BLASTX nr result

ID: Coptis23_contig00015557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015557
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237874.1| uncharacterized protein LOC100305865 precurs...   145   1e-32
ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinife...   143   4e-32
gb|AFK46705.1| unknown [Lotus japonicus]                              142   1e-31
ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-31
ref|XP_002509536.1| Blue copper protein precursor, putative [Ric...   136   6e-30

>ref|NP_001237874.1| uncharacterized protein LOC100305865 precursor [Glycine max]
           gi|255626823|gb|ACU13756.1| unknown [Glycine max]
          Length = 162

 Score =  145 bits (365), Expect = 1e-32
 Identities = 72/117 (61%), Positives = 82/117 (70%), Gaps = 4/117 (3%)
 Frame = +3

Query: 87  ILLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXX 254
           I L + + L   E +A QHVV     WD STD NSW SG+TFKVGDQLVFKY   LH   
Sbjct: 7   IFLALVVTLITKETMAEQHVVGGSQGWDESTDFNSWVSGQTFKVGDQLVFKY-SSLHSVV 65

Query: 255 XXXXXXXYKNCDIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKTVA 425
                  YKNCD+GNA +S + GNDVVKL KPGTRYFACGT+GHCDQGMK+KI TV+
Sbjct: 66  ELGSESEYKNCDLGNAVNSMSSGNDVVKLNKPGTRYFACGTMGHCDQGMKVKITTVS 122


>ref|XP_002262831.1| PREDICTED: blue copper protein [Vitis vinifera]
           gi|296090231|emb|CBI40050.3| unnamed protein product
           [Vitis vinifera]
          Length = 176

 Score =  143 bits (361), Expect = 4e-32
 Identities = 69/121 (57%), Positives = 88/121 (72%), Gaps = 5/121 (4%)
 Frame = +3

Query: 78  VYKIL-LVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGL 242
           +Y++L  ++ + L   + LATQHVV     WD S+D + WASG+TF+VGDQLVFKY  GL
Sbjct: 4   LYRVLSALVVVGLLTNKALATQHVVGGSQGWDESSDYSKWASGQTFEVGDQLVFKYTPGL 63

Query: 243 HXXXXXXXXXXYKNCDIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKTV 422
           H          YKNCD+G+A +S N GN+VVKL+K GTRYFACGT+GHCDQGMKLK+ TV
Sbjct: 64  HSVVELPNESAYKNCDVGSALNSMNSGNNVVKLSKAGTRYFACGTIGHCDQGMKLKVSTV 123

Query: 423 A 425
           +
Sbjct: 124 S 124


>gb|AFK46705.1| unknown [Lotus japonicus]
          Length = 162

 Score =  142 bits (357), Expect = 1e-31
 Identities = 69/115 (60%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
 Frame = +3

Query: 87  ILLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXX 254
           I L + ++L   E LA QHVV     WD STD NSW SG+TF VGDQLVFKY  GLH   
Sbjct: 7   IFLALVVSLITKEALAEQHVVGGSQGWDQSTDFNSWVSGKTFNVGDQLVFKYSSGLHSVV 66

Query: 255 XXXXXXXYKNCDIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKT 419
                  YKNCDIG+A ++ + GND VKL+KPGTRYFACGT GHC QGMK+KI T
Sbjct: 67  ELGSESDYKNCDIGSAVNTMSSGNDAVKLSKPGTRYFACGTSGHCSQGMKVKITT 121


>ref|XP_002298616.1| predicted protein [Populus trichocarpa] gi|222845874|gb|EEE83421.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score =  139 bits (349), Expect = 9e-31
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
 Frame = +3

Query: 90  LLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXXX 257
           L+++++AL   E +A QHVV     W+ STD +SWASG+ FKVGDQLVFKY  GLH    
Sbjct: 1   LVLVFVALITKEAMAAQHVVGGSQGWEESTDFSSWASGQKFKVGDQLVFKYTSGLHSVVE 60

Query: 258 XXXXXXYKNCDIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKI 413
                 YK+C +G A +S N GNDVVKL KPGTRYFACGTLGHC QGMK+KI
Sbjct: 61  LGGESAYKSCGLGTALNSMNTGNDVVKLNKPGTRYFACGTLGHCGQGMKVKI 112


>ref|XP_002509536.1| Blue copper protein precursor, putative [Ricinus communis]
           gi|223549435|gb|EEF50923.1| Blue copper protein
           precursor, putative [Ricinus communis]
          Length = 166

 Score =  136 bits (342), Expect = 6e-30
 Identities = 66/114 (57%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
 Frame = +3

Query: 90  LLVIYLALGATEVLATQHVVT----WDVSTDLNSWASGRTFKVGDQLVFKYMKGLHXXXX 257
           L++ ++AL   E +A QHVV     WD S D +SW S + FKVGDQL FKY  GLH    
Sbjct: 7   LMLFFVALFVKEGMAAQHVVGGSQGWDESADFSSWTSSKKFKVGDQLAFKYTSGLHSVVE 66

Query: 258 XXXXXXYKNCDIGNAADSKNGGNDVVKLTKPGTRYFACGTLGHCDQGMKLKIKT 419
                 YKNCD+G+  DS + GNDVVKL+K GTRYFACGTLGHCDQGMK+KI T
Sbjct: 67  LASESAYKNCDLGSPLDSLSTGNDVVKLSKEGTRYFACGTLGHCDQGMKVKITT 120


Top