BLASTX nr result

ID: Coptis23_contig00015529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015529
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31243.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_003624699.1| High affinity cationic amino acid transporte...   117   7e-25
ref|XP_003624701.1| High affinity cationic amino acid transporte...   117   7e-25
emb|CBI31244.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid...   117   1e-24

>emb|CBI31243.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/122 (53%), Positives = 84/122 (68%)
 Frame = -1

Query: 407 FMDVSQLAGMVSVGTLLAFTIVAISILILRYIPPALVPLPPSLQESINSESIPDSSNNQE 228
           FMDVSQLAGMVSVGTLLAFT VAIS+LILRY+PP  VPL  SLQE ++S +     + Q+
Sbjct: 395 FMDVSQLAGMVSVGTLLAFTTVAISVLILRYVPPEEVPLVSSLQEPLDSVTSQFHHDTQD 454

Query: 227 NNDINPKDIAGISGNSRQHLQADAEASLAYPLIIKDIDQDEFDEQKRRRVAAWGITSACM 48
                 K++ G   + RQ L  + E+ + YPL  K++ QD  +EQKRR++AAW IT  C+
Sbjct: 455 IGTETSKNLLGSCEDDRQPLLGEEESLIGYPLNKKELAQDVQNEQKRRKIAAWSITLLCI 514

Query: 47  GV 42
           GV
Sbjct: 515 GV 516


>ref|XP_003624699.1| High affinity cationic amino acid transporter [Medicago truncatula]
           gi|87162739|gb|ABD28534.1| Amino acid/polyamine
           transporter I [Medicago truncatula]
           gi|355499714|gb|AES80917.1| High affinity cationic amino
           acid transporter [Medicago truncatula]
          Length = 636

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/122 (47%), Positives = 86/122 (70%)
 Frame = -1

Query: 407 FMDVSQLAGMVSVGTLLAFTIVAISILILRYIPPALVPLPPSLQESINSESIPDSSNNQE 228
           FMDVSQLAGMVSVGTLLAFT VA+S+LI+RY+PP  +P+P SL  S++        + +E
Sbjct: 389 FMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEIPIPASLLTSVDPLLRHSGDDIEE 448

Query: 227 NNDINPKDIAGISGNSRQHLQADAEASLAYPLIIKDIDQDEFDEQKRRRVAAWGITSACM 48
           +  ++P D+A  S NS  HL   ++  L +PLIIK++ +++ +E+ RR++AAW I   C+
Sbjct: 449 DRTVSPVDLASYSDNS--HLHDKSDVLLEHPLIIKEVTKEQHNEKTRRKLAAWTIALLCI 506

Query: 47  GV 42
           G+
Sbjct: 507 GI 508


>ref|XP_003624701.1| High affinity cationic amino acid transporter [Medicago truncatula]
           gi|355499716|gb|AES80919.1| High affinity cationic amino
           acid transporter [Medicago truncatula]
          Length = 530

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/122 (47%), Positives = 86/122 (70%)
 Frame = -1

Query: 407 FMDVSQLAGMVSVGTLLAFTIVAISILILRYIPPALVPLPPSLQESINSESIPDSSNNQE 228
           FMDVSQLAGMVSVGTLLAFT VA+S+LI+RY+PP  +P+P SL  S++        + +E
Sbjct: 389 FMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPDEIPIPASLLTSVDPLLRHSGDDIEE 448

Query: 227 NNDINPKDIAGISGNSRQHLQADAEASLAYPLIIKDIDQDEFDEQKRRRVAAWGITSACM 48
           +  ++P D+A  S NS  HL   ++  L +PLIIK++ +++ +E+ RR++AAW I   C+
Sbjct: 449 DRTVSPVDLASYSDNS--HLHDKSDVLLEHPLIIKEVTKEQHNEKTRRKLAAWTIALLCI 506

Query: 47  GV 42
           G+
Sbjct: 507 GI 508


>emb|CBI31244.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 2/124 (1%)
 Frame = -1

Query: 407 FMDVSQLAGMVSVGTLLAFTIVAISILILRYIPPALVPLPPSLQESINSESIPDSSNNQE 228
           FMDVSQLAGMVSVGTLLAFT+VA S+LILRY+PP  VPL PS QESI++ S+  SS+NQ+
Sbjct: 369 FMDVSQLAGMVSVGTLLAFTMVACSVLILRYVPPDEVPLTPSHQESIDTVSLQHSSSNQK 428

Query: 227 NNDINPKDIAGISGNSRQHLQADAEASLAYPLIIKDIDQDEF--DEQKRRRVAAWGITSA 54
            ++ N K  AG S    + L A   AS A P+++K++  D +  DE  RR++A W I   
Sbjct: 429 IDEENSKVCAGPSNEITRPLIAKEGAS-ADPVVVKNVVLDRYIIDENMRRKIAGWTIMLT 487

Query: 53  CMGV 42
           C+GV
Sbjct: 488 CVGV 491


>ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 639

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/124 (54%), Positives = 87/124 (70%), Gaps = 2/124 (1%)
 Frame = -1

Query: 407 FMDVSQLAGMVSVGTLLAFTIVAISILILRYIPPALVPLPPSLQESINSESIPDSSNNQE 228
           FMDVSQLAGMVSVGTLLAFT+VA S+LILRY+PP  VPL PS QESI++ S+  SS+NQ+
Sbjct: 389 FMDVSQLAGMVSVGTLLAFTMVACSVLILRYVPPDEVPLTPSHQESIDTVSLQHSSSNQK 448

Query: 227 NNDINPKDIAGISGNSRQHLQADAEASLAYPLIIKDIDQDEF--DEQKRRRVAAWGITSA 54
            ++ N K  AG S    + L A   AS A P+++K++  D +  DE  RR++A W I   
Sbjct: 449 IDEENSKVCAGPSNEITRPLIAKEGAS-ADPVVVKNVVLDRYIIDENMRRKIAGWTIMLT 507

Query: 53  CMGV 42
           C+GV
Sbjct: 508 CVGV 511


Top