BLASTX nr result

ID: Coptis23_contig00015446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015446
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein ...   272   9e-71
emb|CBI27694.3| unnamed protein product [Vitis vinifera]              272   9e-71
emb|CAN76690.1| hypothetical protein VITISV_001363 [Vitis vinifera]   269   7e-70
ref|XP_004156795.1| PREDICTED: tetratricopeptide repeat protein ...   265   1e-68
ref|XP_004151922.1| PREDICTED: tetratricopeptide repeat protein ...   265   1e-68

>ref|XP_002268108.2| PREDICTED: tetratricopeptide repeat protein 27 homolog [Vitis
            vinifera]
          Length = 909

 Score =  272 bits (696), Expect = 9e-71
 Identities = 166/341 (48%), Positives = 209/341 (61%), Gaps = 14/341 (4%)
 Frame = +3

Query: 66   FELRLLRCTLXXXXXXXXXXXXXHLIDNLLTSI-------ENGNYQEALNSEAAHLFFDF 224
            +ELRLLRCT              H    LLT+I       E G Y E L+S+A    F  
Sbjct: 14   YELRLLRCTTATQQQQPPPPQS-HAATPLLTTIIDTLDLIEAGRYAEVLSSDATRNVFRL 72

Query: 225  AHSYDYQ---NTILSADQFYSQVEYHVQKFLHDNN-NYQERVF---ILLCIAVAAFLAFT 383
               +  Q   +++  AD+FYS++   V  FL D + N  ER F   +++C+AV+AFL FT
Sbjct: 73   KDEFFSQFSDDSVDCADRFYSELMNRVDSFLVDESVNEVERGFRTVLVMCVAVSAFLGFT 132

Query: 384  QNNITGPCADKLSLFPFPQNNDNCNEIGVEWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 563
            Q N+TGP  D L L P   N         EW+ WAR QIMS+GSDL GK   LQYIVFAK
Sbjct: 133  QCNLTGPL-DGLPLSPLHANAFK------EWENWARIQIMSSGSDLFGKTYNLQYIVFAK 185

Query: 564  MLLSKIKDVLWEEEKGTSFTGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 743
            MLL + KD+L+E    TS  G+++ISWWL RVI  QQR+LD+ +SSLFD LQV   E   
Sbjct: 186  MLLMRTKDLLFEGSF-TSINGVRSISWWLARVILFQQRVLDERSSSLFDLLQVFMGETFH 244

Query: 744  HFGKVDNVETYWGTLLDEGEASTIVAMAHLEAGIVEYAYARVDQAEQHFDIAEEASALQL 923
            HFG  + V  YWG  L E E S+IV+M HLEAGI+EY Y RVD +  +F+ AE AS LQL
Sbjct: 245  HFGASEKVSNYWGAELHEEELSSIVSMLHLEAGILEYTYGRVDSSRLNFESAEVASGLQL 304

Query: 924  SVTGILGFRTVGQVDARAQKVLVANTIIPSIGGLCPTRSAE 1046
            S+TG+LGFRTV QV+ +AQ VLVANT + + G  CP+ S E
Sbjct: 305  SLTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCPSTSPE 345


>emb|CBI27694.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  272 bits (696), Expect = 9e-71
 Identities = 166/341 (48%), Positives = 209/341 (61%), Gaps = 14/341 (4%)
 Frame = +3

Query: 66   FELRLLRCTLXXXXXXXXXXXXXHLIDNLLTSI-------ENGNYQEALNSEAAHLFFDF 224
            +ELRLLRCT              H    LLT+I       E G Y E L+S+A    F  
Sbjct: 14   YELRLLRCTTATQQQQPPPPQS-HAATPLLTTIIDTLDLIEAGRYAEVLSSDATRNVFRL 72

Query: 225  AHSYDYQ---NTILSADQFYSQVEYHVQKFLHDNN-NYQERVF---ILLCIAVAAFLAFT 383
               +  Q   +++  AD+FYS++   V  FL D + N  ER F   +++C+AV+AFL FT
Sbjct: 73   KDEFFSQFSDDSVDCADRFYSELMNRVDSFLVDESVNEVERGFRTVLVMCVAVSAFLGFT 132

Query: 384  QNNITGPCADKLSLFPFPQNNDNCNEIGVEWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 563
            Q N+TGP  D L L P   N         EW+ WAR QIMS+GSDL GK   LQYIVFAK
Sbjct: 133  QCNLTGPL-DGLPLSPLHANAFK------EWENWARIQIMSSGSDLFGKTYNLQYIVFAK 185

Query: 564  MLLSKIKDVLWEEEKGTSFTGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 743
            MLL + KD+L+E    TS  G+++ISWWL RVI  QQR+LD+ +SSLFD LQV   E   
Sbjct: 186  MLLMRTKDLLFEGSF-TSINGVRSISWWLARVILFQQRVLDERSSSLFDLLQVFMGETFH 244

Query: 744  HFGKVDNVETYWGTLLDEGEASTIVAMAHLEAGIVEYAYARVDQAEQHFDIAEEASALQL 923
            HFG  + V  YWG  L E E S+IV+M HLEAGI+EY Y RVD +  +F+ AE AS LQL
Sbjct: 245  HFGASEKVSNYWGAELHEEELSSIVSMLHLEAGILEYTYGRVDSSRLNFESAEVASGLQL 304

Query: 924  SVTGILGFRTVGQVDARAQKVLVANTIIPSIGGLCPTRSAE 1046
            S+TG+LGFRTV QV+ +AQ VLVANT + + G  CP+ S E
Sbjct: 305  SLTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCPSTSPE 345


>emb|CAN76690.1| hypothetical protein VITISV_001363 [Vitis vinifera]
          Length = 438

 Score =  269 bits (688), Expect = 7e-70
 Identities = 164/341 (48%), Positives = 208/341 (60%), Gaps = 14/341 (4%)
 Frame = +3

Query: 66   FELRLLRCTLXXXXXXXXXXXXXHLIDNLLTSI-------ENGNYQEALNSEAAHLFFDF 224
            +ELRLLRCT              H    LLT+I       E G Y E L+S+A    F  
Sbjct: 14   YELRLLRCTTATQQQQPPPPQS-HAATPLLTTIIDTLDLIEAGRYAEVLSSDATRNVFRL 72

Query: 225  AHSYDYQ---NTILSADQFYSQVEYHVQKFL-HDNNNYQERVF---ILLCIAVAAFLAFT 383
               +  Q   +++  AD+FYS++   V  FL  ++ N  ER F   +++C+AV+AFL FT
Sbjct: 73   KDEFFSQFSDDSVDCADRFYSELMNXVDSFLVXESVNEXERGFRTVLVMCVAVSAFLGFT 132

Query: 384  QNNITGPCADKLSLFPFPQNNDNCNEIGVEWDGWARNQIMSTGSDLCGKFSLLQYIVFAK 563
            Q N+TGP  D L L P   N         EW+ WAR Q+MS+GSDL GK   LQYIVFAK
Sbjct: 133  QCNLTGPL-DGLPLSPLHANAFK------EWENWARIQJMSSGSDLFGKTYNLQYIVFAK 185

Query: 564  MLLSKIKDVLWEEEKGTSFTGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLK 743
            MLL + KD+L+E    TS  G+++ISWWL RVI  QQR+LD+ +SSLFD LQV   E   
Sbjct: 186  MLLMRTKDLLFEGSF-TSXNGVRSISWWLARVILFQQRVLDERSSSLFDLLQVFMGETFH 244

Query: 744  HFGKVDNVETYWGTLLDEGEASTIVAMAHLEAGIVEYAYARVDQAEQHFDIAEEASALQL 923
            HFG  + V  YWG  L E E S+IV+M HLEAGI+EY Y RVD +  +F+ AE AS LQL
Sbjct: 245  HFGXXEKVSNYWGAELHEEELSSIVSMLHLEAGILEYTYGRVDSSRLNFESAEVASGLQL 304

Query: 924  SVTGILGFRTVGQVDARAQKVLVANTIIPSIGGLCPTRSAE 1046
            S TG+LGFRTV QV+ +AQ VLVANT + + G  CP+ S E
Sbjct: 305  SXTGVLGFRTVHQVEPKAQLVLVANTSMLNSGDTCPSTSPE 345


>ref|XP_004156795.1| PREDICTED: tetratricopeptide repeat protein 27-like [Cucumis
           sativus]
          Length = 416

 Score =  265 bits (678), Expect = 1e-68
 Identities = 156/324 (48%), Positives = 206/324 (63%), Gaps = 14/324 (4%)
 Frame = +3

Query: 69  ELRLLRCTLXXXXXXXXXXXXXHL--------IDNLLTSIENGNYQEALNSEAAHLFFDF 224
           ELRLL CT                        +D L+ SI  G+YQ+AL S AA L    
Sbjct: 13  ELRLLYCTFSSLPSDCPADSQTQTSRNRLHESLDILVNSILAGDYQKALASNAAQLVLGL 72

Query: 225 AHSYDYQNTILS--ADQFYSQVEYHVQKFLHDNNNYQE----RVFILLCIAVAAFLAFTQ 386
            +    Q T  +  A+Q Y+++    +KF+      +E    R+ I++CIA+A+FL FTQ
Sbjct: 73  VNMSPCQFTDSTECAEQVYAELLECAEKFVISKFENEEDRLCRLMIVVCIAIASFLTFTQ 132

Query: 387 NNITGPCADKLSLFPFPQNNDNCNEIGVEWDGWARNQIMSTGSDLCGKFSLLQYIVFAKM 566
           +N++GP  + L+  P            VEWD WAR+Q+M TGSDL GKF+ +QYIVFAKM
Sbjct: 133 SNVSGPL-EGLARSPMAVIELKVEGF-VEWDNWARHQLMFTGSDLFGKFTNIQYIVFAKM 190

Query: 567 LLSKIKDVLWEEEKGTSFTGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLKH 746
           LL++IKD+L++E   + + G+K+ISWWL RV+  QQRILD+ +SSLFD LQVL  E L  
Sbjct: 191 LLTRIKDMLFKENTSSKY-GMKSISWWLARVLLCQQRILDERSSSLFDHLQVLMGEALVD 249

Query: 747 FGKVDNVETYWGTLLDEGEASTIVAMAHLEAGIVEYAYARVDQAEQHFDIAEEASALQLS 926
           FG  +NV++YWG  L EGEASTIV+M HLEAGI+EY Y RVD   QHF+ AE  S L+LS
Sbjct: 250 FGIQENVKSYWGANLQEGEASTIVSMIHLEAGIMEYYYGRVDSCRQHFESAEVESGLELS 309

Query: 927 VTGILGFRTVGQVDARAQKVLVAN 998
           +TG+LGFRT  QV+ +AQ VLVAN
Sbjct: 310 ITGVLGFRTSYQVEPKAQLVLVAN 333


>ref|XP_004151922.1| PREDICTED: tetratricopeptide repeat protein 27 homolog [Cucumis
           sativus]
          Length = 897

 Score =  265 bits (678), Expect = 1e-68
 Identities = 156/324 (48%), Positives = 206/324 (63%), Gaps = 14/324 (4%)
 Frame = +3

Query: 69  ELRLLRCTLXXXXXXXXXXXXXHL--------IDNLLTSIENGNYQEALNSEAAHLFFDF 224
           ELRLL CT                        +D L+ SI  G+YQ+AL S AA L    
Sbjct: 13  ELRLLYCTFSSLPSDCPADSQTQTSRNRLHESLDILVNSILAGDYQKALASNAAQLVLGL 72

Query: 225 AHSYDYQNTILS--ADQFYSQVEYHVQKFLHDNNNYQE----RVFILLCIAVAAFLAFTQ 386
            +    Q T  +  A+Q Y+++    +KF+      +E    R+ I++CIA+A+FL FTQ
Sbjct: 73  VNMSPCQFTDSTECAEQVYAELLECAEKFVISKFENEEDRLCRLMIVVCIAIASFLTFTQ 132

Query: 387 NNITGPCADKLSLFPFPQNNDNCNEIGVEWDGWARNQIMSTGSDLCGKFSLLQYIVFAKM 566
           +N++GP  + L+  P            VEWD WAR+Q+M TGSDL GKF+ +QYIVFAKM
Sbjct: 133 SNVSGPL-EGLARSPMAVIELKVEGF-VEWDNWARHQLMFTGSDLFGKFTNIQYIVFAKM 190

Query: 567 LLSKIKDVLWEEEKGTSFTGIKTISWWLGRVIFIQQRILDDTTSSLFDSLQVLNAEMLKH 746
           LL++IKD+L++E   + + G+K+ISWWL RV+  QQRILD+ +SSLFD LQVL  E L  
Sbjct: 191 LLTRIKDMLFKENTSSKY-GMKSISWWLARVLLCQQRILDERSSSLFDHLQVLMGEALVD 249

Query: 747 FGKVDNVETYWGTLLDEGEASTIVAMAHLEAGIVEYAYARVDQAEQHFDIAEEASALQLS 926
           FG  +NV++YWG  L EGEASTIV+M HLEAGI+EY Y RVD   QHF+ AE  S L+LS
Sbjct: 250 FGIQENVKSYWGANLQEGEASTIVSMIHLEAGIMEYYYGRVDSCRQHFESAEVESGLELS 309

Query: 927 VTGILGFRTVGQVDARAQKVLVAN 998
           +TG+LGFRT  QV+ +AQ VLVAN
Sbjct: 310 ITGVLGFRTSYQVEPKAQLVLVAN 333


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