BLASTX nr result
ID: Coptis23_contig00015480
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015480
(598 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003551615.1| PREDICTED: ataxin-10-like [Glycine max] 137 1e-41
ref|XP_003623813.1| Ataxin-10 [Medicago truncatula] gi|355498828... 136 8e-41
ref|XP_002274705.1| PREDICTED: uncharacterized protein LOC100264... 125 1e-40
ref|XP_003533665.1| PREDICTED: LOW QUALITY PROTEIN: ataxin-10-li... 135 7e-40
ref|XP_002320751.1| predicted protein [Populus trichocarpa] gi|2... 124 3e-36
>ref|XP_003551615.1| PREDICTED: ataxin-10-like [Glycine max]
Length = 498
Score = 137 bits (344), Expect(2) = 1e-41
Identities = 75/130 (57%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Frame = +1
Query: 214 KSGLPTGIPAVDVLGYSITILRDVCA--GSVTDSAGSVTVVDSXXXXXXXXXXXXXXXXX 387
KSGLP+G VDVLGYS+TILRD+CA G ++ S VVD+
Sbjct: 306 KSGLPSGFVGVDVLGYSLTILRDICAQDGVRGNTEDSNDVVDALLSYGLIELLLYLLEAL 365
Query: 388 EPPEIIRNSSSRGENQDSAHDLLKKSPYKGFRRDIVAVIGNCLYGRKHAQDEIRQRNGIV 567
EPP IIR + ENQD A K PYKGFRRDIVA+IGNC+Y RKHAQDEIR RNGI+
Sbjct: 366 EPPAIIRKGLKQCENQDGASCSFKPCPYKGFRRDIVALIGNCVYRRKHAQDEIRHRNGIL 425
Query: 568 LLL*QCVTDE 597
LLL QCVTDE
Sbjct: 426 LLLQQCVTDE 435
Score = 58.9 bits (141), Expect(2) = 1e-41
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +2
Query: 2 LVSKLCLEESQFPTFFYQLGMNVVVNSEDLNCKVAVFSEEQAFLLGVLSEVLNQQTDDIS 181
L+S++CLEESQ P F +L V E K FS EQAFLL +LSE+LN++ D++
Sbjct: 220 LLSRICLEESQLPVLFSKLQFADVPKVEVAESKDDHFSFEQAFLLRILSEILNERHKDVT 279
Query: 182 VSNECIMCVLG 214
VS + + V G
Sbjct: 280 VSKDVALFVFG 290
>ref|XP_003623813.1| Ataxin-10 [Medicago truncatula] gi|355498828|gb|AES80031.1|
Ataxin-10 [Medicago truncatula]
Length = 491
Score = 136 bits (342), Expect(2) = 8e-41
Identities = 73/129 (56%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Frame = +1
Query: 214 KSGLPTGIPAVDVLGYSITILRDVCA-GSVTDSAGSVTVVDSXXXXXXXXXXXXXXXXXE 390
KSGLP+GI VDVLGYS+T+LRD+CA SV ++ VVD E
Sbjct: 298 KSGLPSGITDVDVLGYSLTMLRDICAHDSVRGNSEDTEVVDMLLSYGLIELVFILLGDLE 357
Query: 391 PPEIIRNSSSRGENQDSAHDLLKKSPYKGFRRDIVAVIGNCLYGRKHAQDEIRQRNGIVL 570
PP IIR EN D A K PYKGFRRDIVA+IGNC+Y RKH QDEIR RNGI+L
Sbjct: 358 PPTIIRKGMKHSENPDGASSSSKPCPYKGFRRDIVALIGNCVYRRKHVQDEIRSRNGILL 417
Query: 571 LL*QCVTDE 597
LL QCVTDE
Sbjct: 418 LLQQCVTDE 426
Score = 56.6 bits (135), Expect(2) = 8e-41
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +2
Query: 2 LVSKLCLEESQFPTFFYQLGMNVVVNSEDLNCKVAVFSEEQAFLLGVLSEVLNQQTDDIS 181
L+S++CLE+SQ F +L + + ED K FS EQAFLL ++S++LN++ D++
Sbjct: 212 LLSRICLEDSQLRVLFSKLRFMDIPDGEDTKTKDDQFSSEQAFLLQIISDILNERIGDVT 271
Query: 182 VSNECIMCVLG 214
+S E V G
Sbjct: 272 ISLEVASFVYG 282
>ref|XP_002274705.1| PREDICTED: uncharacterized protein LOC100264428 [Vitis vinifera]
Length = 494
Score = 125 bits (314), Expect(2) = 1e-40
Identities = 70/137 (51%), Positives = 86/137 (62%), Gaps = 4/137 (2%)
Frame = +1
Query: 199 NVCSWKSGLPTGIPAVDVLGYSITILRDVCAGSVTDSA---GSVTVVDSXXXXXXXXXXX 369
+V + KSG G A++VL YS+TIL+++CA S+ GSV VVD
Sbjct: 295 SVSTCKSGFSAGSNAINVLKYSLTILKEICARDAQKSSNEHGSVDVVDLLVSSGLLELLL 354
Query: 370 XXXXXXEPPEIIRNSSSRGENQDSAHDLLKKS-PYKGFRRDIVAVIGNCLYGRKHAQDEI 546
EPP IIR + +GENQD A K PY+GFRRD+VAVIGNC Y RKH Q+EI
Sbjct: 355 CLLRDLEPPAIIRKAIKQGENQDGAASYSPKHYPYRGFRRDLVAVIGNCAYRRKHVQNEI 414
Query: 547 RQRNGIVLLL*QCVTDE 597
R+RNGI+LLL QCVTDE
Sbjct: 415 RERNGILLLLQQCVTDE 431
Score = 66.6 bits (161), Expect(2) = 1e-40
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 2 LVSKLCLEESQFPTFFYQL-GMNVVVNSEDLNCKVAVFSEEQAFLLGVLSEVLNQQTDDI 178
L+S++CLEES FP F +L + N E + KV VF+ EQAFL+ +++E+LN+Q + +
Sbjct: 213 LLSRICLEESHFPMLFSKLCPVGTSGNYESIEFKVDVFASEQAFLMDIVAEILNEQINKM 272
Query: 179 SVSNECIMCVLGNL 220
+VS++ +CVLG L
Sbjct: 273 TVSSDVALCVLGIL 286
>ref|XP_003533665.1| PREDICTED: LOW QUALITY PROTEIN: ataxin-10-like [Glycine max]
Length = 494
Score = 135 bits (339), Expect(2) = 7e-40
Identities = 75/130 (57%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Frame = +1
Query: 214 KSGLPTGIPAVDVLGYSITILRDVCA--GSVTDSAGSVTVVDSXXXXXXXXXXXXXXXXX 387
KSGLP+G VDVLGYS+TILRDVCA G ++ S VVD
Sbjct: 302 KSGLPSGFVGVDVLGYSLTILRDVCAQDGVRGNTEDSNDVVDVLLSYGLIVLLLCLLGAL 361
Query: 388 EPPEIIRNSSSRGENQDSAHDLLKKSPYKGFRRDIVAVIGNCLYGRKHAQDEIRQRNGIV 567
EPP IIR R E +D A +K PYKGFRRDIVA+IGNC+Y RKHAQDEIR RNGI+
Sbjct: 362 EPPAIIRKGLKRCEKEDGASCSIKPCPYKGFRRDIVALIGNCVYRRKHAQDEIRHRNGIL 421
Query: 568 LLL*QCVTDE 597
LLL QCVTDE
Sbjct: 422 LLLQQCVTDE 431
Score = 54.7 bits (130), Expect(2) = 7e-40
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +2
Query: 2 LVSKLCLEESQFPTFFYQL---GMNVVVNSEDLNCKVAVFSEEQAFLLGVLSEVLNQQTD 172
L+S++CLEESQ P F +L + V S+D + FS EQAFLL +LSE+LN++
Sbjct: 218 LLSRICLEESQLPVLFSKLQFADVPKVTESKDDH-----FSFEQAFLLRILSEILNERLK 272
Query: 173 DISVSNECIMCVLG 214
D++VS + + V G
Sbjct: 273 DVTVSKDVALFVFG 286
>ref|XP_002320751.1| predicted protein [Populus trichocarpa] gi|222861524|gb|EEE99066.1|
predicted protein [Populus trichocarpa]
Length = 496
Score = 124 bits (311), Expect(2) = 3e-36
Identities = 66/130 (50%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = +1
Query: 214 KSGLPTGIPAVDVLGYSITILRDVCAGSV-TDSAGSVTVVDSXXXXXXXXXXXXXXXXXE 390
+S LPTG +DVLGYS+TILRD+CA + V VVDS E
Sbjct: 304 ESRLPTGFAVIDVLGYSLTILRDICANNGGVGKEDLVDVVDSLLSSGLLDLLLCLLRDLE 363
Query: 391 PPEIIRNSSSRGENQDSAHDLLKK-SPYKGFRRDIVAVIGNCLYGRKHAQDEIRQRNGIV 567
PP+IIR + ++ NQ++ K PYKGFRRD+VAVIGNC Y RKH QD+IRQ+NG++
Sbjct: 364 PPKIIRKAMNQAGNQEATTSYFPKVCPYKGFRRDLVAVIGNCAYRRKHVQDDIRQKNGML 423
Query: 568 LLL*QCVTDE 597
L+L QCVTDE
Sbjct: 424 LMLQQCVTDE 433
Score = 53.1 bits (126), Expect(2) = 3e-36
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +2
Query: 2 LVSKLCLEESQFPTFFYQLGM--NVVVNSEDLNCKVAVFSEEQAFLLGVLSEVLNQQTDD 175
L+S++CLE+ FP F ++ + N E+++ F EQA+LL ++SE+LN++ +
Sbjct: 216 LLSRICLEDIYFPQLFSRIYSVCSYCENGEEISLSSNPFFTEQAYLLNIVSEILNERLKE 275
Query: 176 ISVSNECIMCVLG 214
I++ N+ +C+ G
Sbjct: 276 ITILNDFALCIFG 288