BLASTX nr result

ID: Coptis23_contig00015550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015550
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]    53   2e-08
emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]    50   1e-07
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...    50   2e-07
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    47   2e-07
emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    50   2e-07

>emb|CAN70608.1| hypothetical protein VITISV_040198 [Vitis vinifera]
          Length = 1138

 Score = 53.1 bits (126), Expect(2) = 2e-08
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = -2

Query: 648 HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469
           H  ++ A+WE+ F LI   W+ P  ++EAL       +  K + I   +P    W +WKE
Sbjct: 715 HCIVTRALWEIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIWKSIPLCIFWTVWKE 774

Query: 468 RNA--RIFDIQEQDL 430
           RN+  R+F +Q  +L
Sbjct: 775 RNSQQRVFAVQVFEL 789



 Score = 31.6 bits (70), Expect(2) = 2e-08
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 740 TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642
           T+D      ++L N C LC   EENV H+L+ C
Sbjct: 684 TLDRLQLRGVQLPNCCYLCGCEEENVHHILLHC 716


>emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]
          Length = 1232

 Score = 50.4 bits (119), Expect(2) = 1e-07
 Identities = 22/66 (33%), Positives = 33/66 (50%)
 Frame = -2

Query: 648  HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469
            H  ++ A+WE+ F LI   W+ P  ++EAL       +  K + I   +P    W +WKE
Sbjct: 985  HCIVTRALWEIIFGLIDVKWVHPETVKEALISWRGSFVGKKRKRIWKSIPLCIFWTVWKE 1044

Query: 468  RNARIF 451
            RN   F
Sbjct: 1045 RNRLAF 1050



 Score = 31.6 bits (70), Expect(2) = 1e-07
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 740  TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642
            T+D      ++L N C LC   EENV H+L+ C
Sbjct: 954  TLDRLQLRGVQLPNCCYLCGCEEENVHHILLHC 986


>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score = 49.7 bits (117), Expect(2) = 2e-07
 Identities = 21/77 (27%), Positives = 38/77 (49%)
 Frame = -2

Query: 642  SLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKERN 463
            S +  +WE+ F+L   +W+ P ++R+ L       +  K R +    P    W +WKERN
Sbjct: 1854 SKARVLWELLFALFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERN 1913

Query: 462  ARIFDIQEQDLVKVAEE 412
               FD +E  +  + ++
Sbjct: 1914 RIAFDNEELSMNSIIQK 1930



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 707  LRNVCSLCKQVEENVDHLLITC 642
            L N C LC + EE++DH+LI C
Sbjct: 1832 LANRCFLCCEEEESIDHILIQC 1853


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 46.6 bits (109), Expect(2) = 2e-07
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -2

Query: 648  HLSLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKE 469
            H S +  +WE+ FSL   +W+ P ++RE L       +  K R +    P    W +WK 
Sbjct: 1740 HCSKTRVLWELLFSLFGVSWVMPCSVRETLLSWQTSSVGKKHRKVWRAAPLHIFWTVWKA 1799

Query: 468  RNARIF 451
            RN   F
Sbjct: 1800 RNRLAF 1805



 Score = 34.3 bits (77), Expect(2) = 2e-07
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 740  TIDITNTSRMELRNVCSLCKQVEENVDHLLITC 642
            T+D+       L N C +C + EE +DHLL+ C
Sbjct: 1709 TLDLVQRRGWSLANRCYMCMEKEETIDHLLLHC 1741


>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 49.7 bits (117), Expect(2) = 2e-07
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = -2

Query: 642  SLSHAIWEVFFSLISKAWIRPVNIREALCIKLALPLSNKARWIADHLPRASIWILWKERN 463
            S +  +WE+ F+L   +W+ P ++R+ L       +  K R +    P    W +WKERN
Sbjct: 833  SKARVLWELLFALFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERN 892

Query: 462  ARIFDIQEQDL 430
               FD +E  L
Sbjct: 893  RIAFDNEELSL 903



 Score = 31.2 bits (69), Expect(2) = 2e-07
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 707 LRNVCSLCKQVEENVDHLLITC 642
           L N C LC + EE++DH+LI C
Sbjct: 811 LANRCFLCCEEEESIDHILIQC 832


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