BLASTX nr result

ID: Coptis23_contig00015497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015497
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156029.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-pro...    84   2e-14
ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subuni...    84   2e-14
dbj|BAK08331.1| predicted protein [Hordeum vulgare subsp. vulgare]     81   8e-14
ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...    81   1e-13
ref|XP_003628452.1| Cell division cycle protein-like protein [Me...    80   2e-13

>ref|XP_004156029.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit
           6-like [Cucumis sativus]
          Length = 497

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   LLERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYSQK 127
           LLE+DPFHLKSTLVHL AAMELGHSNELYLMACNLVKDY QK
Sbjct: 271 LLEKDPFHLKSTLVHLAAAMELGHSNELYLMACNLVKDYPQK 312


>ref|XP_004146390.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
           sativus]
          Length = 547

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/42 (92%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   LLERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYSQK 127
           LLE+DPFHLKSTLVHL AAMELGHSNELYLMACNLVKDY QK
Sbjct: 271 LLEKDPFHLKSTLVHLAAAMELGHSNELYLMACNLVKDYPQK 312


>dbj|BAK08331.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 584

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +2

Query: 2   LLERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYSQK 127
           LLERDPFHLKSTLVHL AAMELGHSN+LYL++CNLVKDY QK
Sbjct: 312 LLERDPFHLKSTLVHLAAAMELGHSNDLYLLSCNLVKDYPQK 353


>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
           gi|302142883|emb|CBI20178.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   LLERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYSQK 127
           LLE+DPFH+K TLVHL AAMELGHSNELYLMACNLVKDY QK
Sbjct: 269 LLEKDPFHMKCTLVHLAAAMELGHSNELYLMACNLVKDYPQK 310


>ref|XP_003628452.1| Cell division cycle protein-like protein [Medicago truncatula]
           gi|355522474|gb|AET02928.1| Cell division cycle
           protein-like protein [Medicago truncatula]
          Length = 645

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/42 (88%), Positives = 39/42 (92%)
 Frame = +2

Query: 2   LLERDPFHLKSTLVHLTAAMELGHSNELYLMACNLVKDYSQK 127
           LLE+DPFH+KSTLVHL AAMELG SNELYLMACNLVKDY QK
Sbjct: 298 LLEKDPFHIKSTLVHLAAAMELGQSNELYLMACNLVKDYPQK 339


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