BLASTX nr result

ID: Coptis23_contig00015421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015421
         (2010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513370.1| conserved hypothetical protein [Ricinus comm...    66   1e-11
ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254...    60   1e-10
emb|CBI24192.3| unnamed protein product [Vitis vinifera]               60   1e-10
ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-08

>ref|XP_002513370.1| conserved hypothetical protein [Ricinus communis]
            gi|223547278|gb|EEF48773.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 384

 Score = 65.9 bits (159), Expect(2) = 1e-11
 Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
 Frame = +2

Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492
            ++L G G+  +DL+KI+NC  PR + +  N  F   + +++    S+   LK++   P  
Sbjct: 103  NLLQGLGIKPADLVKIINCR-PRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRNPSL 161

Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLM--RSLNASRGLVLSNKSK 1666
                        I+ YE +G+SK  L+P+L+S     PR+    + +   R   + N SK
Sbjct: 162  LTYDFHNCIKPAIALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPNTSK 221

Query: 1667 MNKCTVTLIAISRVETIRGKVVNIDR 1744
            M K  VT+I IS++ETIR KV N ++
Sbjct: 222  MYKYVVTIIGISKIETIREKVANFEK 247



 Score = 31.6 bits (70), Expect(2) = 1e-11
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
 Frame = +1

Query: 1111 LAKSAAVFYFTSQCPNFNTSICKFCSSSSPFD-------PKDSTQLFKRCGCNDAEINKI 1269
            L K +++F+ T++   ++T     C +    D       PKDS  + ++ GC+D ++ KI
Sbjct: 28   LTKGSSLFFITTKPATYST----LCHAQVENDTEGGLEQPKDSIGVLRKWGCSDRDLLKI 83

Query: 1270 FFHQPLL 1290
               +P L
Sbjct: 84   LSRRPSL 90


>ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254688 [Vitis vinifera]
          Length = 492

 Score = 60.1 bits (144), Expect(2) = 1e-10
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
 Frame = +2

Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492
            ++L   GLT +DL+KI+NC  PR +    N  F   + F+++   S+ +  K++   P  
Sbjct: 211  NVLSLLGLTSADLVKIINCR-PRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSL 269

Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLMRS------LNASRGLVLS 1654
                        +  YEG+G+++   + L++SS   RP  + R+      L   R   +S
Sbjct: 270  LIYDLNSKIKRVVELYEGMGVARKDFI-LMVSS---RPTMISRTSFNDEKLEYIRRTGVS 325

Query: 1655 NKSKMNKCTVTLIAISRVETIRGKVVNIDR 1744
             KSKM K  V L+ ISR+ETIR KV N+++
Sbjct: 326  KKSKMYKYVVVLMGISRLETIREKVGNLEK 355



 Score = 34.3 bits (77), Expect(2) = 1e-10
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +1

Query: 1207 PKDSTQLFKRCGCNDAEINKIFFHQPLL 1290
            P +ST +F++ GC+D+EI KIF  +P L
Sbjct: 171  PINSTDVFRKWGCSDSEIAKIFVRRPSL 198


>emb|CBI24192.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 60.1 bits (144), Expect(2) = 1e-10
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
 Frame = +2

Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492
            ++L   GLT +DL+KI+NC  PR +    N  F   + F+++   S+ +  K++   P  
Sbjct: 129  NVLSLLGLTSADLVKIINCR-PRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSL 187

Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLMRS------LNASRGLVLS 1654
                        +  YEG+G+++   + L++SS   RP  + R+      L   R   +S
Sbjct: 188  LIYDLNSKIKRVVELYEGMGVARKDFI-LMVSS---RPTMISRTSFNDEKLEYIRRTGVS 243

Query: 1655 NKSKMNKCTVTLIAISRVETIRGKVVNIDR 1744
             KSKM K  V L+ ISR+ETIR KV N+++
Sbjct: 244  KKSKMYKYVVVLMGISRLETIREKVGNLEK 273



 Score = 34.3 bits (77), Expect(2) = 1e-10
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +1

Query: 1207 PKDSTQLFKRCGCNDAEINKIFFHQPLL 1290
            P +ST +F++ GC+D+EI KIF  +P L
Sbjct: 89   PINSTDVFRKWGCSDSEIAKIFVRRPSL 116


>ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|222853574|gb|EEE91121.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score = 60.1 bits (144), Expect(2) = 3e-08
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 5/146 (3%)
 Frame = +2

Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492
            ++L G G+T +DL+KI+NC  PR +    N  F   + +++    S+   LK++   P  
Sbjct: 37   NLLWGLGITSNDLVKIINCR-PRLLSVRINHFFDERLEYFMTLFGSRETLLKAIIRNPSL 95

Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLIS--S*FPRPRSLMRSLNASRGLVLSNKSK 1666
                        I+ YEGLGIS+  LVPLL+S  +  PR       +   R   +S  S 
Sbjct: 96   LTYDFHNRIKPVITLYEGLGISREDLVPLLLSRPTMIPRTSFNDEKMEYIRKSGVSKDSN 155

Query: 1667 MNKCTVTLIAISRVETIRGKVVNIDR 1744
            M K  V++I +SR +TI  K  NI++
Sbjct: 156  MFKHVVSIIGVSRSQTICEKAANIEK 181



 Score = 26.2 bits (56), Expect(2) = 3e-08
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 1222 QLFKRCGCNDAEINKIFFHQPLL 1290
            ++ +R GC+D +I K+F  +P L
Sbjct: 2    EVLRRYGCSDDDIEKMFLRRPSL 24


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