BLASTX nr result

ID: Coptis23_contig00015470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015470
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC83032.1| Similar to gb|X16648 pathogenesis related protein...   219   5e-92
ref|NP_565189.1| pathogenesis-related protein [Arabidopsis thali...   214   1e-90
ref|XP_002331808.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-90
ref|XP_002317453.1| predicted protein [Populus trichocarpa] gi|2...   217   5e-90
ref|XP_002889208.1| predicted protein [Arabidopsis lyrata subsp....   216   8e-90

>gb|AAC83032.1| Similar to gb|X16648 pathogenesis related protein from Hordeum
            vulgare. EST gb|Z18206 comes from this gene [Arabidopsis
            thaliana]
          Length = 276

 Score =  219 bits (557), Expect(2) = 5e-92
 Identities = 104/165 (63%), Positives = 125/165 (75%), Gaps = 24/165 (14%)
 Frame = -1

Query: 1135 SDKYRSYMSEDEVKNIEWRHGRPPIFDHVNELFEKERT---------------------- 1022
            +DKYRS +++++  NI WR+G PPIFD VN+LFE+ERT                      
Sbjct: 19   ADKYRSILNDEKTGNIRWRYGGPPIFDTVNKLFEEERTHVQWRYDNPPDFNSVNQLFEEG 78

Query: 1021 --KIWPEGSLEETVQNAIKTWEMELSHKTQIQDFKTINPEKFKLFVNGREGLSGQETLEM 848
              K+WPEGSLEETVQNAIK+WEME SHK ++QDFKTINPEKFKLFVNGREGLS +ETL +
Sbjct: 79   QTKVWPEGSLEETVQNAIKSWEMEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRL 138

Query: 847  GSYNALLKTSLPEGFQYYKADEETYESSHDVFRTTFPRGFAWEVV 713
            GSYNALLK SLPE FQYYK +EE++ESSHD FR+  PRGFAWE++
Sbjct: 139  GSYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEIL 183



 Score =  146 bits (369), Expect(2) = 5e-92
 Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -2

Query: 648 SVYSGPPVIAFKFRHWGYMEGPFKGHAPTGEKVEFYGLAVMKVDESLRAEEVEIYYDPGE 469
           SVYSGPPVIAFKFRHWGY EG FKGHAPTGE V+F GL V+KVDESLRAEE+EIYYDPGE
Sbjct: 184 SVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLGVLKVDESLRAEEIEIYYDPGE 243

Query: 468 LFGGLLKGSPTSDSH-QDTSSNPSSKDGCPF 379
           LFGGLLKG P S++   D+  N + K  CPF
Sbjct: 244 LFGGLLKGPPISETKTTDSGDNTAEKQSCPF 274


>ref|NP_565189.1| pathogenesis-related protein [Arabidopsis thaliana]
            gi|21595167|gb|AAM66077.1| pathogenesis-related
            protein-like protein [Arabidopsis thaliana]
            gi|332198029|gb|AEE36150.1| pathogenesis-related protein
            [Arabidopsis thaliana]
          Length = 238

 Score =  214 bits (545), Expect(2) = 1e-90
 Identities = 97/140 (69%), Positives = 119/140 (85%)
 Frame = -1

Query: 1132 DKYRSYMSEDEVKNIEWRHGRPPIFDHVNELFEKERTKIWPEGSLEETVQNAIKTWEMEL 953
            DKYRS +  ++   ++WR+  PP F+ VN+LFE+ +TK+WPEGSLEETVQNAIK+WEME 
Sbjct: 8    DKYRSVL--EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEMEF 65

Query: 952  SHKTQIQDFKTINPEKFKLFVNGREGLSGQETLEMGSYNALLKTSLPEGFQYYKADEETY 773
            SHK ++QDFKTINPEKFKLFVNGREGLS +ETL +GSYNALLK SLPE FQYYK +EE++
Sbjct: 66   SHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEEESF 125

Query: 772  ESSHDVFRTTFPRGFAWEVV 713
            ESSHD FR+  PRGFAWE++
Sbjct: 126  ESSHDAFRSALPRGFAWEIL 145



 Score =  146 bits (369), Expect(2) = 1e-90
 Identities = 68/91 (74%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -2

Query: 648 SVYSGPPVIAFKFRHWGYMEGPFKGHAPTGEKVEFYGLAVMKVDESLRAEEVEIYYDPGE 469
           SVYSGPPVIAFKFRHWGY EG FKGHAPTGE V+F GL V+KVDESLRAEE+EIYYDPGE
Sbjct: 146 SVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLGVLKVDESLRAEEIEIYYDPGE 205

Query: 468 LFGGLLKGSPTSDSH-QDTSSNPSSKDGCPF 379
           LFGGLLKG P S++   D+  N + K  CPF
Sbjct: 206 LFGGLLKGPPISETKTTDSGDNTAEKQSCPF 236


>ref|XP_002331808.1| predicted protein [Populus trichocarpa] gi|222874504|gb|EEF11635.1|
            predicted protein [Populus trichocarpa]
          Length = 247

 Score =  219 bits (559), Expect(2) = 2e-90
 Identities = 99/140 (70%), Positives = 118/140 (84%)
 Frame = -1

Query: 1132 DKYRSYMSEDEVKNIEWRHGRPPIFDHVNELFEKERTKIWPEGSLEETVQNAIKTWEMEL 953
            DKYRS++ ED     +WRHG PP FD VN+LFE+ RTK WP+GSLEE VQNAIKTW+ME+
Sbjct: 14   DKYRSFLHEDTENTTQWRHGGPPNFDTVNQLFEEGRTKEWPKGSLEEVVQNAIKTWDMEI 73

Query: 952  SHKTQIQDFKTINPEKFKLFVNGREGLSGQETLEMGSYNALLKTSLPEGFQYYKADEETY 773
             HKT++QD KTINP+ FKL VNGREGL+ +ETL +GSYNALLK+SLP+ FQYYKADEET+
Sbjct: 74   EHKTRVQDIKTINPDTFKLIVNGREGLAAEETLRIGSYNALLKSSLPKEFQYYKADEETF 133

Query: 772  ESSHDVFRTTFPRGFAWEVV 713
            ESSHD FR+  PRGFAWEV+
Sbjct: 134  ESSHDAFRSALPRGFAWEVL 153



 Score =  140 bits (353), Expect(2) = 2e-90
 Identities = 65/94 (69%), Positives = 76/94 (80%), Gaps = 2/94 (2%)
 Frame = -2

Query: 648 SVYSGPPVIAFKFRHWGYMEGPFKGHAPTGEKVEFYGLAVMKVDESLRAEEVEIYYDPGE 469
           SVYSGPPVI+FKFRHWG+ EGPFKGHAPT EKVEFYG  ++KVDESLRAE+VE+YYDP E
Sbjct: 154 SVYSGPPVISFKFRHWGFFEGPFKGHAPTEEKVEFYGFGILKVDESLRAEDVEVYYDPAE 213

Query: 468 LFGGLLKGSPTS--DSHQDTSSNPSSKDGCPFYK 373
           LFGGLLKG+  S   S  +T +  ++  GCPF K
Sbjct: 214 LFGGLLKGALISPCQSEDNTVNTATATRGCPFSK 247


>ref|XP_002317453.1| predicted protein [Populus trichocarpa] gi|222860518|gb|EEE98065.1|
            predicted protein [Populus trichocarpa]
          Length = 267

 Score =  217 bits (552), Expect(2) = 5e-90
 Identities = 102/158 (64%), Positives = 122/158 (77%), Gaps = 18/158 (11%)
 Frame = -1

Query: 1132 DKYRSYMSEDEVKNIEWRHGRPPIFDHVNELFEKERTKI------------------WPE 1007
            D YRS + ++     +WRHG PP++D VN+LFE+ RTK+                  WP+
Sbjct: 14   DIYRSILHDEAENTTQWRHGGPPVYDSVNQLFEEGRTKVLDPFSSSPLCLYMSKLCEWPK 73

Query: 1006 GSLEETVQNAIKTWEMELSHKTQIQDFKTINPEKFKLFVNGREGLSGQETLEMGSYNALL 827
            GSLEE VQNAIK+WEMELSHKT++QDFKTINP+KFKL VNGREGLSG+ETL +GSYNALL
Sbjct: 74   GSLEEVVQNAIKSWEMELSHKTRLQDFKTINPDKFKLIVNGREGLSGEETLRLGSYNALL 133

Query: 826  KTSLPEGFQYYKADEETYESSHDVFRTTFPRGFAWEVV 713
            K SLP+ FQYYKADEET+ESSHD FR+ FPRGFAWEV+
Sbjct: 134  KNSLPKEFQYYKADEETFESSHDAFRSAFPRGFAWEVL 171



 Score =  142 bits (357), Expect(2) = 5e-90
 Identities = 67/96 (69%), Positives = 81/96 (84%), Gaps = 4/96 (4%)
 Frame = -2

Query: 648 SVYSGPPVIAFKFRHWGYMEGPFKGHAPTGEKVEFYGLAVMKVDESLRAEEVEIYYDPGE 469
           +VYSGPPVI+FKFRHWG+ EGPFKGHAPTGEKVEF+GL V+K+DES RAE+VEIYYDP E
Sbjct: 172 NVYSGPPVISFKFRHWGFFEGPFKGHAPTGEKVEFHGLGVLKIDESQRAEDVEIYYDPAE 231

Query: 468 LFGGLLKG---SPT-SDSHQDTSSNPSSKDGCPFYK 373
           LFGGLLKG   SP+ S+S  +T++  ++  GCPF K
Sbjct: 232 LFGGLLKGPLISPSQSESEDNTATVAAATHGCPFSK 267


>ref|XP_002889208.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297335049|gb|EFH65467.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 276

 Score =  216 bits (551), Expect(2) = 8e-90
 Identities = 103/165 (62%), Positives = 125/165 (75%), Gaps = 24/165 (14%)
 Frame = -1

Query: 1135 SDKYRSYMSEDEVKNIEWRHGRPPIFDHVNELFEKERT---------------------- 1022
            +DKYRS +++++  NI WR+G PPIFD VN+LFE+ERT                      
Sbjct: 19   ADKYRSILNDEKRGNIRWRYGGPPIFDTVNKLFEEERTQVQWRYGLPPDFNSVNQLFEEG 78

Query: 1021 --KIWPEGSLEETVQNAIKTWEMELSHKTQIQDFKTINPEKFKLFVNGREGLSGQETLEM 848
              K+WP+GSLEETVQNAIK+WEME SHK ++QDFKTINPEKFKLFVNGREGLS +ETL +
Sbjct: 79   QTKVWPQGSLEETVQNAIKSWEMEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRL 138

Query: 847  GSYNALLKTSLPEGFQYYKADEETYESSHDVFRTTFPRGFAWEVV 713
            GSYNALLK SLPE FQYYK +EE++ESSHD FR+  PRGFAWE++
Sbjct: 139  GSYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEIL 183



 Score =  141 bits (356), Expect(2) = 8e-90
 Identities = 66/91 (72%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
 Frame = -2

Query: 648 SVYSGPPVIAFKFRHWGYMEGPFKGHAPTGEKVEFYGLAVMKVDESLRAEEVEIYYDPGE 469
           SVYSGPPVIAFKFRHWGY EG FKGHAPTGE V+F GL V+KVDE+LRAEE+EIYYDPGE
Sbjct: 184 SVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFMGLGVLKVDETLRAEEIEIYYDPGE 243

Query: 468 LFGGLLKGSPTSDSH-QDTSSNPSSKDGCPF 379
           LFG LLKG P S++   D   N + K  CPF
Sbjct: 244 LFGELLKGRPISETKTTDRGDNTADKQSCPF 274


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