BLASTX nr result

ID: Coptis23_contig00015534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015534
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kD...   104   6e-21
emb|CBI25992.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kD...   103   2e-20
ref|XP_002528776.1| signal recognition particle 19 kD protein, p...   102   3e-20
ref|XP_002519304.1| signal recognition particle 19 kD protein, p...   102   4e-20

>ref|XP_004147903.1| PREDICTED: signal recognition particle 19 kDa protein-like isoform
           1 [Cucumis sativus] gi|449460341|ref|XP_004147904.1|
           PREDICTED: signal recognition particle 19 kDa
           protein-like isoform 2 [Cucumis sativus]
          Length = 135

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/61 (81%), Positives = 56/61 (91%)
 Frame = +1

Query: 10  APEKDKAYPRDFMERGRVRVLLKKEDGTLYNPAVATRKQLMLQVAELLPRHAGRTKKQEP 189
           A E DKAYPRDFM+RGRVRVLLKKEDGTL NPA+ +RKQLML++AEL+PRH GRTKKQEP
Sbjct: 57  AIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGRTKKQEP 116

Query: 190 A 192
           A
Sbjct: 117 A 117


>emb|CBI25992.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = +1

Query: 10  APEKDKAYPRDFMERGRVRVLLKKEDGTLYNPAVATRKQLMLQVAELLPRHAGRTKKQEP 189
           A E DKAYPRDFM+RGRVRVLLKKEDGTLYNPA+++RK+LM  VAEL+PRH GR KKQEP
Sbjct: 134 AIEIDKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQEP 193

Query: 190 A 192
           A
Sbjct: 194 A 194


>ref|XP_002265249.1| PREDICTED: signal recognition particle 19 kDa protein [Vitis
           vinifera]
          Length = 135

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = +1

Query: 10  APEKDKAYPRDFMERGRVRVLLKKEDGTLYNPAVATRKQLMLQVAELLPRHAGRTKKQEP 189
           A E DKAYPRDFM+RGRVRVLLKKEDGTLYNPA+++RK+LM  VAEL+PRH GR KKQEP
Sbjct: 57  AIEIDKAYPRDFMQRGRVRVLLKKEDGTLYNPAISSRKELMRHVAELVPRHPGRVKKQEP 116

Query: 190 A 192
           A
Sbjct: 117 A 117


>ref|XP_002528776.1| signal recognition particle 19 kD protein, putative [Ricinus
           communis] gi|223531779|gb|EEF33598.1| signal recognition
           particle 19 kD protein, putative [Ricinus communis]
          Length = 136

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = +1

Query: 10  APEKDKAYPRDFMERGRVRVLLKKEDGTLYNPAVATRKQLMLQVAELLPRHAGRTKKQEP 189
           A E DKAYPRDFM+ GRVRVLLK+ DGTLYNPA+ TRKQLML VAEL+PRH GRTKKQEP
Sbjct: 58  AIEIDKAYPRDFMQIGRVRVLLKRGDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQEP 117

Query: 190 A 192
           A
Sbjct: 118 A 118


>ref|XP_002519304.1| signal recognition particle 19 kD protein, putative [Ricinus
           communis] gi|223541619|gb|EEF43168.1| signal recognition
           particle 19 kD protein, putative [Ricinus communis]
          Length = 136

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = +1

Query: 10  APEKDKAYPRDFMERGRVRVLLKKEDGTLYNPAVATRKQLMLQVAELLPRHAGRTKKQEP 189
           A E DKAYPRDFM+ GRVRVLLK+EDGTLYNPA+ TRKQLML VAEL+PRH GRTKKQE 
Sbjct: 58  AIEIDKAYPRDFMQIGRVRVLLKREDGTLYNPAIPTRKQLMLHVAELVPRHPGRTKKQES 117

Query: 190 A 192
           A
Sbjct: 118 A 118


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