BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015548
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...   268   5e-70
emb|CBI16239.3| unnamed protein product [Vitis vinifera]              259   4e-67
ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog ...   252   3e-65
ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ...   252   3e-65
gb|AAX40988.1| RAD51B [Arabidopsis thaliana]                          245   5e-63

>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score =  268 bits (686), Expect = 5e-70
 Identities = 135/210 (64%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
 Frame = +1

Query: 1   KSFPEIFHLDGMAEEMAGRILVLRPASLSEFTESLQQIQLSVLQHQVKLLIVDSVASLVS 180
           KSFPEIFH++GMA+EMAGRILVLRP SLSEFTESLQ I++S+LQ+ VKLL++DS+A+LV+
Sbjct: 159 KSFPEIFHVEGMAKEMAGRILVLRPTSLSEFTESLQHIKISLLQNHVKLLVIDSMAALVT 218

Query: 181 GEYEKDAPKQNSLGWHISFLKSLAEFSRIPIVVTNQVRSQS-SGDAVYSFQVQNRHENVK 357
           GEY++   +Q+SLGWHISF+KS+AEFSRIPIVVTNQVRSQS  G + YSFQV++R E V 
Sbjct: 219 GEYDQGPTRQHSLGWHISFVKSVAEFSRIPIVVTNQVRSQSHDGTSQYSFQVESRGETVD 278

Query: 358 DTGGLELHLVAALGIHWAHAVTIRLVLEASSGQRYIKVAKXXXXXXXXXXXXVTSSGISL 537
           D    + HLVAALGIHWAHAVTIRLVLEA +GQR++KVAK            +T SGISL
Sbjct: 279 DHTRFDSHLVAALGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISL 338

Query: 538 LSDDGIEVEGAEINAIHCQGYSDVVDLNRE 627
           L+D+GIE++G +I+ IH QG+ D+++ + E
Sbjct: 339 LNDEGIEMKGPQISTIHYQGHEDIINFDSE 368


>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  259 bits (661), Expect = 4e-67
 Identities = 131/210 (62%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
 Frame = +1

Query: 1   KSFPEIFHLDGMAEEMAGRILVLRPASLSEFTESLQQIQLSVLQHQVKLLIVDSVASLVS 180
           KSFPEIFH++GMA+E    ILVLRP SLSEFTESLQ I++S+LQ+ VKLL++DS+A+LV+
Sbjct: 159 KSFPEIFHVEGMAKEACPLILVLRPTSLSEFTESLQHIKISLLQNHVKLLVIDSMAALVT 218

Query: 181 GEYEKDAPKQNSLGWHISFLKSLAEFSRIPIVVTNQVRSQS-SGDAVYSFQVQNRHENVK 357
           GEY++   +Q+SLGWHISF+KS+AEFSRIPIVVTNQVRSQS  G + YSFQV++R E V 
Sbjct: 219 GEYDQGPTRQHSLGWHISFVKSVAEFSRIPIVVTNQVRSQSHDGTSQYSFQVESRGETVD 278

Query: 358 DTGGLELHLVAALGIHWAHAVTIRLVLEASSGQRYIKVAKXXXXXXXXXXXXVTSSGISL 537
           D    + HLVAALGIHWAHAVTIRLVLEA +GQR++KVAK            +T SGISL
Sbjct: 279 DHTRFDSHLVAALGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISL 338

Query: 538 LSDDGIEVEGAEINAIHCQGYSDVVDLNRE 627
           L+D+GIE++G +I+ IH QG+ D+++ + E
Sbjct: 339 LNDEGIEMKGPQISTIHYQGHEDIINFDSE 368


>ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
           sativus]
          Length = 379

 Score =  252 bits (644), Expect = 3e-65
 Identities = 126/205 (61%), Positives = 168/205 (81%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1   KSFPEIFHLDGMAEEMAGRILVLRPASLSEFTESLQQIQLSVLQHQVKLLIVDSVASLVS 180
           +SFP++F+   MA+EMAGRILVLRPASLSEFTESL +I++S+L+ +VKL+I+DS+A+L++
Sbjct: 167 RSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALIT 226

Query: 181 GEYEKDAPKQNSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSGD-AVYSFQVQNRHENVK 357
           GEYE  APKQ+SLGWHISF+KS+AEF+RIP+VVTNQVRS++  + + YSFQ  +R E  +
Sbjct: 227 GEYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQE 286

Query: 358 DTGGLELHLVAALGIHWAHAVTIRLVLEASSGQRYIKVAKXXXXXXXXXXXXVTSSGISL 537
            + G   H+VAALG+HWAH+VTIRLVLEA SGQR+IK+AK            +T+SGISL
Sbjct: 287 YSSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISL 346

Query: 538 LSDDGIEVEGAEINAIHCQGYSDVV 612
           LS++G E+ GAEIN IHCQG+SD++
Sbjct: 347 LSNNGEELSGAEINEIHCQGHSDII 371


>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
           sativus]
          Length = 371

 Score =  252 bits (644), Expect = 3e-65
 Identities = 126/205 (61%), Positives = 168/205 (81%), Gaps = 1/205 (0%)
 Frame = +1

Query: 1   KSFPEIFHLDGMAEEMAGRILVLRPASLSEFTESLQQIQLSVLQHQVKLLIVDSVASLVS 180
           +SFP++F+   MA+EMAGRILVLRPASLSEFTESL +I++S+L+ +VKL+I+DS+A+L++
Sbjct: 159 RSFPDVFNKKDMAQEMAGRILVLRPASLSEFTESLHKIKVSLLEQEVKLVIIDSMAALIT 218

Query: 181 GEYEKDAPKQNSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSGD-AVYSFQVQNRHENVK 357
           GEYE  APKQ+SLGWHISF+KS+AEF+RIP+VVTNQVRS++  + + YSFQ  +R E  +
Sbjct: 219 GEYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQE 278

Query: 358 DTGGLELHLVAALGIHWAHAVTIRLVLEASSGQRYIKVAKXXXXXXXXXXXXVTSSGISL 537
            + G   H+VAALG+HWAH+VTIRLVLEA SGQR+IK+AK            +T+SGISL
Sbjct: 279 YSSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISL 338

Query: 538 LSDDGIEVEGAEINAIHCQGYSDVV 612
           LS++G E+ GAEIN IHCQG+SD++
Sbjct: 339 LSNNGEELSGAEINEIHCQGHSDII 363


>gb|AAX40988.1| RAD51B [Arabidopsis thaliana]
          Length = 338

 Score =  245 bits (625), Expect = 5e-63
 Identities = 127/208 (61%), Positives = 163/208 (78%), Gaps = 1/208 (0%)
 Frame = +1

Query: 1   KSFPEIFHLDGMAEEMAGRILVLRPASLSEFTESLQQIQLSVLQHQVKLLIVDSVASLVS 180
           +SFPE+FHL GMA+EMAGRILVLRP SL+ FTES+Q+++ S+LQ+QVKLL++DS+ +L+S
Sbjct: 127 ESFPEVFHLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQVKLLVIDSMTALLS 186

Query: 181 GEYEKDAPKQNSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSGD-AVYSFQVQNRHENVK 357
           GE +  A +Q  LGWHISFLKSLAEFSRIPIVVTNQVRSQ+  + + YSFQ + + E   
Sbjct: 187 GENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKD 246

Query: 358 DTGGLELHLVAALGIHWAHAVTIRLVLEASSGQRYIKVAKXXXXXXXXXXXXVTSSGISL 537
           +T   + HLVAALGI+WAHAVTIRLVLEA SGQR IKVAK            +TS+GISL
Sbjct: 247 NTKTYDSHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGISL 306

Query: 538 LSDDGIEVEGAEINAIHCQGYSDVVDLN 621
           LSD+G E++G  IN IH +G+SD+++ +
Sbjct: 307 LSDNGTELKGPGINTIHARGHSDMINFH 334