BLASTX nr result

ID: Coptis23_contig00015503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015503
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38912.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854...   401   e-109
gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides]      379   e-103
ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779...   373   e-101
ref|XP_002511656.1| conserved hypothetical protein [Ricinus comm...   372   e-100

>emb|CBI38912.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/339 (57%), Positives = 255/339 (75%), Gaps = 4/339 (1%)
 Frame = +1

Query: 154  AVGATEGFSMSQAM-SLSTFPTAVITAT-PSIRSRSLGSWKVMRPLHSFTLPCFQLKHPP 327
            ++ A +  +++Q M SL+  P+ + + T P++  R +  ++    LH FT P  ++KHPP
Sbjct: 80   SIKAAKVSNVNQGMASLAQAPSTMASVTVPNVHHRGMKLFQPSISLHGFTFPHIRIKHPP 139

Query: 328  IFCTKLSSWEPSPTTYAPSEDDDDDGNFLQKGANIFETMNAETPTETMVSNKED--GTKE 501
            + CTKL+ WEPSP TY+P+++   D  FL+  +NIFET+N++   E  V+N E+   T  
Sbjct: 140  VCCTKLTPWEPSPVTYSPTDEKGSD--FLRGTSNIFETLNSDDTAEAPVTNTEELIHTSN 197

Query: 502  QASVQSQPLKWPMWLLGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGA 681
            Q+S Q Q LKWPMWLLGPS+LL TG+VPTLWLP+SS+FLG N ASLLSL+GLDCIFN+GA
Sbjct: 198  QSSGQLQFLKWPMWLLGPSLLLATGMVPTLWLPISSIFLGPNIASLLSLIGLDCIFNLGA 257

Query: 682  TLFLLMADACARPKNASQTLTSQAPLSYKFWNMVASVMGWLIPLGMLFASQKGLLQAQLP 861
            TLFLLMADACARPKN +Q L S+AP SY+FWN+VA++ G+++PL + F SQ G  Q QLP
Sbjct: 258  TLFLLMADACARPKNLAQPLNSKAPFSYQFWNVVATITGFVVPLIVFFGSQNGFFQPQLP 317

Query: 862  LMSFGVXXXXXXXXXSIQMLTEMLTWYWQSPVWLITPVVYEAYRVLQLLRGLKLSAEIGA 1041
             + F V         S+Q+LTEMLTW+WQSPVWL+TPVVYEAYRVLQL+RGLKL AE+ A
Sbjct: 318  FIPFAVLMGPYLLLLSVQILTEMLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLGAELSA 377

Query: 1042 PMWIVETIRGLVSWWVLILGVQLMRVAWFAGFSARARQQ 1158
            P W++ T+RGLV WWVLILG+Q+MRVAWFAGF+A A  Q
Sbjct: 378  PAWMMHTVRGLVCWWVLILGMQVMRVAWFAGFTAGAWPQ 416


>ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854105 [Vitis vinifera]
          Length = 332

 Score =  401 bits (1030), Expect = e-109
 Identities = 192/324 (59%), Positives = 246/324 (75%), Gaps = 3/324 (0%)
 Frame = +1

Query: 196  SLSTFPTAVITAT-PSIRSRSLGSWKVMRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTT 372
            SL+  P+ + + T P++  R +  ++    LH FT P  ++KHPP+ CTKL+ WEPSP T
Sbjct: 3    SLAQAPSTMASVTVPNVHHRGMKLFQPSISLHGFTFPHIRIKHPPVCCTKLTPWEPSPVT 62

Query: 373  YAPSEDDDDDGNFLQKGANIFETMNAETPTETMVSNKED--GTKEQASVQSQPLKWPMWL 546
            Y+P+++   D  FL+  +NIFET+N++   E  V+N E+   T  Q+S Q Q LKWPMWL
Sbjct: 63   YSPTDEKGSD--FLRGTSNIFETLNSDDTAEAPVTNTEELIHTSNQSSGQLQFLKWPMWL 120

Query: 547  LGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACARPKN 726
            LGPS+LL TG+VPTLWLP+SS+FLG N ASLLSL+GLDCIFN+GATLFLLMADACARPKN
Sbjct: 121  LGPSLLLATGMVPTLWLPISSIFLGPNIASLLSLIGLDCIFNLGATLFLLMADACARPKN 180

Query: 727  ASQTLTSQAPLSYKFWNMVASVMGWLIPLGMLFASQKGLLQAQLPLMSFGVXXXXXXXXX 906
             +Q L S+AP SY+FWN+VA++ G+++PL + F SQ G  Q QLP + F V         
Sbjct: 181  LAQPLNSKAPFSYQFWNVVATITGFVVPLIVFFGSQNGFFQPQLPFIPFAVLMGPYLLLL 240

Query: 907  SIQMLTEMLTWYWQSPVWLITPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLVSWW 1086
            S+Q+LTEMLTW+WQSPVWL+TPVVYEAYRVLQL+RGLKL AE+ AP W++ T+RGLV WW
Sbjct: 241  SVQILTEMLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLGAELSAPAWMMHTVRGLVCWW 300

Query: 1087 VLILGVQLMRVAWFAGFSARARQQ 1158
            VLILG+Q+MRVAWFAGF+A A  Q
Sbjct: 301  VLILGMQVMRVAWFAGFTAGAWPQ 324


>gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 332

 Score =  379 bits (974), Expect = e-103
 Identities = 187/318 (58%), Positives = 229/318 (72%), Gaps = 2/318 (0%)
 Frame = +1

Query: 211  PTAVITATPSIRSRSLGSWKVMRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTTYAPSED 390
            PT        +  R L     +   H    P   + H  + C KL+ WEPSP TYAP+ D
Sbjct: 9    PTMSTINAHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCAKLTPWEPSPVTYAPTID 68

Query: 391  DDDDGNFLQKGANIFETMNAETPTETMVSNKED--GTKEQASVQSQPLKWPMWLLGPSIL 564
                GN L+K +NIFET+ +E   E   +N E+   TK ++ VQ Q LKWPMWLLGPS+L
Sbjct: 69   AS--GNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNRSLVQFQFLKWPMWLLGPSLL 126

Query: 565  LVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACARPKNASQTLT 744
            L TG+VPTLWLPLSSVFLG N ASLLSL+GLDCIFN+GATLFLLMAD+C+R KN +QT  
Sbjct: 127  LTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKNQAQTCN 186

Query: 745  SQAPLSYKFWNMVASVMGWLIPLGMLFASQKGLLQAQLPLMSFGVXXXXXXXXXSIQMLT 924
            S+ PLSYKFWN+VA+V G++IPL  L  SQKG L  QLP + F V         S+Q+LT
Sbjct: 187  SKPPLSYKFWNVVATVSGFVIPLMALLGSQKGTLLPQLPFIPFAVLLGPYMLLLSVQILT 246

Query: 925  EMLTWYWQSPVWLITPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLVSWWVLILGV 1104
            E+LTW+WQSPVWL+TPVVYE+YR+LQL+RGLKL AE+ AP W++  IRGLVSWW+LILGV
Sbjct: 247  ELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWWILILGV 306

Query: 1105 QLMRVAWFAGFSARARQQ 1158
            QLM VAWFAGF+AR++QQ
Sbjct: 307  QLMSVAWFAGFAARSQQQ 324


>ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779126 [Glycine max]
          Length = 343

 Score =  373 bits (957), Expect = e-101
 Identities = 183/322 (56%), Positives = 231/322 (71%), Gaps = 4/322 (1%)
 Frame = +1

Query: 241  IRSRSLGSWKV--MRPLHSFTLPCFQLKHPPIFCTKLSSWEPSPTTYAPSEDDDDDGNFL 414
            + SRS G  K   +  L     P   +    I CTKL+ WE SP TYAP+++  D   FL
Sbjct: 23   VHSRSQGLLKSGKLSQLQGSAFPSIHINQSCICCTKLTPWESSPVTYAPTDNQSD--TFL 80

Query: 415  QKGANIFETMNAETPTETMVSNKED--GTKEQASVQSQPLKWPMWLLGPSILLVTGIVPT 588
             + ANIFET+ +    E+ ++N E    T  Q  +Q Q  KWP+WLLGPSILL TG+VPT
Sbjct: 81   PQSANIFETLESSKTAESPIANAEGVLETGSQPGLQFQFFKWPLWLLGPSILLATGMVPT 140

Query: 589  LWLPLSSVFLGANTASLLSLVGLDCIFNIGATLFLLMADACARPKNASQTLTSQAPLSYK 768
            LWLP+SS+FLG N ASLLSL+GLDCIFN+GATLFLLMADAC+RPK+ +Q   S+AP SY+
Sbjct: 141  LWLPISSIFLGTNIASLLSLIGLDCIFNLGATLFLLMADACSRPKSLTQDCKSKAPFSYQ 200

Query: 769  FWNMVASVMGWLIPLGMLFASQKGLLQAQLPLMSFGVXXXXXXXXXSIQMLTEMLTWYWQ 948
            FWN+VA++ G++IPL ++F SQKG LQ QLP + F V         S+Q LTEMLTW+WQ
Sbjct: 201  FWNIVATLTGFIIPLLVMFGSQKGFLQPQLPFIPFAVLLGPYLLLLSVQFLTEMLTWHWQ 260

Query: 949  SPVWLITPVVYEAYRVLQLLRGLKLSAEIGAPMWIVETIRGLVSWWVLILGVQLMRVAWF 1128
            SPVWL+TPV+YE+YRVLQL+RGLKL  E+ AP W++ TIRGLV WWVLILG+QLMRVAWF
Sbjct: 261  SPVWLVTPVIYESYRVLQLMRGLKLGVELSAPAWVMHTIRGLVCWWVLILGLQLMRVAWF 320

Query: 1129 AGFSARARQQT*NSVVAPMSSD 1194
            AG +AR R+Q  +S  +  + D
Sbjct: 321  AGLAARTRKQQLSSDTSSANGD 342


>ref|XP_002511656.1| conserved hypothetical protein [Ricinus communis]
            gi|223548836|gb|EEF50325.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  372 bits (954), Expect = e-100
 Identities = 182/278 (65%), Positives = 213/278 (76%)
 Frame = +1

Query: 325  PIFCTKLSSWEPSPTTYAPSEDDDDDGNFLQKGANIFETMNAETPTETMVSNKEDGTKEQ 504
            P  CTKL  WEPSP TY P+  DD  G+FL+K +NIFETM++   TE   S +   TK Q
Sbjct: 60   PFCCTKLPPWEPSPVTYVPT--DDAAGSFLKKSSNIFETMDSSDGTEAN-SEEHSDTKNQ 116

Query: 505  ASVQSQPLKWPMWLLGPSILLVTGIVPTLWLPLSSVFLGANTASLLSLVGLDCIFNIGAT 684
               Q Q LKWPMWLLGPS+LL TG+VPTLWLPLSS+FLG N ASLLSL+GLDCIFNIGAT
Sbjct: 117  PLTQFQFLKWPMWLLGPSLLLTTGMVPTLWLPLSSIFLGPNIASLLSLIGLDCIFNIGAT 176

Query: 685  LFLLMADACARPKNASQTLTSQAPLSYKFWNMVASVMGWLIPLGMLFASQKGLLQAQLPL 864
            LFLLMAD+ +RPK+ +Q   S+ P SYK WNM ASV G++ PL ML  SQ G LQ QLP 
Sbjct: 177  LFLLMADSISRPKSLAQAGNSKPPFSYKLWNMAASVSGFVFPLMMLLGSQNGSLQPQLPF 236

Query: 865  MSFGVXXXXXXXXXSIQMLTEMLTWYWQSPVWLITPVVYEAYRVLQLLRGLKLSAEIGAP 1044
            +SF V         S+Q+LTEMLTW+WQSPVWL+TPVVYEAYRVLQL+RGLKL AE+ AP
Sbjct: 237  ISFTVLLGPYLLLLSVQILTEMLTWHWQSPVWLMTPVVYEAYRVLQLMRGLKLGAELSAP 296

Query: 1045 MWIVETIRGLVSWWVLILGVQLMRVAWFAGFSARARQQ 1158
             W++  IRGLV WW+L+LG+QLMRVAWFAGF+ARA QQ
Sbjct: 297  AWMMHMIRGLVCWWILVLGIQLMRVAWFAGFTARAHQQ 334


Top