dbj|BAC42827.1| putative grpE
            protein [Arabidopsis thaliana] gi|29824143|gb|AAP04032.1|
            putative grpE protein [Arabidopsis thaliana]
            gi|332659851|gb|AEE85251.1| molecular chaperone GrpE
            [Arabidopsis thaliana]
          Length = 327

 Score =  316 bits (810), Expect = 8e-84
 Identities = 175/330 (53%), Positives = 231/330 (70%), Gaps = 15/330 (4%)
 Frame = -2

Query: 1280 MLASKVLSRISRTIGLKHCRRNITTSLFRPREECFTTSNHFHSLREP-NNKWIPFQVTSL 1104
            ML  ++LSR++R  G+   R +++      R +    S+ FHSL    ++K +P Q++ +
Sbjct: 1    MLVLRILSRVTRNAGI---RSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKLVPAQMSMM 57

Query: 1103 HPSVLSINDSQRFWYSSSPQP------TDKEASQSGDGQETVASSSTSANSEGADSKGNS 942
                L     QRF +SSS  P      T  EAS++ + + T  ++    +SE  DS  +S
Sbjct: 58   DSFAL-----QRFNFSSSTSPESDEKKTHTEASKTSEEKPTAEANQPGLDSESKDSVTDS 112

Query: 941  ETVGKKXXXXXXXXXXXD--------LSYDDLVKLVADKEELLNLKHEEIKRMEDKYLRS 786
                +K                    LS DDLVKLVA+KEELL+ K EEIK+++DK LR+
Sbjct: 113  AKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRT 172

Query: 785  YAELKNIMDRTKRDAENSKKFAIQNFAKSLLDVSDNLGRASSVVKESFSKIDTSTDTAGA 606
            YAE++N+MDRT+RDAEN+KK+A+QNFAKSLLDV+DNLGRASSVVKESFSK+DTS D+AGA
Sbjct: 173  YAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGA 232

Query: 605  VPLLKTLLEGVEMTEKQLAMVFKKFGLEKYEPLNEQFDPNKHHALFQIPDASKPPGTIGA 426
             PLLKTLLEGVEMTEKQLA VFKKFG+EKY+P+NE FDPN+H+A+FQ+PDASKP GT+  
Sbjct: 233  APLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAH 292

Query: 425  VLKAGYTLHDRIIRPAEVGVTEALNNETEE 336
            VLK+GYTL+DR+IRPAEVGVT+   N+ E+
Sbjct: 293  VLKSGYTLYDRVIRPAEVGVTQGGENQEEK 322


>emb|CAN76715.1| hypothetical protein VITISV_018795 [Vitis vinifera]
          Length = 413

 Score =  316 bits (809), Expect = 1e-83
 Identities = 184/327 (56%), Positives = 229/327 (70%), Gaps = 18/327 (5%)
 Frame = -2

Query: 1265 VLSRISRTIGLKHCRRNITTSLFRPREECFTTSNHFHSLREPNNKWIPFQVTSLHPSVLS 1086
            VL R +RT+      +  T+SL  P+    T       + E  +K +  QV+ LH  V +
Sbjct: 95   VLFRSTRTL----LAQGRTSSLLAPQSHLNT-----FLIGESTDKVVATQVSLLHHLVHN 145

Query: 1085 INDSQRFWYSSS--PQPTDKEASQSGDGQETVASSSTSANSE----------GADSKGNS 942
             +  QRF  SSS  PQ  +KE +QSG+ Q TV +    A++E          G +SK  S
Sbjct: 146  ASIFQRFGISSSASPQTNEKETTQSGNEQGTVENDGAPADAEPAKTNQAEESGYNSKPQS 205

Query: 941  ETV-----GKKXXXXXXXXXXXDLSYDDLVKLVADKEELLNLKHEEIKRMEDKYLRSYAE 777
            E+V     G K           DLS DDL+KLV +KEELL +K++EI++M+DK LRSYAE
Sbjct: 206  ESVKRRRRGTKRTAFSDSDSEADLSMDDLMKLVVEKEELLKMKNKEIEKMQDKVLRSYAE 265

Query: 776  LKNIMDRTKRDAENSKKFAIQNFAKSLLDVSDNLGRASSVVKESFSKIDTSTDTAGAVPL 597
            ++N+M+R +R+AENSKKFAIQNFAKSLLDV+DNLGRAS VVKESFSKID S DTAGAVPL
Sbjct: 266  MENVMERARREAENSKKFAIQNFAKSLLDVADNLGRASLVVKESFSKIDESKDTAGAVPL 325

Query: 596  LKTLLEGVEMTEKQLAMVFKKFGLEKYEPLNEQFDPNKHHALFQIPDASKPPGTIGAVLK 417
            LKTLLEGVEMTEKQL  VF+KFG+EK++P NEQFDP++H+A FQIPD SKP GT+  VLK
Sbjct: 326  LKTLLEGVEMTEKQLGEVFRKFGMEKFDPTNEQFDPHRHNAAFQIPDPSKPSGTVAVVLK 385

Query: 416  AGYTLHDRIIRPAEVGVTEAL-NNETE 339
            AGY LHDR+IRPAEVGVT+A+ NNETE
Sbjct: 386  AGYMLHDRVIRPAEVGVTQAVDNNETE 412


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