BLASTX nr result

ID: Coptis23_contig00015516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015516
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12
ref|XP_003569593.1| PREDICTED: uncharacterized protein LOC100821...    77   6e-12
ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus c...    77   6e-12
emb|CBI15487.3| unnamed protein product [Vitis vinifera]               76   8e-12
ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein...    74   5e-11

>ref|XP_002316043.1| predicted protein [Populus trichocarpa] gi|222865083|gb|EEF02214.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
 Frame = -2

Query: 582 SMYCPYGYTNIEYPFNNEDRNFSFGTWGEGYPGLMIKCLDNRPFINISNHLYLVQEISYD 403
           S  C      I YPF ++ + F       GYPG  I C D  P I +SN LY +  I++ 
Sbjct: 35  SFDCGGNGITISYPFWHQSQQFEHC----GYPGFNISCSDQNPMIYLSNDLYPITNINHS 90

Query: 402 RQIVTIVDADIEGQDCPQPRRNFSLSDSTPYLQRRYYDFDNAIFFYNCTNNNHNYSVAQL 223
            + +T+    I   DCP+   +    +STP L           FFYNCT    +      
Sbjct: 91  SKSLTLHHTKIRRADCPKAPHDTITVNSTPSLFNSTLGNKMLHFFYNCTLYPPS---LPH 147

Query: 222 LPCLDNYNNSNTNERSYAFDQDSIPKGFDGYRTCSESVVAPYF-------PVGRNFSQVF 64
           + CL         ++SY F + + P+ FD +R C ESVV+           + + F +  
Sbjct: 148 IACL-----QYGIKQSYVFLEGATPE-FDWHRYC-ESVVSALVSDEAVSGDLVQGFGRAL 200

Query: 63  KLGFELSW-STPTECQDCEKSG 1
           + GF+L+W     ECQ CE SG
Sbjct: 201 QGGFKLTWKQLDGECQSCEASG 222


>ref|XP_003569593.1| PREDICTED: uncharacterized protein LOC100821607 [Brachypodium
           distachyon]
          Length = 281

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 66/203 (32%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
 Frame = -2

Query: 564 GYTNIEYPFNNEDRNFSFGTWGEGYPGLMIKCLDNRPFINIS-NHLYLVQEISYDRQIVT 388
           G   I YPF     + S      GYPGL + C +N   I ++ +H Y V  I YD   ++
Sbjct: 30  GEQTIAYPFWLNSSS-SASPSSCGYPGLGLACENNTTLIFLAQSHRYRVSSIDYDTHTIS 88

Query: 387 IVDADIEGQDCPQPRRNFSLS-DSTPYLQRRYYDFDNAIFFYNCTNNNHNYSVAQLLPCL 211
           + DAD        P  +F+L+ D+   LQ  + D  N  FFY+C  N    S  +L  C 
Sbjct: 89  LADADAFTTTTGCPLLDFNLTIDTISALQLSHAD-SNITFFYDCKKNASWTSAVELSSCP 147

Query: 210 DNYNNSNTNERSYAFDQDSIPKGFDGYR---TCSESVVAPY----------FPVGRNFSQ 70
             YN S     SY F  D    G+ G      C  +VVAP           FP+   +  
Sbjct: 148 AAYNKS-----SYVFQGD----GYAGEAYEFECQAAVVAPVLEVHKKGLADFPLATRYVD 198

Query: 69  VFKLGFELSWS-TPTECQDCEKS 4
           V K GFEL++S    +C  CE+S
Sbjct: 199 VLKAGFELNYSPNSDQCGRCERS 221


>ref|XP_002524902.1| hypothetical protein RCOM_0725500 [Ricinus communis]
           gi|223535865|gb|EEF37526.1| hypothetical protein
           RCOM_0725500 [Ricinus communis]
          Length = 257

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 64/201 (31%), Positives = 89/201 (44%), Gaps = 10/201 (4%)
 Frame = -2

Query: 573 CPYGYTNIEYPFNNEDRNFSFGTWGEGYPGLMIKCL-DNRPFINISNHLYLVQEISYDRQ 397
           C  G T I+YPF    +N S      GYP L + C  D+ P + + N  Y V+ I+Y   
Sbjct: 39  CGNGVT-IKYPFWY--KNNSTPDQYCGYPKLGLSCSNDDEPVLGLPNDSYYVKNINYTDS 95

Query: 396 IVTIVDADIEGQDCPQPRRNFSLSDSTPYLQRRYYDFD-NAIFFYNCTNNNHNYSVAQL- 223
            +T+VD D+ GQ CP+ R N +L +    L   Y D + N  F++NCT+N  + + +   
Sbjct: 96  TITLVDIDVVGQTCPRARHNLTLDN----LPLNYTDLNLNLSFYFNCTSNPSSSNTSLFG 151

Query: 222 LPCLDNYNNSNTNERSYAFDQDSIPKGFDGYRTCSESVVAPYFP---VGRN----FSQVF 64
           + CL       T +      +D      D    C + VVA        G N    F    
Sbjct: 152 IECL----GVGTTQSYVVMTEDD---EVDWIGKCMDHVVATVMRTEITGINLITGFGAAM 204

Query: 63  KLGFELSWSTPTECQDCEKSG 1
             GF L W T  EC  CE SG
Sbjct: 205 NQGFVLDWRTVKECGACEVSG 225


>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
 Frame = -2

Query: 555 NIEYPFNNEDRNFSFGTWGEGYPGLMIKCLDNRPFINISNHLYLVQEISYDRQIVTIVDA 376
           N+ YPF       S+     G+P   I C D +P + IS+  Y+++EI Y      + ++
Sbjct: 361 NVSYPFWIPKEQESYC----GFPNFSITCNDEKPVLTISDDYYVIREIFYTNHSFLMSNS 416

Query: 375 DI-EGQDCPQPRRNFSLSDSTPY-LQRRYYDFDNAIFFYNCTNNNHNYSVAQLLPCLDNY 202
            + +G  CP P  NFSL D TP+     +YD    + FYNCT    +  V  L   +D  
Sbjct: 417 AVYDGDSCPTPLHNFSL-DRTPFNYSPSHYDL---LLFYNCT----SVPVETLTIPIDCM 468

Query: 201 NNSNTNERSYAFDQDSIPKGFDGYRTCSESVVAPYFPVGR---------NFSQVFKLGFE 49
           +N+  +  + +F ++++        +C   V  P    G          NF+++ + GF 
Sbjct: 469 SNATLHSFA-SFHEEALEYMNFSTESCQSMVNVPVDIDGEEGFGNLLNWNFTEILREGFV 527

Query: 48  LSWSTPTECQDCEKSG 1
           LSW T   C  CE+SG
Sbjct: 528 LSW-TANNCSSCERSG 542


>ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 645

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
 Frame = -2

Query: 555 NIEYPFNNEDRNFSFGTWGEGYPGLMIKCLDNRPFINISNHLYLVQEISYDRQIVTIVDA 376
           NI YPF     +  F     G+P   I C D  P I ISN  Y++++ISY      + + 
Sbjct: 41  NISYPFWIAHSHSPFC----GFPSFRISCKDENPIIRISNEDYIIRDISYKNHSFLLTND 96

Query: 375 DIEGQDCPQPRRNFSLSDSTPYLQRRYYDFDNAIFFYNCTNNNHNYSVAQLLPCLDNYNN 196
            +   +C  P  NFSL   TP+      D     FFYNCT+   NYS    + C     +
Sbjct: 97  AVYDSNCLTPLHNFSL-HRTPFSYSS--DHIGFFFFYNCTSLPPNYSYP--IDC-----S 146

Query: 195 SNTNERSY-AFDQDSIPKGFDGYRTCSESVVAPY----------FPVGRNFSQVFKLGFE 49
           S +   S+ AF +  +        +C  SV  P             + +N++ + K+GF 
Sbjct: 147 STSKLHSFGAFHEGYLEFMNFSSNSCQSSVEVPMDFNNEDDDFTGLLRKNYTDLLKMGFS 206

Query: 48  LSWSTPTECQDCEKSG 1
           L+WS  + C  C+ SG
Sbjct: 207 LNWSGQS-CSTCDTSG 221


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