BLASTX nr result

ID: Coptis23_contig00015457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015457
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306777.1| copalyl diphosphate synthase [Populus tricho...   150   3e-34
ref|XP_002302110.1| copalyl diphosphate synthase [Populus tricho...   149   6e-34
ref|XP_002272832.2| PREDICTED: ent-copalyl diphosphate synthase,...   139   6e-31
emb|CBI28693.3| unnamed protein product [Vitis vinifera]              139   6e-31
ref|XP_004170372.1| PREDICTED: LOW QUALITY PROTEIN: ent-copalyl ...   136   4e-30

>ref|XP_002306777.1| copalyl diphosphate synthase [Populus trichocarpa]
            gi|222856226|gb|EEE93773.1| copalyl diphosphate synthase
            [Populus trichocarpa]
          Length = 807

 Score =  150 bits (378), Expect = 3e-34
 Identities = 88/181 (48%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
 Frame = +2

Query: 26   TANRLVHILHRTLDNISVDALKTNGNDVHKALQKSFETWLLTWEEENDKPHQVIAEVLVS 205
            T   LV +L  TL+ +S+ AL  +G D+  +L+ ++E WLL WE E D+  Q  AE+LV 
Sbjct: 627  TRQELVKLLLGTLNQLSLGALVVHGRDISHSLRHAWEKWLLIWELEGDR-RQGEAELLVQ 685

Query: 206  IIISCGGHSQSEEILSH-PQYKHLVHLTNRVCYQFGGICKRKVETNG------ASTNGPA 364
             I    G+  SEE+L+H PQY+ LV LTNR+CYQ     K KV  NG      ++T+   
Sbjct: 686  TINLTAGYLVSEELLAHHPQYEQLVDLTNRICYQLDHYKKNKVHYNGSYSTITSNTDRIT 745

Query: 365  TLSIDSDMQELVQTVLQN-SDGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVLFKR 541
            T  I+SDMQELVQ V+QN SDGI S IKQTFL VAKS +Y+  C   T+++HI++VLF+R
Sbjct: 746  TPQIESDMQELVQLVVQNPSDGIDSNIKQTFLQVAKSFYYSAICDPGTINYHIAKVLFER 805

Query: 542  V 544
            V
Sbjct: 806  V 806


>ref|XP_002302110.1| copalyl diphosphate synthase [Populus trichocarpa]
            gi|222843836|gb|EEE81383.1| copalyl diphosphate synthase
            [Populus trichocarpa]
          Length = 795

 Score =  149 bits (375), Expect = 6e-34
 Identities = 85/184 (46%), Positives = 118/184 (64%), Gaps = 8/184 (4%)
 Frame = +2

Query: 17   SSNTANRLVHILHRTLDNISVDALKTNGNDVHKALQKSFETWLLTWEEENDKPHQVIAEV 196
            +  T   LV +L  TL+ +S  AL+ +G D+  +L+ ++E WL++WE E D+  +  AE+
Sbjct: 612  TKKTRKELVKMLLGTLNQLSFGALEVHGRDISHSLRHAWERWLISWELEGDR-RRGEAEL 670

Query: 197  LVSIIISCGGHSQSEEILS-HPQYKHLVHLTNRVCYQFGGICKRKVETNGA------STN 355
            LV  I    G+  SEE+L  HPQY+ L  LTNR+CYQ G   K KV  NG+      ST+
Sbjct: 671  LVQTIHLTAGYKVSEELLVYHPQYEQLADLTNRICYQLGHYQKNKVHDNGSYSTITGSTD 730

Query: 356  GPATLSIDSDMQELVQTVLQ-NSDGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVL 532
               T  I+SDMQEL+Q V+Q  SDGI  KIKQTFL VAKS +YT +C   T+++HI++VL
Sbjct: 731  RITTPQIESDMQELMQLVIQKTSDGIDPKIKQTFLQVAKSFYYTAFCDPGTINYHIAKVL 790

Query: 533  FKRV 544
            F+ V
Sbjct: 791  FETV 794


>ref|XP_002272832.2| PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like
            [Vitis vinifera]
          Length = 757

 Score =  139 bits (349), Expect = 6e-31
 Identities = 79/181 (43%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
 Frame = +2

Query: 14   SSSNTANRLVHILHRTLDNISVDALKTNGNDVHKALQKSFETWLLTWEEENDKPHQVIAE 193
            + S T   L  +L  TL+ +S+DA + +G+D+H+ L +++E WL     E D   Q  AE
Sbjct: 578  NGSKTGEELAGLLLTTLNQLSLDAQELHGSDIHQLLHRTWEMWLTKNLAEEDGC-QGEAE 636

Query: 194  VLVSIIISCGGHSQSEEILSHPQYKHLVHLTNRVCYQFGGICKRKVETNGASTNGPATLS 373
            VLV +I  C G S +EE+L+HP YKHL+HLTN V +Q     + K      +    + +S
Sbjct: 637  VLVDVINLCSGRSITEELLNHPLYKHLLHLTNGVSHQLSPFYQHKAHIGSYNPEKESDVS 696

Query: 374  --IDSDMQELVQTVLQNS-DGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVLFKRV 544
              ++ DMQEL Q VLQNS + I   IK+TFL VAKS +Y  YC   T+D HI++VLF+RV
Sbjct: 697  SKVEPDMQELAQLVLQNSTEDIDPVIKRTFLMVAKSFYYAAYCDPATIDSHIAKVLFERV 756

Query: 545  V 547
            V
Sbjct: 757  V 757


>emb|CBI28693.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  139 bits (349), Expect = 6e-31
 Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 5/186 (2%)
 Frame = +2

Query: 5    LNRSS--SNTANRLVHILHRTLDNISVDALKTNGNDVHKALQKSFETWLLTWEEENDKPH 178
            +N SS  S T   L  +L  TL+ +S+DA + +G+D+H+ L +++E WL     E D   
Sbjct: 600  INGSSNLSKTGEELAGLLLTTLNQLSLDAQELHGSDIHQLLHRTWEMWLTKNLAEEDGC- 658

Query: 179  QVIAEVLVSIIISCGGHSQSEEILSHPQYKHLVHLTNRVCYQFGGICKRKVETNGASTNG 358
            Q  AEVLV +I  C G S +EE+L+HP YKHL+HLTN V +Q     + K      +   
Sbjct: 659  QGEAEVLVDVINLCSGRSITEELLNHPLYKHLLHLTNGVSHQLSPFYQHKAHIGSYNPEK 718

Query: 359  PATLS--IDSDMQELVQTVLQNS-DGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEV 529
             + +S  ++ DMQEL Q VLQNS + I   IK+TFL VAKS +Y  YC   T+D HI++V
Sbjct: 719  ESDVSSKVEPDMQELAQLVLQNSTEDIDPVIKRTFLMVAKSFYYAAYCDPATIDSHIAKV 778

Query: 530  LFKRVV 547
            LF+RVV
Sbjct: 779  LFERVV 784


>ref|XP_004170372.1| PREDICTED: LOW QUALITY PROTEIN: ent-copalyl diphosphate synthase,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 819

 Score =  136 bits (342), Expect = 4e-30
 Identities = 78/176 (44%), Positives = 114/176 (64%), Gaps = 7/176 (3%)
 Frame = +2

Query: 38   LVHILHRTLDNISVDALKTNGNDVHKALQKSFETWLLTWEEENDKPHQVIAEVLVSIIIS 217
            LV IL RTL NIS+D L ++G D+   L ++++ WL  W+E+ D  H+  AE+LV  II 
Sbjct: 644  LVGILLRTLTNISLDILVSHGLDITHHLHQAWKKWLFKWQEDGDV-HKEEAELLVQTIIL 702

Query: 218  CGGHSQSEEILSHPQYKHLVHLTNRVCYQFGGICKRKVETNG---ASTNGPATLSIDSDM 388
              G S  E++LS+PQY+ L +LTN+VC+Q G   K KV   G     T+      I+ DM
Sbjct: 703  NSGCSTLEDLLSNPQYQKLSYLTNKVCHQLGHFKKHKVTNGGIYKEKTDNKMPQEIEDDM 762

Query: 389  QELVQTVLQN----SDGISSKIKQTFLTVAKSCFYTVYCPQETMDHHISEVLFKRV 544
            ++L+Q V+QN    +D I+S+IK TFLTVAKS +Y  Y    T+++HI++VLF++V
Sbjct: 763  RKLMQLVIQNPSDSNDIINSQIKHTFLTVAKSLYYAAYFDPWTINYHIAKVLFEKV 818


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