BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015540
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate...   107   6e-30
ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate...   105   5e-29
ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase s...   100   1e-28
gb|ABD77587.1| geranyl diphosphate synthase [Vitis vinifera]          100   1e-28
gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]          100   3e-28

>ref|XP_003525839.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
           mitochondrial-like [Glycine max]
          Length = 480

 Score =  107 bits (267), Expect(2) = 6e-30
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +1

Query: 1   APILFAMEEFPQLRTVVDRGFENPADVDIALDYLGKSNGIQRTRQLATEHAKIAAEAIDS 180
           APILFAMEEFPQLRT+VD GFENPA+VD+AL+YLGKS GIQRTR+LA EHA +AA AIDS
Sbjct: 393 APILFAMEEFPQLRTIVDEGFENPANVDLALEYLGKSRGIQRTRELAVEHANLAAAAIDS 452

Query: 181 LP 186
           LP
Sbjct: 453 LP 454



 Score = 48.5 bits (114), Expect(2) = 6e-30
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +2

Query: 290 ESDDEDVLRSRRALVDLTHRVITRTK 367
           ESDDEDV +SR+AL+DLTHRVITRTK
Sbjct: 455 ESDDEDVRKSRKALIDLTHRVITRTK 480


>ref|XP_003550028.1| PREDICTED: probable hexaprenyl pyrophosphate synthase,
           mitochondrial-like [Glycine max]
          Length = 419

 Score =  105 bits (262), Expect(2) = 5e-29
 Identities = 50/62 (80%), Positives = 56/62 (90%)
 Frame = +1

Query: 1   APILFAMEEFPQLRTVVDRGFENPADVDIALDYLGKSNGIQRTRQLATEHAKIAAEAIDS 180
           APILFAMEEFPQLR +VD GFENPA+VD+AL+YLGKS GIQRTR+LA EHA +AA AIDS
Sbjct: 332 APILFAMEEFPQLRAIVDEGFENPANVDLALEYLGKSRGIQRTRELAVEHANLAAAAIDS 391

Query: 181 LP 186
           LP
Sbjct: 392 LP 393



 Score = 47.4 bits (111), Expect(2) = 5e-29
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = +2

Query: 290 ESDDEDVLRSRRALVDLTHRVITRTK 367
           E+DDEDV +SR+AL+DLTHRVITRTK
Sbjct: 394 ENDDEDVRKSRKALIDLTHRVITRTK 419


>ref|XP_002268229.2| PREDICTED: decaprenyl-diphosphate synthase subunit 1 [Vitis
           vinifera] gi|296090181|emb|CBI40000.3| unnamed protein
           product [Vitis vinifera]
          Length = 422

 Score =  100 bits (250), Expect(2) = 1e-28
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = +1

Query: 1   APILFAMEEFPQLRTVVDRGFENPADVDIALDYLGKSNGIQRTRQLATEHAKIAAEAIDS 180
           APILFA+EEFPQL  VV RG +NPAD+D+ALDYLGKS GIQRTR+LA +HA +AAEAIDS
Sbjct: 335 APILFAIEEFPQLDAVVKRGLDNPADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDS 394

Query: 181 LP 186
           LP
Sbjct: 395 LP 396



 Score = 50.4 bits (119), Expect(2) = 1e-28
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +2

Query: 290 ESDDEDVLRSRRALVDLTHRVITRTK 367
           ES DEDVLRSRRAL+DLTHRVITRTK
Sbjct: 397 ESGDEDVLRSRRALIDLTHRVITRTK 422


>gb|ABD77587.1| geranyl diphosphate synthase [Vitis vinifera]
          Length = 112

 Score =  100 bits (250), Expect(2) = 1e-28
 Identities = 48/62 (77%), Positives = 55/62 (88%)
 Frame = +1

Query: 1   APILFAMEEFPQLRTVVDRGFENPADVDIALDYLGKSNGIQRTRQLATEHAKIAAEAIDS 180
           APILFA+EEFPQL  VV RG +NPAD+D+ALDYLGKS GIQRTR+LA +HA +AAEAIDS
Sbjct: 25  APILFAIEEFPQLDAVVKRGLDNPADIDLALDYLGKSRGIQRTRELAMKHANLAAEAIDS 84

Query: 181 LP 186
           LP
Sbjct: 85  LP 86



 Score = 50.4 bits (119), Expect(2) = 1e-28
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +2

Query: 290 ESDDEDVLRSRRALVDLTHRVITRTK 367
           ES DEDVLRSRRAL+DLTHRVITRTK
Sbjct: 87  ESGDEDVLRSRRALIDLTHRVITRTK 112


>gb|AAR08151.1| geranyl diphosphate synthase [Vitis vinifera]
          Length = 321

 Score = 99.8 bits (247), Expect(2) = 3e-28
 Identities = 47/62 (75%), Positives = 55/62 (88%)
 Frame = +1

Query: 1   APILFAMEEFPQLRTVVDRGFENPADVDIALDYLGKSNGIQRTRQLATEHAKIAAEAIDS 180
           APILFA+EEFPQL  VV RG +NPAD+D+ALDYLG+S GIQRTR+LA +HA +AAEAIDS
Sbjct: 234 APILFAIEEFPQLDAVVKRGLDNPADIDLALDYLGRSRGIQRTRELAMKHANLAAEAIDS 293

Query: 181 LP 186
           LP
Sbjct: 294 LP 295



 Score = 50.4 bits (119), Expect(2) = 3e-28
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +2

Query: 290 ESDDEDVLRSRRALVDLTHRVITRTK 367
           ES DEDVLRSRRAL+DLTHRVITRTK
Sbjct: 296 ESGDEDVLRSRRALIDLTHRVITRTK 321