BLASTX nr result

ID: Coptis23_contig00015418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015418
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318641.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002322157.1| predicted protein [Populus trichocarpa] gi|1...    93   2e-17
ref|XP_002511430.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
emb|CBI15061.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002283257.1| PREDICTED: uncharacterized protein LOC100246...    88   8e-16

>ref|XP_002318641.1| predicted protein [Populus trichocarpa] gi|222859314|gb|EEE96861.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/71 (67%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 203 IAGPKWKTFIRRFNKNNRDRNGAERY-GKYQYDPLSYSLNFDEGP-GQNGKFD--DDDLA 36
           +AGPKWKTFIRRFN+N    +G  R+ GK+QYDP SYSLNFDEGP GQNG  D  DD   
Sbjct: 81  VAGPKWKTFIRRFNRNKNSGSGNGRHHGKFQYDPFSYSLNFDEGPGGQNGNLDDLDDYNG 140

Query: 35  FRDFSHRYASI 3
           FRDFS RYAS+
Sbjct: 141 FRDFSSRYASV 151


>ref|XP_002322157.1| predicted protein [Populus trichocarpa] gi|118486982|gb|ABK95323.1|
           unknown [Populus trichocarpa]
           gi|222869153|gb|EEF06284.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/71 (66%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
 Frame = -2

Query: 203 IAGPKWKTFIRRFNKNNRDRNGA-ERYGKYQYDPLSYSLNFDEGP-GQNGKFD--DDDLA 36
           +AGPKWKTFIRRFN+     +G+  R+G +QYDPLSYSLNFDEGP GQ G FD  DD   
Sbjct: 81  VAGPKWKTFIRRFNRTKSSGSGSGRRHGNFQYDPLSYSLNFDEGPGGQKGDFDELDDYGG 140

Query: 35  FRDFSHRYASI 3
           FRDFS RYAS+
Sbjct: 141 FRDFSSRYASV 151


>ref|XP_002511430.1| conserved hypothetical protein [Ricinus communis]
           gi|223550545|gb|EEF52032.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 4/71 (5%)
 Frame = -2

Query: 203 IAGPKWKTFIRRFNKNNRDRNGAERYGKYQYDPLSYSLNFDEGPGQNGKF----DDDDLA 36
           +AGPKWKTFIRRFN+ NR        GK+QYDPLSY+LNFDE  GQNG F    +DD   
Sbjct: 84  VAGPKWKTFIRRFNRCNRGSGNGRHNGKFQYDPLSYALNFDE--GQNGHFHDEENDDYGG 141

Query: 35  FRDFSHRYASI 3
           FRDFS RYAS+
Sbjct: 142 FRDFSSRYASV 152


>emb|CBI15061.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = -2

Query: 200 AGPKWKTFIRRFNKNNRDRNGAERYGKYQYDPLSYSLNFDEGPGQNGKFDDDDLAFRDFS 21
           AGP+WKTFIRRFNK    R+G  R+GK+QYDPLSYSLNFDEG G NG  DDD     +F+
Sbjct: 79  AGPRWKTFIRRFNKT---RSGGARHGKFQYDPLSYSLNFDEGAGHNGSSDDD--RGYEFT 133

Query: 20  HRYASI 3
            RYAS+
Sbjct: 134 ARYASV 139


>ref|XP_002283257.1| PREDICTED: uncharacterized protein LOC100246674 [Vitis vinifera]
          Length = 163

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/66 (65%), Positives = 50/66 (75%)
 Frame = -2

Query: 200 AGPKWKTFIRRFNKNNRDRNGAERYGKYQYDPLSYSLNFDEGPGQNGKFDDDDLAFRDFS 21
           AGP+WKTFIRRFNK    R+G  R+GK+QYDPLSYSLNFDEG G NG  DDD     +F+
Sbjct: 86  AGPRWKTFIRRFNKT---RSGGARHGKFQYDPLSYSLNFDEGAGHNGSSDDD--RGYEFT 140

Query: 20  HRYASI 3
            RYAS+
Sbjct: 141 ARYASV 146


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