BLASTX nr result
ID: Coptis23_contig00015445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015445
(1143 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ... 228 e-106
ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arab... 223 1e-98
ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2... 220 3e-97
ref|NP_001154461.2| putative U-box domain-containing protein 42 ... 220 7e-97
ref|NP_001154460.1| putative U-box domain-containing protein 42 ... 220 7e-97
>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
vinifera]
Length = 1055
Score = 228 bits (581), Expect(2) = e-106
Identities = 116/199 (58%), Positives = 154/199 (77%)
Frame = +2
Query: 542 HLINNFLCLLXXXXXXXXXXXXXXXXXXXYTLIGLINSPHEELRTAATKLLISLTPYMGH 721
+LI LCL YTLI LIN+PHEEL A+ KLLI+L+PY+GH
Sbjct: 670 NLIRILLCLAKSPKSNATIVSVVRETEASYTLIELINNPHEELGIASMKLLITLSPYLGH 729
Query: 722 SIADRLCKIKGQPESLIKSPRETYQITENHAVSANFLAKLPAQNLILNLALLHKETVPTV 901
+ A+RLCK +GQP+SL++SP T QIT+ AVSANFLA LP QNL LNLALL ++VP +
Sbjct: 730 TFAERLCKTRGQPQSLLQSPGGTNQITQKQAVSANFLADLPHQNLRLNLALLSNDSVPMI 789
Query: 902 IQTINEIQRSGTRTSRFASSYLEGLVGILVRFTTTIYEPEILRLARDHHLTVVFTELLMR 1081
+Q+I+++QRSGTRTSR+AS+YLEGLVGI+VRFTTT++EP++L LAR+++ T V TELL +
Sbjct: 790 LQSIHQMQRSGTRTSRYASAYLEGLVGIIVRFTTTLFEPQMLFLARNYNFTSVLTELLTK 849
Query: 1082 TASDEVQKLSAVGLENLSA 1138
T+SD+VQ+LSA+GL+NLS+
Sbjct: 850 TSSDKVQRLSAIGLKNLSS 868
Score = 185 bits (469), Expect(2) = e-106
Identities = 91/143 (63%), Positives = 113/143 (79%), Gaps = 1/143 (0%)
Frame = +3
Query: 111 GSEEMQMEMGSYLGEIVLGHDTNTYVAERASPTLMKLLQTGNTSARKAAFKALVQISSYH 290
G EEM+MEMGSYLGEI LGHD+ TYVAERASP L+K+L TGNT +KAAFKAL QISSYH
Sbjct: 525 GCEEMKMEMGSYLGEIALGHDSKTYVAERASPALVKMLHTGNTLTKKAAFKALEQISSYH 584
Query: 291 QNNRTIVEAGIVPILIQELFVSR-VHNELMNSTEESTEILANILESGITLDNLEVTTHGH 467
N + +VEAGIV I+++E+ R +HNE MNS +E+ IL N+LESGI +NL+V THGH
Sbjct: 585 PNGKILVEAGIVQIVVEEMLTPRKIHNETMNSIKEAAAILGNLLESGIEFENLQVNTHGH 644
Query: 468 TVGSKYIGYNLIEMLKHSNSETL 536
T+GS YI Y++I MLK+S + L
Sbjct: 645 TMGSDYIVYSIIHMLKNSTPDKL 667
>ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arabidopsis lyrata subsp.
lyrata] gi|297334534|gb|EFH64952.1| hypothetical protein
ARALYDRAFT_339138 [Arabidopsis lyrata subsp. lyrata]
Length = 1032
Score = 223 bits (568), Expect(2) = 1e-98
Identities = 110/170 (64%), Positives = 141/170 (82%)
Frame = +2
Query: 629 YTLIGLINSPHEELRTAATKLLISLTPYMGHSIADRLCKIKGQPESLIKSPRETYQITEN 808
+ +I LIN+PHEEL A KLLI+LTPY+GH++++RLCK +GQPE+LI+ P E QITE
Sbjct: 677 FAMIELINNPHEELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEK 736
Query: 809 HAVSANFLAKLPAQNLILNLALLHKETVPTVIQTINEIQRSGTRTSRFASSYLEGLVGIL 988
HAVSA LAKLP QNL LNLAL+++ V ++ I+ IQRSGTRTSR+A+ +LEGLVGIL
Sbjct: 737 HAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGTRTSRYATDFLEGLVGIL 796
Query: 989 VRFTTTIYEPEILRLARDHHLTVVFTELLMRTASDEVQKLSAVGLENLSA 1138
VRFTTT+YEP+++ LAR+H LT VF +LLM+T+SDEVQ+LSA GLENLS+
Sbjct: 797 VRFTTTLYEPQMMYLARNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSS 846
Score = 164 bits (416), Expect(2) = 1e-98
Identities = 83/161 (51%), Positives = 111/161 (68%)
Frame = +3
Query: 102 LQTGSEEMQMEMGSYLGEIVLGHDTNTYVAERASPTLMKLLQTGNTSARKAAFKALVQIS 281
L GSEE Q+ M +YL EI +GH+ TYVAE+A P L+ L+Q+ NT AR+AAFKAL IS
Sbjct: 501 LAEGSEETQVAMAAYLVEIDIGHEKKTYVAEKACPALIGLVQSENTDARRAAFKALAHIS 560
Query: 282 SYHQNNRTIVEAGIVPILIQELFVSRVHNELMNSTEESTEILANILESGITLDNLEVTTH 461
YH NN+ +VE GI+ I+++E+F RV ++LMNS E+ ILANILESG+ + EV TH
Sbjct: 561 LYHPNNQILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTH 620
Query: 462 GHTVGSKYIGYNLIEMLKHSNSETLQFTSSIISYAY*NRPR 584
GHT+GS Y YN+I+MLK+S+ + L I + PR
Sbjct: 621 GHTLGSDYFVYNIIQMLKNSSPDDLNINLIRILLSLSKSPR 661
>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 220 bits (560), Expect(2) = 3e-97
Identities = 117/199 (58%), Positives = 141/199 (70%)
Frame = +2
Query: 539 IHLINNFLCLLXXXXXXXXXXXXXXXXXXXYTLIGLINSPHEELRTAATKLLISLTPYMG 718
I+LI LCL YTL+ L+N+PHEEL AA KLLI L PYMG
Sbjct: 562 INLIRILLCLAKSPRSMSTIVSMVKESEASYTLVELLNNPHEELGIAAIKLLIVLIPYMG 621
Query: 719 HSIADRLCKIKGQPESLIKSPRETYQITENHAVSANFLAKLPAQNLILNLALLHKETVPT 898
H I +RLCK GQPE+LI ET +IT+ AVS+ FLAKLP Q+L LNLALL K TVP
Sbjct: 622 HIIVERLCKTAGQPENLILGRNETTRITQKQAVSSTFLAKLPHQSLTLNLALLRKNTVPA 681
Query: 899 VIQTINEIQRSGTRTSRFASSYLEGLVGILVRFTTTIYEPEILRLARDHHLTVVFTELLM 1078
++Q IN+IQ + RT R+ YLEGLV ILVRFTTT+YEP++L LARD++ T VFTELLM
Sbjct: 682 ILQQINQIQGTCIRTGRYVIPYLEGLVSILVRFTTTLYEPQMLFLARDYNFTSVFTELLM 741
Query: 1079 RTASDEVQKLSAVGLENLS 1135
+T+SDEVQ+LSA+GLENLS
Sbjct: 742 KTSSDEVQRLSAIGLENLS 760
Score = 162 bits (411), Expect(2) = 3e-97
Identities = 86/177 (48%), Positives = 119/177 (67%)
Frame = +3
Query: 6 ILKNLAYAFIIAYKTTLHKVIEVLLLLKRFF*LQTGSEEMQMEMGSYLGEIVLGHDTNTY 185
ILKNL + + K+ E LL L GSEEMQ EM YLGEI LG+D +TY
Sbjct: 389 ILKNLESS-----PENIKKMAENGLLEPLLKHLTEGSEEMQTEMAEYLGEISLGNDRDTY 443
Query: 186 VAERASPTLMKLLQTGNTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFVSRVH 365
VAERASP L+K++ GNT R AAFKAL +I+S H N + + ++GI+ I+++E+F R++
Sbjct: 444 VAERASPPLIKMVHGGNTLTRTAAFKALAKIASCHPNAKILAKSGIIQIMVEEMFTRRIY 503
Query: 366 NELMNSTEESTEILANILESGITLDNLEVTTHGHTVGSKYIGYNLIEMLKHSNSETL 536
E +NS E+ +LANILE+G+ L+NL+V +HGH + S Y+ YN IEM+KHS + L
Sbjct: 504 GEPINSKSEAAAMLANILEAGLDLENLQVNSHGHRLASDYVLYNFIEMIKHSTPDDL 560
>ref|NP_001154461.2| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
gi|332196746|gb|AEE34867.1| putative U-box
domain-containing protein 42 [Arabidopsis thaliana]
Length = 1061
Score = 220 bits (560), Expect(2) = 7e-97
Identities = 108/170 (63%), Positives = 140/170 (82%)
Frame = +2
Query: 629 YTLIGLINSPHEELRTAATKLLISLTPYMGHSIADRLCKIKGQPESLIKSPRETYQITEN 808
+ +I LIN+PH+EL A KLLI+LTPY+GH++++RLCK +GQPE+LI+ P E QITE
Sbjct: 678 FAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEK 737
Query: 809 HAVSANFLAKLPAQNLILNLALLHKETVPTVIQTINEIQRSGTRTSRFASSYLEGLVGIL 988
HAVSA LAKLP QNL LNLAL+++ V ++ I+ IQRSG RTSR+A+ +LEGLVGIL
Sbjct: 738 HAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGIL 797
Query: 989 VRFTTTIYEPEILRLARDHHLTVVFTELLMRTASDEVQKLSAVGLENLSA 1138
VRFTTT+YEP+++ LAR+H LT VF +LLM+T+SDEVQ+LSA GLENLS+
Sbjct: 798 VRFTTTLYEPQMMYLARNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSS 847
Score = 161 bits (408), Expect(2) = 7e-97
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = +3
Query: 102 LQTGSEEMQMEMGSYLGEIVLGHDTNTYVAERASPTLMKLLQTGNTSARKAAFKALVQIS 281
L GSEE Q+ M +YL EI +GH+ TYVAE+A P L+ L+Q+ N AR+AAFKAL IS
Sbjct: 502 LAEGSEETQVAMAAYLVEIDIGHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHIS 561
Query: 282 SYHQNNRTIVEAGIVPILIQELFVSRVHNELMNSTEESTEILANILESGITLDNLEVTTH 461
YH NN+ +VE GI+ I+++E+F RV ++LMNS E+ ILANILESG+ + EV TH
Sbjct: 562 LYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTH 621
Query: 462 GHTVGSKYIGYNLIEMLKHSNSETL 536
GHT+GS Y YN+I MLK+S+ + L
Sbjct: 622 GHTLGSDYFVYNIIHMLKNSSPDDL 646
>ref|NP_001154460.1| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
gi|332196745|gb|AEE34866.1| putative U-box
domain-containing protein 42 [Arabidopsis thaliana]
Length = 1035
Score = 220 bits (560), Expect(2) = 7e-97
Identities = 108/170 (63%), Positives = 140/170 (82%)
Frame = +2
Query: 629 YTLIGLINSPHEELRTAATKLLISLTPYMGHSIADRLCKIKGQPESLIKSPRETYQITEN 808
+ +I LIN+PH+EL A KLLI+LTPY+GH++++RLCK +GQPE+LI+ P E QITE
Sbjct: 678 FAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPVEANQITEK 737
Query: 809 HAVSANFLAKLPAQNLILNLALLHKETVPTVIQTINEIQRSGTRTSRFASSYLEGLVGIL 988
HAVSA LAKLP QNL LNLAL+++ V ++ I+ IQRSG RTSR+A+ +LEGLVGIL
Sbjct: 738 HAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDFLEGLVGIL 797
Query: 989 VRFTTTIYEPEILRLARDHHLTVVFTELLMRTASDEVQKLSAVGLENLSA 1138
VRFTTT+YEP+++ LAR+H LT VF +LLM+T+SDEVQ+LSA GLENLS+
Sbjct: 798 VRFTTTLYEPQMMYLARNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSS 847
Score = 161 bits (408), Expect(2) = 7e-97
Identities = 79/145 (54%), Positives = 105/145 (72%)
Frame = +3
Query: 102 LQTGSEEMQMEMGSYLGEIVLGHDTNTYVAERASPTLMKLLQTGNTSARKAAFKALVQIS 281
L GSEE Q+ M +YL EI +GH+ TYVAE+A P L+ L+Q+ N AR+AAFKAL IS
Sbjct: 502 LAEGSEETQVAMAAYLVEIDIGHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHIS 561
Query: 282 SYHQNNRTIVEAGIVPILIQELFVSRVHNELMNSTEESTEILANILESGITLDNLEVTTH 461
YH NN+ +VE GI+ I+++E+F RV ++LMNS E+ ILANILESG+ + EV TH
Sbjct: 562 LYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTH 621
Query: 462 GHTVGSKYIGYNLIEMLKHSNSETL 536
GHT+GS Y YN+I MLK+S+ + L
Sbjct: 622 GHTLGSDYFVYNIIHMLKNSSPDDL 646