BLASTX nr result
ID: Coptis23_contig00015421
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015421 (2010 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513370.1| conserved hypothetical protein [Ricinus comm... 66 1e-11 ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254... 60 1e-10 emb|CBI24192.3| unnamed protein product [Vitis vinifera] 60 1e-10 ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|2... 60 3e-08 >ref|XP_002513370.1| conserved hypothetical protein [Ricinus communis] gi|223547278|gb|EEF48773.1| conserved hypothetical protein [Ricinus communis] Length = 384 Score = 65.9 bits (159), Expect(2) = 1e-11 Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 5/146 (3%) Frame = +2 Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492 ++L G G+ +DL+KI+NC PR + + N F + +++ S+ LK++ P Sbjct: 103 NLLQGLGIKPADLVKIINCR-PRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRNPSL 161 Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLM--RSLNASRGLVLSNKSK 1666 I+ YE +G+SK L+P+L+S PR+ + + R + N SK Sbjct: 162 LTYDFHNCIKPAIALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPNTSK 221 Query: 1667 MNKCTVTLIAISRVETIRGKVVNIDR 1744 M K VT+I IS++ETIR KV N ++ Sbjct: 222 MYKYVVTIIGISKIETIREKVANFEK 247 Score = 31.6 bits (70), Expect(2) = 1e-11 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Frame = +1 Query: 1111 LAKSAAVFYFTSQCPNFNTSICKFCSSSSPFD-------PKDSTQLFKRCGCNDAEINKI 1269 L K +++F+ T++ ++T C + D PKDS + ++ GC+D ++ KI Sbjct: 28 LTKGSSLFFITTKPATYST----LCHAQVENDTEGGLEQPKDSIGVLRKWGCSDRDLLKI 83 Query: 1270 FFHQPLL 1290 +P L Sbjct: 84 LSRRPSL 90 >ref|XP_002264095.1| PREDICTED: uncharacterized protein LOC100254688 [Vitis vinifera] Length = 492 Score = 60.1 bits (144), Expect(2) = 1e-10 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%) Frame = +2 Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492 ++L GLT +DL+KI+NC PR + N F + F+++ S+ + K++ P Sbjct: 211 NVLSLLGLTSADLVKIINCR-PRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSL 269 Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLMRS------LNASRGLVLS 1654 + YEG+G+++ + L++SS RP + R+ L R +S Sbjct: 270 LIYDLNSKIKRVVELYEGMGVARKDFI-LMVSS---RPTMISRTSFNDEKLEYIRRTGVS 325 Query: 1655 NKSKMNKCTVTLIAISRVETIRGKVVNIDR 1744 KSKM K V L+ ISR+ETIR KV N+++ Sbjct: 326 KKSKMYKYVVVLMGISRLETIREKVGNLEK 355 Score = 34.3 bits (77), Expect(2) = 1e-10 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +1 Query: 1207 PKDSTQLFKRCGCNDAEINKIFFHQPLL 1290 P +ST +F++ GC+D+EI KIF +P L Sbjct: 171 PINSTDVFRKWGCSDSEIAKIFVRRPSL 198 >emb|CBI24192.3| unnamed protein product [Vitis vinifera] Length = 410 Score = 60.1 bits (144), Expect(2) = 1e-10 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 9/150 (6%) Frame = +2 Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492 ++L GLT +DL+KI+NC PR + N F + F+++ S+ + K++ P Sbjct: 129 NVLSLLGLTSADLVKIINCR-PRFLSCRINRCFDERIEFFLELFGSRDFLRKAIVRNPSL 187 Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLISS*FPRPRSLMRS------LNASRGLVLS 1654 + YEG+G+++ + L++SS RP + R+ L R +S Sbjct: 188 LIYDLNSKIKRVVELYEGMGVARKDFI-LMVSS---RPTMISRTSFNDEKLEYIRRTGVS 243 Query: 1655 NKSKMNKCTVTLIAISRVETIRGKVVNIDR 1744 KSKM K V L+ ISR+ETIR KV N+++ Sbjct: 244 KKSKMYKYVVVLMGISRLETIREKVGNLEK 273 Score = 34.3 bits (77), Expect(2) = 1e-10 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = +1 Query: 1207 PKDSTQLFKRCGCNDAEINKIFFHQPLL 1290 P +ST +F++ GC+D+EI KIF +P L Sbjct: 89 PINSTDVFRKWGCSDSEIAKIFVRRPSL 116 >ref|XP_002310671.1| predicted protein [Populus trichocarpa] gi|222853574|gb|EEE91121.1| predicted protein [Populus trichocarpa] Length = 318 Score = 60.1 bits (144), Expect(2) = 3e-08 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 5/146 (3%) Frame = +2 Query: 1322 HILLGTGLTWSDLLKIVNCSLPRSVVTLTNP*FPS-VPFWIQGDASQSYCLKSVA--PXX 1492 ++L G G+T +DL+KI+NC PR + N F + +++ S+ LK++ P Sbjct: 37 NLLWGLGITSNDLVKIINCR-PRLLSVRINHFFDERLEYFMTLFGSRETLLKAIIRNPSL 95 Query: 1493 XXXXXXXXXXXXISSYEGLGISKGSLVPLLIS--S*FPRPRSLMRSLNASRGLVLSNKSK 1666 I+ YEGLGIS+ LVPLL+S + PR + R +S S Sbjct: 96 LTYDFHNRIKPVITLYEGLGISREDLVPLLLSRPTMIPRTSFNDEKMEYIRKSGVSKDSN 155 Query: 1667 MNKCTVTLIAISRVETIRGKVVNIDR 1744 M K V++I +SR +TI K NI++ Sbjct: 156 MFKHVVSIIGVSRSQTICEKAANIEK 181 Score = 26.2 bits (56), Expect(2) = 3e-08 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = +1 Query: 1222 QLFKRCGCNDAEINKIFFHQPLL 1290 ++ +R GC+D +I K+F +P L Sbjct: 2 EVLRRYGCSDDDIEKMFLRRPSL 24