BLASTX nr result

ID: Coptis23_contig00015462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015462
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|2...   151   1e-34
gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [...   144   1e-32
ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248...   144   1e-32
emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]   144   1e-32
ref|NP_001234125.1| ABA-induced MYB transcription factor [Solanu...   122   7e-26

>ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|222865100|gb|EEF02231.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  151 bits (381), Expect = 1e-34
 Identities = 96/203 (47%), Positives = 109/203 (53%), Gaps = 25/203 (12%)
 Frame = -2

Query: 647 GRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQ-----XXXXXXX 483
           GRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRL+ERIQ            
Sbjct: 110 GRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLIERIQAAAAATSSSTAT 169

Query: 482 XXXXXXXXXXXXXXNQEYTTVNPVLPAG------RSAHINSSLITPENSSTAASSD---- 333
                         N +  T N V+P G        +H+  S  TPENSSTAASSD    
Sbjct: 170 SASPAASTNHHLINNNDVGTGNLVMPHGVIGNDFGVSHVTPS-YTPENSSTAASSDSFAA 228

Query: 332 ----VSD-PKDYYTL----QDXXXXXXNSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMW 180
               VSD   DYY +                 Y +   + +GYFNQG      +H  N W
Sbjct: 229 QVSPVSDLTTDYYYIPVNHNPNPDYFQADQGGYSESMISPAGYFNQGLDFQAMEHNSNQW 288

Query: 179 -FGSEDTMENSWNVEDLWFLQQQ 114
              S DT +N WN ED+WFLQQQ
Sbjct: 289 LMESGDTSDNLWNPEDIWFLQQQ 311


>gb|ACQ42220.1| R2R3 transcription factor MYB108-like protein 1 [Vitis vinifera]
          Length = 306

 Score =  144 bits (364), Expect = 1e-32
 Identities = 88/201 (43%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
 Frame = -2

Query: 647 GRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXX 468
           GRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ            
Sbjct: 106 GRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATSGSSPA 165

Query: 467 XXXXXXXXXNQEYTTVNPVLPAGRSAHIN------SSLITPENSSTAASSD--------V 330
                    + +    +  +P   +   +      S+  TPENSSTAASSD        V
Sbjct: 166 AVAAHQFSGSCDIVAGSAAVPQMAAGGADFYGGQVSTGYTPENSSTAASSDSFGAQVSPV 225

Query: 329 SDPKDYYTL----QDXXXXXXNSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWF--GSE 168
           SD  + Y                 + Y D   + SGYFNQG    +       W+  G  
Sbjct: 226 SDLTEIYNFPVSDNQNPDFFQTDQVGYTDSLISPSGYFNQGLD-FQSMEPNTQWYEGGDT 284

Query: 167 DTMENSWNVEDLWFLQQQFCN 105
            T +N WNVED+W +Q QF N
Sbjct: 285 ATADNLWNVEDIWSVQTQFTN 305


>ref|XP_002280500.1| PREDICTED: uncharacterized protein LOC100248153 [Vitis vinifera]
           gi|296083206|emb|CBI22842.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  144 bits (364), Expect = 1e-32
 Identities = 88/201 (43%), Positives = 104/201 (51%), Gaps = 20/201 (9%)
 Frame = -2

Query: 647 GRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXX 468
           GRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ            
Sbjct: 106 GRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATSGSSPA 165

Query: 467 XXXXXXXXXNQEYTTVNPVLPAGRSAHIN------SSLITPENSSTAASSD--------V 330
                    + +    +  +P   +   +      S+  TPENSSTAASSD        V
Sbjct: 166 AVAAHQFSGSCDIVAGSAAVPQMAAGGADFYGGQVSTGYTPENSSTAASSDSFGAQVSPV 225

Query: 329 SDPKDYYTL----QDXXXXXXNSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWF--GSE 168
           SD  + Y                 + Y D   + SGYFNQG    +       W+  G  
Sbjct: 226 SDLTEIYNFPVSDNQNPDFFQTGQVGYTDSLISPSGYFNQGLD-FQSMEPNTQWYEGGDT 284

Query: 167 DTMENSWNVEDLWFLQQQFCN 105
            T +N WNVED+W +Q QF N
Sbjct: 285 ATADNLWNVEDIWSVQTQFTN 305


>emb|CAN63179.1| hypothetical protein VITISV_029107 [Vitis vinifera]
          Length = 306

 Score =  144 bits (364), Expect = 1e-32
 Identities = 89/201 (44%), Positives = 105/201 (52%), Gaps = 20/201 (9%)
 Frame = -2

Query: 647 GRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXX 468
           GRTDNEIKNYWRTRVQKHAKQL+CDVNSKQFKDTMRYLWMPRLVERIQ            
Sbjct: 106 GRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATSGSSPA 165

Query: 467 XXXXXXXXXNQEYTTVNPVLPAGRSAHIN------SSLITPENSSTAASSD--------V 330
                    + +    +  +P   +   +      S+  TPENSSTAASSD        V
Sbjct: 166 AVAAHQFXGSCDIVAGSAAVPQMAAGGADFYGGQVSTGYTPENSSTAASSDSFGAQVSPV 225

Query: 329 SDPKDYYTL----QDXXXXXXNSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWF--GSE 168
           SD  + Y                 + Y D   + SGYFNQG    +       W+  G  
Sbjct: 226 SDLTEIYNFPVSDNQNPDFFQTGQVGYTDSLISPSGYFNQGLD-FQSMEPNTQWYEGGDT 284

Query: 167 DTMENSWNVEDLWFLQQQFCN 105
            T +N WNVED+W +Q QF N
Sbjct: 285 ATADNLWNVEDIWSVQTQFTN 305


>ref|NP_001234125.1| ABA-induced MYB transcription factor [Solanum lycopersicum]
           gi|223006854|gb|ACM69370.1| ABA-induced MYB
           transcription factor [Solanum lycopersicum]
          Length = 243

 Score =  122 bits (305), Expect = 7e-26
 Identities = 71/176 (40%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
 Frame = -2

Query: 647 GRTDNEIKNYWRTRVQKHAKQLQCDVNSKQFKDTMRYLWMPRLVERIQXXXXXXXXXXXX 468
           GRTDNEIKNYWRTRVQKHAKQL+CDVNS+QF+DT+RYLW+PRLVERI+            
Sbjct: 104 GRTDNEIKNYWRTRVQKHAKQLKCDVNSRQFQDTLRYLWIPRLVERIE------------ 151

Query: 467 XXXXXXXXXNQEYTTVNPVLPAGRSAHIN---SSLITPENSSTAASSDVSDPKDYYTLQD 297
                       Y  +N    +    HIN   S+ +T ENS  A SS  S+       QD
Sbjct: 152 ------ASKISNYNCINEAQQSIMRTHINNNFSTSVTLENSRVATSSKNSN-------QD 198

Query: 296 XXXXXXNSHMNYPDFHTNQSGYFNQGSQGIEQQHEQNMWFGSEDTMENSWNVEDLW 129
                 +  + Y D+            Q ++QQ+   +W  +ED   N  N+ED+W
Sbjct: 199 YNQVNQSDQLWYEDY------------QAMDQQNNIELWMDNEDVFNNLCNIEDIW 242


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