BLASTX nr result

ID: Coptis23_contig00015573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015573
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533983.1| WD-repeat protein, putative [Ricinus communi...   282   3e-74
ref|XP_002325106.1| predicted protein [Populus trichocarpa] gi|2...   279   3e-73
ref|XP_003633169.1| PREDICTED: autophagy-related protein 18-like...   274   1e-71
emb|CBI36593.3| unnamed protein product [Vitis vinifera]              274   1e-71
ref|NP_974641.2| autophagy-related protein 18b [Arabidopsis thal...   261   1e-67

>ref|XP_002533983.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526034|gb|EEF28403.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 349

 Score =  282 bits (722), Expect = 3e-74
 Identities = 139/164 (84%), Positives = 152/164 (92%)
 Frame = -2

Query: 494 GLCAFSPNMDGCFLALPASTTKGSVLVYNVMELHSHCEIDAHRSPLAAMVLSSNGVYIAT 315
           GLCAFSP++DGCFLALPASTTKGSVLVYNVMEL SHCEIDAHR+PLAA+ LSSNG+YIAT
Sbjct: 137 GLCAFSPSLDGCFLALPASTTKGSVLVYNVMELQSHCEIDAHRAPLAAVALSSNGMYIAT 196

Query: 314 ASEQGTIIRVHVVSEATKSYSFRRGTYPSTIYSLSFGPSLQLPDILVATSSSGSVHVFSL 135
           ASEQGTIIRVH+V EATKSYSFRRGTYPSTI+SLSFGPS QLPDILVA+SSSGSVHVFSL
Sbjct: 197 ASEQGTIIRVHLVQEATKSYSFRRGTYPSTIFSLSFGPSKQLPDILVASSSSGSVHVFSL 256

Query: 134 ASLINQRSKRSSSLLGSMFPDTVNDVFEPSHHLVLHNAVPAGVK 3
              INQRS+RSSS LGS+ PD+VND  +P+HH VLHNAVPAGVK
Sbjct: 257 GFTINQRSRRSSSFLGSILPDSVNDALDPAHHHVLHNAVPAGVK 300


>ref|XP_002325106.1| predicted protein [Populus trichocarpa] gi|222866540|gb|EEF03671.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  279 bits (714), Expect = 3e-73
 Identities = 136/164 (82%), Positives = 151/164 (92%)
 Frame = -2

Query: 494 GLCAFSPNMDGCFLALPASTTKGSVLVYNVMELHSHCEIDAHRSPLAAMVLSSNGVYIAT 315
           GLCAFSP++DGCFLALP+STTKGSVLVYNVMELHSHCEIDAHRSPLAA+V+S NG+YIAT
Sbjct: 87  GLCAFSPSLDGCFLALPSSTTKGSVLVYNVMELHSHCEIDAHRSPLAAIVMSFNGMYIAT 146

Query: 314 ASEQGTIIRVHVVSEATKSYSFRRGTYPSTIYSLSFGPSLQLPDILVATSSSGSVHVFSL 135
           ASEQGTIIRVH+VSEATKSYSFRRGTYPSTI+SLSFGPS QLP+ILVA SSSGS+HVFSL
Sbjct: 147 ASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFGPSTQLPEILVALSSSGSIHVFSL 206

Query: 134 ASLINQRSKRSSSLLGSMFPDTVNDVFEPSHHLVLHNAVPAGVK 3
              INQR +RSSS LGS+ PD+VND F+P+HH VL  AVPAGVK
Sbjct: 207 GLAINQRGRRSSSFLGSLLPDSVNDAFDPAHHRVLQKAVPAGVK 250


>ref|XP_003633169.1| PREDICTED: autophagy-related protein 18-like [Vitis vinifera]
          Length = 368

 Score =  274 bits (700), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 494 GLCAFSPNMDGCFLALPASTTKGSVLVYNVMELHSHCEIDAHRSPLAAMVLSSNGVYIAT 315
           GLCAFSP++DGCFLALPASTT+GSVLVYNVMELHSHCEIDAHRSPLAA+V S NG+YIAT
Sbjct: 137 GLCAFSPSLDGCFLALPASTTRGSVLVYNVMELHSHCEIDAHRSPLAAIVFSPNGMYIAT 196

Query: 314 ASEQGTIIRVHVVSEATKSYSFRRGTYPSTIYSLSFGPSLQLPDILVATSSSGSVHVFSL 135
           ASEQGTIIRVH++SEATKSYSFRRG YPSTI+SLSFGPS Q PD+LVATSSSGSVH FSL
Sbjct: 197 ASEQGTIIRVHLISEATKSYSFRRGAYPSTIFSLSFGPSTQFPDVLVATSSSGSVHAFSL 256

Query: 134 ASLINQRSKRSSSLLGSMFPDTVNDVFEPSHHLVLHNAVPAGVK 3
              +NQRS+RSSS  GS+ PD+VNDV +P+HH VLHN VPAGVK
Sbjct: 257 GLGMNQRSRRSSSFFGSIIPDSVNDVLDPAHH-VLHNVVPAGVK 299


>emb|CBI36593.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  274 bits (700), Expect = 1e-71
 Identities = 134/164 (81%), Positives = 149/164 (90%)
 Frame = -2

Query: 494 GLCAFSPNMDGCFLALPASTTKGSVLVYNVMELHSHCEIDAHRSPLAAMVLSSNGVYIAT 315
           GLCAFSP++DGCFLALPASTT+GSVLVYNVMELHSHCEIDAHRSPLAA+V S NG+YIAT
Sbjct: 137 GLCAFSPSLDGCFLALPASTTRGSVLVYNVMELHSHCEIDAHRSPLAAIVFSPNGMYIAT 196

Query: 314 ASEQGTIIRVHVVSEATKSYSFRRGTYPSTIYSLSFGPSLQLPDILVATSSSGSVHVFSL 135
           ASEQGTIIRVH++SEATKSYSFRRG YPSTI+SLSFGPS Q PD+LVATSSSGSVH FSL
Sbjct: 197 ASEQGTIIRVHLISEATKSYSFRRGAYPSTIFSLSFGPSTQFPDVLVATSSSGSVHAFSL 256

Query: 134 ASLINQRSKRSSSLLGSMFPDTVNDVFEPSHHLVLHNAVPAGVK 3
              +NQRS+RSSS  GS+ PD+VNDV +P+HH VLHN VPAGVK
Sbjct: 257 GLGMNQRSRRSSSFFGSIIPDSVNDVLDPAHH-VLHNVVPAGVK 299


>ref|NP_974641.2| autophagy-related protein 18b [Arabidopsis thaliana]
           gi|332660375|gb|AEE85775.1| autophagy-related protein
           18b [Arabidopsis thaliana]
          Length = 248

 Score =  261 bits (666), Expect = 1e-67
 Identities = 126/164 (76%), Positives = 148/164 (90%)
 Frame = -2

Query: 494 GLCAFSPNMDGCFLALPASTTKGSVLVYNVMELHSHCEIDAHRSPLAAMVLSSNGVYIAT 315
           GL AFSP+++GC+LA+PASTTKGSVLVYNVM+L SH EIDAHRSPLAA+ LSSNG+YIAT
Sbjct: 84  GLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHSEIDAHRSPLAAIALSSNGMYIAT 143

Query: 314 ASEQGTIIRVHVVSEATKSYSFRRGTYPSTIYSLSFGPSLQLPDILVATSSSGSVHVFSL 135
            SEQGT+IRVH+VSEATKSYSFRRGTYPSTIYSLSFGPS QLPDIL+ATSSSGS+H FSL
Sbjct: 144 GSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFGPSTQLPDILIATSSSGSIHAFSL 203

Query: 134 ASLINQRSKRSSSLLGSMFPDTVNDVFEPSHHLVLHNAVPAGVK 3
           +  INQRSKRS+S LGS+ PD+V+D  +P+HH VL NAV +G++
Sbjct: 204 SLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQNAVSSGIR 247


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