BLASTX nr result

ID: Coptis23_contig00015564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015564
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319829.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_003634722.1| PREDICTED: uncharacterized protein LOC100852...    71   8e-11
ref|XP_002319296.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
gb|AAO60015.1| hypothetical protein [Oryza sativa Japonica Group]      67   1e-09

>ref|XP_002319829.1| predicted protein [Populus trichocarpa] gi|222858205|gb|EEE95752.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
 Frame = -2

Query: 213 LYRDLRVLKEQIDASCIVE----DCEDRDIPATVWAPFQIMQLWAWERFLSLRPNPNCIS 46
           +YRDLR+LK++I A   +E    D +D+ +  T+W+PF I+Q+WAWERF  L+P PN   
Sbjct: 188 IYRDLRLLKKKILALSNLESFEDDNDDQKLELTIWSPFHIVQVWAWERFPKLQPKPNVTD 247

Query: 45  SGEPRAARWKNLNA 4
              PR ARW N+N+
Sbjct: 248 FEVPRLARWHNVNS 261


>ref|XP_002319830.1| predicted protein [Populus trichocarpa] gi|222858206|gb|EEE95753.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = -2

Query: 213 LYRDLRVLKEQIDA-SCIV---EDCEDRDIPATVWAPFQIMQLWAWERFLSLRPNPNCIS 46
           +YRDLR+LK++I A S +V   +D +D+ +  T+W+PF I+Q+WAWERF  L+P PN   
Sbjct: 256 IYRDLRLLKKKILALSNLVSFEDDNDDQKLELTIWSPFHIVQVWAWERFPKLQPKPNVTD 315

Query: 45  SGEPRAARWKNLNA 4
              PR ARW N+N+
Sbjct: 316 LEVPRLARWHNVNS 329


>ref|XP_003634722.1| PREDICTED: uncharacterized protein LOC100852441 [Vitis vinifera]
           gi|297737405|emb|CBI26606.3| unnamed protein product
           [Vitis vinifera]
          Length = 630

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -2

Query: 213 LYRDLRVLKEQIDASCIVE-DCEDRDIPA-TVWAPFQIMQLWAWERFLSLRPNPNCISSG 40
           +YRDL +LKE I AS  +  D  D DI + T+ AP +++Q+WAWERF  LRP PN ++ G
Sbjct: 254 IYRDLSLLKETIIASTELRMDGSDGDILSLTLQAPLRLVQVWAWERFPGLRPEPNAMNHG 313

Query: 39  EPRAARWKNL 10
           EPR ARW  L
Sbjct: 314 EPRIARWHGL 323


>ref|XP_002319296.1| predicted protein [Populus trichocarpa] gi|222857672|gb|EEE95219.1|
           predicted protein [Populus trichocarpa]
          Length = 661

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/68 (41%), Positives = 44/68 (64%)
 Frame = -2

Query: 213 LYRDLRVLKEQIDASCIVEDCEDRDIPATVWAPFQIMQLWAWERFLSLRPNPNCISSGEP 34
           +YRDL +LKE I  +  +E  ED  +  T+W+PF ++Q+W WERF   +P P  + +G+P
Sbjct: 257 IYRDLSLLKETIVFTTKLETFEDGVLALTIWSPFLLVQIWGWERFPMFQPKPLFLKNGDP 316

Query: 33  RAARWKNL 10
           R A W ++
Sbjct: 317 RCALWDSV 324


>gb|AAO60015.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1748

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = -2

Query: 213 LYRDLRVLKEQIDASCIVEDCEDRDIPATVWAPFQIMQLWAWERFLSLRP-NPNCISSGE 37
           +YRDLR LK  + +S      E    P +V+APF ++QLWAWERF ++RP   N I +GE
Sbjct: 252 IYRDLRELKAFLSSSSAAATGELLS-PLSVYAPFYLLQLWAWERFPAIRPAKANPIKAGE 310

Query: 36  PRAARWKNLNAK 1
           PRAARW +++ K
Sbjct: 311 PRAARWNDVSNK 322


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