BLASTX nr result
ID: Coptis23_contig00015550
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015550 (742 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera] 53 2e-08 emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera] 50 1e-07 ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249... 50 2e-07 emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 47 2e-07 emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera] 50 2e-07 >emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera] Length = 1138 Score = 53.1 bits (126), Expect(2) = 2e-08 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = -2 Query: 648 HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469 H ++ A+WE+ F LI W+ P ++EAL + K + I +P W +WKE Sbjct: 715 HCIVTRALWEIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIWKSIPLCIFWTVWKE 774 Query: 468 RNA--RIFDIQEQDL 430 RN+ R+F +Q +L Sbjct: 775 RNSQQRVFAVQVFEL 789 Score = 31.6 bits (70), Expect(2) = 2e-08 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 740 TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642 T+D ++L N C LC EENV H+L+ C Sbjct: 684 TLDRLQLRGVQLPNCCYLCGCEEENVHHILLHC 716 >emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera] Length = 1232 Score = 50.4 bits (119), Expect(2) = 1e-07 Identities = 22/66 (33%), Positives = 33/66 (50%) Frame = -2 Query: 648 HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469 H ++ A+WE+ F LI W+ P ++EAL + K + I +P W +WKE Sbjct: 985 HCIVTRALWEIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIWKSIPLCIFWTVWKE 1044 Query: 468 RNARIF 451 RN F Sbjct: 1045 RNRLAF 1050 Score = 31.6 bits (70), Expect(2) = 1e-07 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 740 TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642 T+D ++L N C LC EENV H+L+ C Sbjct: 954 TLDRLQLRGVQLPNCCYLCGCEEENVHHILLHC 986 >ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera] Length = 2143 Score = 49.7 bits (117), Expect(2) = 2e-07 Identities = 21/77 (27%), Positives = 38/77 (49%) Frame = -2 Query: 642 SLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKERN 463 S + +WE+ F+L +W+ P ++R+ L + K R + P W +WKERN Sbjct: 1854 SKARVLWELLFALFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERN 1913 Query: 462 ARIFDIQEQDLVKVAEE 412 FD +E + + ++ Sbjct: 1914 RIAFDNEELSMNSIIQK 1930 Score = 31.2 bits (69), Expect(2) = 2e-07 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 707 LRNVCSLCKQVEENVDHLLITC 642 L N C LC + EE++DH+LI C Sbjct: 1832 LANRCFLCCEEEESIDHILIQC 1853 >emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] Length = 1848 Score = 46.6 bits (109), Expect(2) = 2e-07 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = -2 Query: 648 HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469 H S + +WE+ FSL +W+ P ++RE L + K R + P W +WK Sbjct: 1740 HCSKTRVLWELLFSLFGVSWVMPCSVRETLLSWQTSSVGKKHRKVWRAAPLHIFWTVWKA 1799 Query: 468 RNARIF 451 RN F Sbjct: 1800 RNRLAF 1805 Score = 34.3 bits (77), Expect(2) = 2e-07 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 740 TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642 T+D+ L N C +C + EE +DHLL+ C Sbjct: 1709 TLDLVQRRGWSLANRCYMCMEKEETIDHLLLHC 1741 >emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera] Length = 939 Score = 49.7 bits (117), Expect(2) = 2e-07 Identities = 22/71 (30%), Positives = 35/71 (49%) Frame = -2 Query: 642 SLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKERN 463 S + +WE+ F+L +W+ P ++R+ L + K R + P W +WKERN Sbjct: 833 SKARVLWELLFALFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERN 892 Query: 462 ARIFDIQEQDL 430 FD +E L Sbjct: 893 RIAFDNEELSL 903 Score = 31.2 bits (69), Expect(2) = 2e-07 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -3 Query: 707 LRNVCSLCKQVEENVDHLLITC 642 L N C LC + EE++DH+LI C Sbjct: 811 LANRCFLCCEEEESIDHILIQC 832