BLASTX nr result

ID: Coptis23_contig00015585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015585
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea m...   181   2e-43
tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, parti...   181   2e-43
ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-l...   181   2e-43
dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgar...   181   2e-43
ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [S...   181   2e-43

>tpg|DAA53991.1| TPA: hypothetical protein ZEAMMB73_426325 [Zea mays]
          Length = 172

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 35  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 214
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 215 IRGNTIKYLRVPDEVIDKVQEETNK 289
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>tpg|DAA53989.1| TPA: hypothetical protein ZEAMMB73_426325, partial [Zea mays]
          Length = 112

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 35  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 214
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 215 IRGNTIKYLRVPDEVIDKVQEETNK 289
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>ref|XP_003566534.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Brachypodium distachyon] gi|326528247|dbj|BAJ93305.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 142

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 35  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 214
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 215 IRGNTIKYLRVPDEVIDKVQEETNK 289
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>dbj|BAJ92310.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521472|dbj|BAK00312.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 143

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 35  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 214
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 215 IRGNTIKYLRVPDEVIDKVQEETNK 289
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


>ref|XP_002457589.1| hypothetical protein SORBIDRAFT_03g009890 [Sorghum bicolor]
           gi|241929564|gb|EES02709.1| hypothetical protein
           SORBIDRAFT_03g009890 [Sorghum bicolor]
          Length = 145

 Score =  181 bits (458), Expect = 2e-43
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 35  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 214
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 60

Query: 215 IRGNTIKYLRVPDEVIDKVQEETNK 289
           IRGNTIKYLRVPDEVIDKVQEET+K
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETSK 85


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