BLASTX nr result

ID: Coptis23_contig00015464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015464
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307088.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
emb|CAN82836.1| hypothetical protein VITISV_030871 [Vitis vinifera]   116   2e-24
ref|XP_002307384.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_002285798.1| PREDICTED: uncharacterized protein LOC100260...   111   5e-23
ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260...   111   5e-23

>ref|XP_002307088.1| predicted protein [Populus trichocarpa] gi|222856537|gb|EEE94084.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/62 (91%), Positives = 60/62 (96%)
 Frame = -2

Query: 232 ELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGVRKPPGGESSIA 53
           ELTGNDIFKGD PPGSAEKPLS AKL+E+SGSDIFADGKAA+RDYLGGVRKPPGGESSIA
Sbjct: 239 ELTGNDIFKGDVPPGSAEKPLSTAKLKEMSGSDIFADGKAASRDYLGGVRKPPGGESSIA 298

Query: 52  LV 47
           LV
Sbjct: 299 LV 300


>emb|CAN82836.1| hypothetical protein VITISV_030871 [Vitis vinifera]
          Length = 342

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -2

Query: 232 ELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGVRKPPGGESSIA 53
           ELTGNDIFKGD PPGSAEKPLS+AKL+E+SGSDIFADGKA +RDYLGGVRKPPGGESSIA
Sbjct: 281 ELTGNDIFKGDVPPGSAEKPLSMAKLKEMSGSDIFADGKAESRDYLGGVRKPPGGESSIA 340

Query: 52  LV 47
           L+
Sbjct: 341 LI 342


>ref|XP_002307384.1| predicted protein [Populus trichocarpa] gi|222856833|gb|EEE94380.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = -2

Query: 232 ELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGVRKPPGGESSIA 53
           EL+GNDIFKGDAPP SAEKPLSVAKLRE+SG+DIFADGK  +RD+LGGVRKPPGGESSIA
Sbjct: 233 ELSGNDIFKGDAPPSSAEKPLSVAKLREMSGNDIFADGKVESRDFLGGVRKPPGGESSIA 292

Query: 52  LV 47
           LV
Sbjct: 293 LV 294


>ref|XP_002285798.1| PREDICTED: uncharacterized protein LOC100260886 isoform 3 [Vitis
           vinifera]
          Length = 286

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 232 ELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGVRKPPGGESSIA 53
           ELTGNDIFKGD PP SAEK LS+AKLRE+SG+DIFADGKA +RDYLGGVRKPPGGESSIA
Sbjct: 225 ELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGESSIA 284

Query: 52  LV 47
           LV
Sbjct: 285 LV 286


>ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis
           vinifera]
          Length = 304

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 232 ELTGNDIFKGDAPPGSAEKPLSVAKLREISGSDIFADGKAANRDYLGGVRKPPGGESSIA 53
           ELTGNDIFKGD PP SAEK LS+AKLRE+SG+DIFADGKA +RDYLGGVRKPPGGESSIA
Sbjct: 243 ELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGESSIA 302

Query: 52  LV 47
           LV
Sbjct: 303 LV 304


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