BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015424
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|2...   251   4e-64
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]   243   1e-61
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor...   239   2e-60
emb|CBI26097.3| unnamed protein product [Vitis vinifera]              238   2e-60
ref|NP_850310.1| RING/U-box domain-containing protein [Arabidops...   231   4e-58

>ref|XP_002330333.1| predicted protein [Populus trichocarpa] gi|222871537|gb|EEF08668.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  251 bits (640), Expect = 4e-64
 Identities = 134/288 (46%), Positives = 193/288 (67%), Gaps = 9/288 (3%)
 Frame = -1

Query: 1445 KKRVETKKMS--ISMKIRNKSWCPICLEHIND----RKAAVLSICMHVYCINCIKKWTNL 1284
            K++ + K +S  I   IR +S CP+CL+        R+ AV+ +C+H YC++CI+KW+++
Sbjct: 13   KRQSQEKFLSKVILPAIRGQS-CPVCLKDFGGEEDYRRVAVIRVCLHAYCLDCIRKWSDI 71

Query: 1283 EKRNCPLCNSKFDSWFIKSRYSSRQFEEERLPILNEKKR-NGLEVETSETRRFSHQRSVR 1107
             KR CPLCNS+F+SWF +   S+R F  E+LP++ E +R   L++ +S            
Sbjct: 72   -KRKCPLCNSEFNSWFCRIILSTRNFSTEKLPVVRESRRVTPLDILSS------------ 118

Query: 1106 RLRSELHSVNQHSRPLPWRRSF-RPSRFN-GKEEIEERVLRWRASIYNRRLQALPLPSKN 933
            R R+ L+  N+ SRPLP RR F +P   + G + I +R L+WRASIYN+RL A+P+ S+N
Sbjct: 119  RQRAGLNVANRRSRPLPCRRRFGQPMPGSVGSDVIAQRKLQWRASIYNQRLHAVPISSRN 178

Query: 932  LPEQDTSRSSIFKERMQCRIKPWIQRELRAILQDPDPLVIVHLATSLYMLSLEEKLKASS 753
              +Q  SR+   K+R+  RI+PWIQREL+AIL+DPDP VIVHLA+SL++ SLE +    S
Sbjct: 179  CLKQIISRNGCMKQRILHRIEPWIQRELQAILEDPDPSVIVHLASSLFIASLERRSDVQS 238

Query: 752  EHVDLEDKFVKQLRPFLQDHTNLFWHELRCFSESAFEMATYDSIVEYK 609
            + + +ED F++ LR FL   TN FWHELRCF+ES+  M TYD +VEYK
Sbjct: 239  DQLGVEDHFLEPLRRFLHGWTNTFWHELRCFAESSLTMETYDMVVEYK 286


>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
          Length = 321

 Score =  243 bits (619), Expect = 1e-61
 Identities = 129/273 (47%), Positives = 178/273 (65%)
 Frame = -1

Query: 1424 KMSISMKIRNKSWCPICLEHINDRKAAVLSICMHVYCINCIKKWTNLEKRNCPLCNSKFD 1245
            K  ++  I  KS CPICL H+ DR+AAV++ C+H YC  CI++W++L KR CPLCN+ FD
Sbjct: 28   KKVMAPAIEGKS-CPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL-KRKCPLCNAHFD 85

Query: 1244 SWFIKSRYSSRQFEEERLPILNEKKRNGLEVETSETRRFSHQRSVRRLRSELHSVNQHSR 1065
            S F +   SS+ F +E+L  L E    G  V        + +R +RR   E +S  + +R
Sbjct: 86   SLFYRISLSSQTFLKEKLRPLAE----GGTVNFGGGN--AGRRVIRRYWDEXNSDGRRTR 139

Query: 1064 PLPWRRSFRPSRFNGKEEIEERVLRWRASIYNRRLQALPLPSKNLPEQDTSRSSIFKERM 885
            PLPWRRSF        + + ER+L+WRASIY++ +QA+P   +N  +Q+ S +S  KER+
Sbjct: 140  PLPWRRSFGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSPRNRLKQNISGNSSAKERI 199

Query: 884  QCRIKPWIQRELRAILQDPDPLVIVHLATSLYMLSLEEKLKASSEHVDLEDKFVKQLRPF 705
              RI+PWIQREL AIL DPDP VIVH+ATSL++ SLEE       ++  ED F+  LR F
Sbjct: 200  LQRIEPWIQRELHAILHDPDPAVIVHVATSLFVSSLEENTPLG--YLGGEDDFLAPLRSF 257

Query: 704  LQDHTNLFWHELRCFSESAFEMATYDSIVEYKP 606
            L + TN FWHEL CF++S F M TYD++V+Y+P
Sbjct: 258  LHNQTNTFWHELSCFADSTFNMETYDAVVKYEP 290


>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
          Length = 294

 Score =  239 bits (609), Expect = 2e-60
 Identities = 128/273 (46%), Positives = 178/273 (65%)
 Frame = -1

Query: 1424 KMSISMKIRNKSWCPICLEHINDRKAAVLSICMHVYCINCIKKWTNLEKRNCPLCNSKFD 1245
            K  ++  I  KS CPICL H+ DR+AAV++ C+H YC  CI++W++L KR CPLCN+ FD
Sbjct: 30   KKVMAPAIEGKS-CPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL-KRKCPLCNAHFD 87

Query: 1244 SWFIKSRYSSRQFEEERLPILNEKKRNGLEVETSETRRFSHQRSVRRLRSELHSVNQHSR 1065
            S F +   SS+ F +E+L  L E    G  V        + +R +RR   E +S ++ +R
Sbjct: 88   SLFYRISLSSQTFLKEKLRPLAE----GGTVNFGGGN--AGRRVLRRYWDESNSDSRRTR 141

Query: 1064 PLPWRRSFRPSRFNGKEEIEERVLRWRASIYNRRLQALPLPSKNLPEQDTSRSSIFKERM 885
            PLPWRRSF        + + ER+L+WRASIY++ +QA+P   +N  +Q+ S +S  KER+
Sbjct: 142  PLPWRRSFGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSPRNRLKQNISGNSSAKERI 201

Query: 884  QCRIKPWIQRELRAILQDPDPLVIVHLATSLYMLSLEEKLKASSEHVDLEDKFVKQLRPF 705
              RI+PWIQREL AIL DPD  VIVH+ATSL++ SLEE       ++  ED F+  LR F
Sbjct: 202  LQRIEPWIQRELHAILHDPDAAVIVHVATSLFVSSLEENTPLG--YLGGEDDFLAPLRSF 259

Query: 704  LQDHTNLFWHELRCFSESAFEMATYDSIVEYKP 606
            L + TN FWHEL CF++S F M TYD++V+Y+P
Sbjct: 260  LHNQTNTFWHELSCFADSTFNMETYDAVVKYEP 292


>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  238 bits (608), Expect = 2e-60
 Identities = 127/266 (47%), Positives = 175/266 (65%)
 Frame = -1

Query: 1403 IRNKSWCPICLEHINDRKAAVLSICMHVYCINCIKKWTNLEKRNCPLCNSKFDSWFIKSR 1224
            I  KS CPICL H+ DR+AAV++ C+H YC  CI++W++L KR CPLCN+ FDS F +  
Sbjct: 5    IEGKS-CPICLSHVVDRRAAVITACLHAYCFRCIRRWSDL-KRKCPLCNAHFDSLFYRIS 62

Query: 1223 YSSRQFEEERLPILNEKKRNGLEVETSETRRFSHQRSVRRLRSELHSVNQHSRPLPWRRS 1044
             SS+ F +E+L  L E    G  V        + +R +RR   E +S ++ +RPLPWRRS
Sbjct: 63   LSSQTFLKEKLRPLAE----GGTVNFGGGN--AGRRVLRRYWDESNSDSRRTRPLPWRRS 116

Query: 1043 FRPSRFNGKEEIEERVLRWRASIYNRRLQALPLPSKNLPEQDTSRSSIFKERMQCRIKPW 864
            F        + + ER+L+WRASIY++ +QA+P   +N  +Q+ S +S  KER+  RI+PW
Sbjct: 117  FGRPGSLPSDVVAERILQWRASIYSQGMQAVPFSPRNRLKQNISGNSSAKERILQRIEPW 176

Query: 863  IQRELRAILQDPDPLVIVHLATSLYMLSLEEKLKASSEHVDLEDKFVKQLRPFLQDHTNL 684
            IQREL AIL DPD  VIVH+ATSL++ SLEE       ++  ED F+  LR FL + TN 
Sbjct: 177  IQRELHAILHDPDAAVIVHVATSLFVSSLEENTPLG--YLGGEDDFLAPLRSFLHNQTNT 234

Query: 683  FWHELRCFSESAFEMATYDSIVEYKP 606
            FWHEL CF++S F M TYD++V+Y+P
Sbjct: 235  FWHELSCFADSTFNMETYDAVVKYEP 260


>ref|NP_850310.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|17473924|gb|AAL38373.1| putative RING zinc finger
            protein [Arabidopsis thaliana] gi|20148385|gb|AAM10083.1|
            putative RING zinc finger protein [Arabidopsis thaliana]
            gi|330254541|gb|AEC09635.1| RING/U-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 296

 Score =  231 bits (589), Expect = 4e-58
 Identities = 120/264 (45%), Positives = 175/264 (66%), Gaps = 2/264 (0%)
 Frame = -1

Query: 1385 CPICLEHINDRK-AAVLSICMHVYCINCIKKWTNLEKRNCPLCNSKFDSWFIKSRYSSRQ 1209
            CPICLE++ +R+ AAV+++C H YC+ CI+KW++  KRNCPLCN++FDSWFI S ++SR+
Sbjct: 39   CPICLENLTERRSAAVITVCKHGYCLACIRKWSSF-KRNCPLCNTRFDSWFIVSDFASRK 97

Query: 1208 FEEERLPILNEKKRNGLEVETSETRRFSHQRSVRRLRSELHSVNQHSRPLPWRRSFRPSR 1029
            + +E+LPIL +++           RR    R ++R R  L + +  SRPLPWRRSF    
Sbjct: 98   YHKEQLPILRDRETLTYHRNNPSDRR----RIIQRSRDVLENSSSRSRPLPWRRSFGRPG 153

Query: 1028 FNGKEEIEERVLRWRASIYNRRLQALPLPSKNLPEQDTSRSSIFKERMQCRIKPWIQREL 849
                  I +R L+WRASIY ++L+A+ L S+ L E   + +   K ++  RI+PWI+REL
Sbjct: 154  SVPDSVIFQRKLQWRASIYTKQLRAVRLHSRRL-ELSLAVNDYTKAKITERIEPWIRREL 212

Query: 848  RAILQDPDPLVIVHLATSLYMLSLE-EKLKASSEHVDLEDKFVKQLRPFLQDHTNLFWHE 672
            +A+L DPDP VIVH A++L++  LE E  + + +   L +  V  LR FL D  ++FWHE
Sbjct: 213  QAVLGDPDPSVIVHFASALFIKRLERENNRQTGQTGMLVEDEVSSLRKFLSDKVDIFWHE 272

Query: 671  LRCFSESAFEMATYDSIVEYKPLE 600
            LRCF+ES   M TYD++VEY  +E
Sbjct: 273  LRCFAESILTMETYDAVVEYNEVE 296