BLASTX nr result
ID: Coptis23_contig00015451
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015451 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK36190.1| unknown [Medicago truncatula] 55 8e-06 ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat... 55 8e-06 ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|35550... 54 1e-05 >gb|AFK36190.1| unknown [Medicago truncatula] Length = 98 Score = 54.7 bits (130), Expect = 8e-06 Identities = 35/82 (42%), Positives = 41/82 (50%) Frame = +3 Query: 3 KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182 KDYGV+ESW KL TI SENGEVLL + L+LYDP+ Sbjct: 16 KDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLLMFEFD----LILYDPRDHSF 71 Query: 183 NNLEVHGITKWYGAEVYVGSLV 248 + G W+ AEVYV SLV Sbjct: 72 RYPRIEGGKGWFDAEVYVESLV 93 >ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 366 Score = 54.7 bits (130), Expect = 8e-06 Identities = 35/82 (42%), Positives = 41/82 (50%) Frame = +3 Query: 3 KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182 KDYGV+ESW KL TI SENGEVLL + L+LYDP+ Sbjct: 284 KDYGVRESWIKLLTIPYLPNPEDFSYSGPYCISENGEVLLMFEFD----LILYDPRDHSF 339 Query: 183 NNLEVHGITKWYGAEVYVGSLV 248 + G W+ AEVYV SLV Sbjct: 340 RYPRIEGGKGWFDAEVYVESLV 361 >ref|XP_003637494.1| F-box protein [Medicago truncatula] gi|355503429|gb|AES84632.1| F-box protein [Medicago truncatula] Length = 381 Score = 54.3 bits (129), Expect = 1e-05 Identities = 34/82 (41%), Positives = 50/82 (60%) Frame = +3 Query: 3 KDYGVKESWSKLFTISQSSVGISLGRLRLLRFSENGEVLLETIYSEEPKLVLYDPKLEKA 182 K+YG ++SW KLFT+++S + L LRLL +S +G ++L + E KL YD K E+ Sbjct: 277 KEYGCRDSWCKLFTLAESCFTLPLKALRLLAYSSDGGMVLLQVDPE--KLFWYDLKSEQV 334 Query: 183 NNLEVHGITKWYGAEVYVGSLV 248 + V GI + A + VGSLV Sbjct: 335 SC--VQGIPNFDQAMICVGSLV 354