BLASTX nr result
ID: Coptis23_contig00015595
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015595
(708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis ... 119 1e-46
ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|2... 121 1e-46
ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|2... 121 3e-46
ref|XP_002440325.1| hypothetical protein SORBIDRAFT_09g029740 [S... 115 1e-45
ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [G... 120 2e-45
>ref|XP_002279361.1| PREDICTED: UPF0202 protein At1g10490 [Vitis vinifera]
gi|296082521|emb|CBI21526.3| unnamed protein product
[Vitis vinifera]
Length = 1032
Score = 119 bits (298), Expect(2) = 1e-46
Identities = 56/72 (77%), Positives = 65/72 (90%)
Frame = +2
Query: 2 TFGMCILQDFEAMTPNLLARTIETVEGGGLIVLMLPTVSSLSRIYKMSMDVHERFQTESH 181
TFGMC+LQDFEA+TPNLLARTIETVEGGGLIVL+L ++SSL+ +Y M MDVHERF+TESH
Sbjct: 116 TFGMCVLQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERFRTESH 175
Query: 182 YEVTGRFNERFI 217
E GRFNERF+
Sbjct: 176 SEAAGRFNERFL 187
Score = 94.0 bits (232), Expect(2) = 1e-46
Identities = 45/78 (57%), Positives = 60/78 (76%), Gaps = 6/78 (7%)
Frame = +1
Query: 325 FNERFILSLASCKSCVVMDDELNILPISLNLN------FEEDFKGLSKMQRDLKNVKEAA 486
FNERF+LSLASCK+CV+MDDELNILPIS ++ +ED +GLS+ +RDLKN+KE
Sbjct: 182 FNERFLLSLASCKACVIMDDELNILPISSHIRSITAVPVKEDSEGLSEAERDLKNLKEQL 241
Query: 487 SDGLPVCPFLGKCCTLNR 540
++ PV P + KCCTL++
Sbjct: 242 NEDFPVGPLIKKCCTLDQ 259
>ref|XP_002310611.1| predicted protein [Populus trichocarpa] gi|222853514|gb|EEE91061.1|
predicted protein [Populus trichocarpa]
Length = 1033
Score = 121 bits (304), Expect(2) = 1e-46
Identities = 58/72 (80%), Positives = 66/72 (91%)
Frame = +2
Query: 2 TFGMCILQDFEAMTPNLLARTIETVEGGGLIVLMLPTVSSLSRIYKMSMDVHERFQTESH 181
TFGMCILQDFEA+TPNLLARTIETVEGGGLIVL+L ++SSL+ +Y M MDVHERF+TESH
Sbjct: 115 TFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERFRTESH 174
Query: 182 YEVTGRFNERFI 217
E TGRFNERF+
Sbjct: 175 SEATGRFNERFL 186
Score = 91.3 bits (225), Expect(2) = 1e-46
Identities = 45/78 (57%), Positives = 59/78 (75%), Gaps = 6/78 (7%)
Frame = +1
Query: 325 FNERFILSLASCKSCVVMDDELNILPISLNLN------FEEDFKGLSKMQRDLKNVKEAA 486
FNERF+LSLASCK+CVVMDDELNILPIS ++ +ED +GLS+ +R+LKN+KE
Sbjct: 181 FNERFLLSLASCKACVVMDDELNILPISSHIRSITPNPVKEDSEGLSEAERNLKNLKEQL 240
Query: 487 SDGLPVCPFLGKCCTLNR 540
+ PV P + KCCTL++
Sbjct: 241 HEDFPVGPLVKKCCTLDQ 258
>ref|XP_002307135.1| predicted protein [Populus trichocarpa] gi|222856584|gb|EEE94131.1|
predicted protein [Populus trichocarpa]
Length = 962
Score = 121 bits (304), Expect(2) = 3e-46
Identities = 57/72 (79%), Positives = 66/72 (91%)
Frame = +2
Query: 2 TFGMCILQDFEAMTPNLLARTIETVEGGGLIVLMLPTVSSLSRIYKMSMDVHERFQTESH 181
TFGMCILQDFEA+TPNLLARTIETVEGGGLIVL+L ++SSL+ +Y M MDVHERF+TESH
Sbjct: 121 TFGMCILQDFEALTPNLLARTIETVEGGGLIVLLLRSLSSLTSLYTMVMDVHERFRTESH 180
Query: 182 YEVTGRFNERFI 217
+ TGRFNERF+
Sbjct: 181 FRATGRFNERFL 192
Score = 90.1 bits (222), Expect(2) = 3e-46
Identities = 45/78 (57%), Positives = 57/78 (73%), Gaps = 6/78 (7%)
Frame = +1
Query: 325 FNERFILSLASCKSCVVMDDELNILPISLNLN------FEEDFKGLSKMQRDLKNVKEAA 486
FNERF+LSLASCK+CVVMDDELNILPIS ++ +ED +GLS+ +R LKN+KE
Sbjct: 187 FNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSEGLSEAERGLKNLKEQL 246
Query: 487 SDGLPVCPFLGKCCTLNR 540
PV P + KCCTL++
Sbjct: 247 HQDFPVGPLIKKCCTLDQ 264
>ref|XP_002440325.1| hypothetical protein SORBIDRAFT_09g029740 [Sorghum bicolor]
gi|241945610|gb|EES18755.1| hypothetical protein
SORBIDRAFT_09g029740 [Sorghum bicolor]
Length = 1024
Score = 115 bits (289), Expect(2) = 1e-45
Identities = 54/72 (75%), Positives = 64/72 (88%)
Frame = +2
Query: 2 TFGMCILQDFEAMTPNLLARTIETVEGGGLIVLMLPTVSSLSRIYKMSMDVHERFQTESH 181
TFGMCILQDFEA+TPNLLARTIETVEGGGLI+L+L ++SSL+ +Y M MDVHERF+TESH
Sbjct: 116 TFGMCILQDFEALTPNLLARTIETVEGGGLIILLLRSLSSLTSLYTMVMDVHERFRTESH 175
Query: 182 YEVTGRFNERFI 217
+ RFNERF+
Sbjct: 176 TQAAARFNERFL 187
Score = 94.0 bits (232), Expect(2) = 1e-45
Identities = 44/78 (56%), Positives = 60/78 (76%), Gaps = 6/78 (7%)
Frame = +1
Query: 325 FNERFILSLASCKSCVVMDDELNILPISLNLNF------EEDFKGLSKMQRDLKNVKEAA 486
FNERF+LS+ASCK+CVVMDDELNILPIS ++ F ED +GLSK +R+LK++K+
Sbjct: 182 FNERFLLSIASCKACVVMDDELNILPISSHMKFIQPVTNNEDSEGLSKRERELKDLKDQF 241
Query: 487 SDGLPVCPFLGKCCTLNR 540
+ PV P +GKCCT+++
Sbjct: 242 REDFPVGPLIGKCCTMDQ 259
>ref|XP_003525087.1| PREDICTED: UPF0202 protein At1g10490-like [Glycine max]
Length = 1029
Score = 120 bits (300), Expect(2) = 2e-45
Identities = 55/72 (76%), Positives = 66/72 (91%)
Frame = +2
Query: 2 TFGMCILQDFEAMTPNLLARTIETVEGGGLIVLMLPTVSSLSRIYKMSMDVHERFQTESH 181
TFGMC+LQDFEA+TPNLLARTIETVEGGGL+VL+L ++SSL+R+Y M MDVH+RF+TESH
Sbjct: 116 TFGMCVLQDFEALTPNLLARTIETVEGGGLVVLLLRSLSSLTRLYTMVMDVHDRFRTESH 175
Query: 182 YEVTGRFNERFI 217
E GRFNERF+
Sbjct: 176 SEAAGRFNERFL 187
Score = 89.0 bits (219), Expect(2) = 2e-45
Identities = 44/78 (56%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
Frame = +1
Query: 325 FNERFILSLASCKSCVVMDDELNILPISLNLN------FEEDFKGLSKMQRDLKNVKEAA 486
FNERF+LSLASCK+CVVMDDELNILPIS ++ +ED LS+ ++DLKN+KE
Sbjct: 182 FNERFLLSLASCKACVVMDDELNILPISSHIRSITPVPVKEDSDELSEAEQDLKNLKEQL 241
Query: 487 SDGLPVCPFLGKCCTLNR 540
++ PV P + KCCTL++
Sbjct: 242 NEDFPVGPLIKKCCTLDQ 259