BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015483
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN72041.1| putative RNA helicase [Arabidopsis thaliana]            86   3e-15
ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabido...    86   3e-15
ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arab...    86   3e-15
ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arab...    83   3e-14
ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    82   6e-14

>gb|AAN72041.1| putative RNA helicase [Arabidopsis thaliana]
          Length = 559

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/100 (51%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -1

Query: 282 ATKAGISGPSSAPLLQNXXXXXXXXXXXXXXXXGTATVLPGV------TLPNEXXXXXXX 121
           A KA  + P SAP+  N                     +PGV      TLP+E       
Sbjct: 388 AAKAAAAAPVSAPVTANQLLANGGGL----------AAMPGVLPVTVPTLPSEGAGRAAA 437

Query: 120 XXXAMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKV 1
              AMNLQHNLAKIQADAMPEHYEAE EINDFPQNARWKV
Sbjct: 438 MVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKV 477


>ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
            gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName:
            Full=DEAD-box ATP-dependent RNA helicase 42
            gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA
            helicases [Arabidopsis thaliana]
            gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA
            helicase 42 [Arabidopsis thaliana]
          Length = 1166

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/100 (51%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -1

Query: 282  ATKAGISGPSSAPLLQNXXXXXXXXXXXXXXXXGTATVLPGV------TLPNEXXXXXXX 121
            A KA  + P SAP+  N                     +PGV      TLP+E       
Sbjct: 995  AAKAAAAAPVSAPVTANQLLANGGGL----------AAMPGVLPVTVPTLPSEGAGRAAA 1044

Query: 120  XXXAMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKV 1
               AMNLQHNLAKIQADAMPEHYEAE EINDFPQNARWKV
Sbjct: 1045 MVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKV 1084


>ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
           gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA
           helicase 42 [Arabidopsis thaliana]
          Length = 828

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/100 (51%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = -1

Query: 282 ATKAGISGPSSAPLLQNXXXXXXXXXXXXXXXXGTATVLPGV------TLPNEXXXXXXX 121
           A KA  + P SAP+  N                     +PGV      TLP+E       
Sbjct: 657 AAKAAAAAPVSAPVTANQLLANGGGL----------AAMPGVLPVTVPTLPSEGAGRAAA 706

Query: 120 XXXAMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARWKV 1
              AMNLQHNLAKIQADAMPEHYEAE EINDFPQNARWKV
Sbjct: 707 MVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKV 746


>ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
           lyrata] gi|297336257|gb|EFH66674.1| hypothetical protein
           ARALYDRAFT_472328 [Arabidopsis lyrata subsp. lyrata]
          Length = 827

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/62 (69%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
 Frame = -1

Query: 168 LPGV------TLPNEXXXXXXXXXXAMNLQHNLAKIQADAMPEHYEAEFEINDFPQNARW 7
           +PGV      TLP+E          AMNLQHNLAKIQADAMPEHYEAE EINDFPQNARW
Sbjct: 684 MPGVLPVTVPTLPSEGAGRAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARW 743

Query: 6   KV 1
           KV
Sbjct: 744 KV 745


>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            42-like [Cucumis sativus]
          Length = 1098

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/93 (53%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = -1

Query: 267  ISGPSSAP-LLQNXXXXXXXXXXXXXXXXGTATVLPGVTLP---NEXXXXXXXXXXAMNL 100
            I+ PSSA  LL N                GT  V+P  TLP   N+          AMNL
Sbjct: 924  ITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTNDGAAARAALAAAMNL 983

Query: 99   QHNLAKIQADAMPEHYEAEFEINDFPQNARWKV 1
            QHNLAKIQA A+PEHYEAE EINDFPQNARWKV
Sbjct: 984  QHNLAKIQASAIPEHYEAELEINDFPQNARWKV 1016