BLASTX nr result

ID: Coptis23_contig00015451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015451
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36190.1| unknown [Medicago truncatula]                           55   8e-06
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...    55   8e-06
ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550...    54   1e-05

>gb|AFK36190.1| unknown [Medicago truncatula]
          Length = 98

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/82 (42%), Positives = 41/82 (50%)
 Frame = +3

Query: 3   KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182
           KDYGV+ESW KL TI                 SENGEVLL   +     L+LYDP+    
Sbjct: 16  KDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLLMFEFD----LILYDPRDHSF 71

Query: 183 NNLEVHGITKWYGAEVYVGSLV 248
               + G   W+ AEVYV SLV
Sbjct: 72  RYPRIEGGKGWFDAEVYVESLV 93


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 366

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/82 (42%), Positives = 41/82 (50%)
 Frame = +3

Query: 3   KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182
           KDYGV+ESW KL TI                 SENGEVLL   +     L+LYDP+    
Sbjct: 284 KDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLLMFEFD----LILYDPRDHSF 339

Query: 183 NNLEVHGITKWYGAEVYVGSLV 248
               + G   W+ AEVYV SLV
Sbjct: 340 RYPRIEGGKGWFDAEVYVESLV 361


>ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1|
           F-box protein [Medicago truncatula]
          Length = 381

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 34/82 (41%), Positives = 50/82 (60%)
 Frame = +3

Query: 3   KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182
           K+YG ++SW KLFT+++S   + L  LRLL +S +G ++L  +  E  KL  YD K E+ 
Sbjct: 277 KEYGCRDSWCKLFTLAESCFTLPLKALRLLAYSSDGGMVLLQVDPE--KLFWYDLKSEQV 334

Query: 183 NNLEVHGITKWYGAEVYVGSLV 248
           +   V GI  +  A + VGSLV
Sbjct: 335 SC--VQGIPNFDQAMICVGSLV 354


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