BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015412
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...    67   2e-09
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...    64   2e-08
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...    62   4e-08
emb|CBI38027.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s...    59   3e-07

>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
 Frame = -2

Query: 436  KFISKDKIVGSSRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKFDDV 257
            K + +++    S  P +N E    N G S+ G N        +S     V F+KRK  + 
Sbjct: 837  KALKENREAALSMKPKNN-ENGHNNGGASLEGQNTATDSNRRKSGNKDDVGFRKRKMQNQ 895

Query: 256  -MEXXXXXXXXXXXXXXXXXXKEVVDTLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRW 80
              E                  K+VVD LD+L+EQY+SKFS K    ++GEK+ S+QL++W
Sbjct: 896  EQEAGQKVLKKRLKKNKGSVGKDVVDKLDMLVEQYKSKFSHKGSLENDGEKRHSKQLRKW 955

Query: 79   FES 71
            F+S
Sbjct: 956  FQS 958


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
 Frame = -2

Query: 442  KGKFISKDKIVGSSRNPNSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKFD 263
            K K   K+     S  P +N E  ++N G S+ G N        +S       F+KRK  
Sbjct: 833  KSKKALKENPEALSMKPKNN-ENGQSNGGASLEGQNTATYSNRRKSGNREDWGFRKRKIQ 891

Query: 262  DV-MEXXXXXXXXXXXXXXXXXXKEVVDTLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLK 86
            +   E                  K+V D LD+LIEQYRSKFS K    ++GE++ S+QL+
Sbjct: 892  NQEQEAGQKVSKKRPKKNKDSVGKDVGDKLDMLIEQYRSKFSHKGSQENDGERKPSKQLR 951

Query: 85   RWFES 71
            +WF+S
Sbjct: 952  KWFQS 956


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
 Frame = -2

Query: 391  NSNGEGAETNVGKSVTGANVGNGIRELRSKQNMRVDFKKRKFDD---VMEXXXXXXXXXX 221
            NS+G G   +  K +   +  +  R  +S +   +  KKRK  +   V E          
Sbjct: 864  NSHGIGKPDDE-KPLKAESTISKARNSKSSEESNMLPKKRKLQEHIAVQEGKSPKQKTRT 922

Query: 220  XXXXXXXXKEVVDTLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 71
                    + ++D LD+L+EQYR+KFSQ+  + ++G+KQGSRQLKRWF+S
Sbjct: 923  RRSKDPSGQVILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS 972


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 25/40 (62%), Positives = 36/40 (90%)
 Frame = -2

Query: 190 VVDTLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 71
           ++D LD+L+EQYR+KFSQ+  + ++G+KQGSRQLKRWF+S
Sbjct: 879 ILDKLDMLVEQYRAKFSQQTDDKTDGQKQGSRQLKRWFQS 918


>ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
            truncatula] gi|355480031|gb|AES61234.1| Eukaryotic
            translation initiation factor 3 subunit G [Medicago
            truncatula]
          Length = 962

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
 Frame = -2

Query: 427  SKDKIVGSSRNPNSNGEGAETNVGKSVTGANVG-NGIRELRSKQNMRVDFKKRKFDDVME 251
            SK+    SS     N +  + +  K   G N   +  R++  K+   V F KRK  +  +
Sbjct: 844  SKESPKASSARKLKNNQDGQNHGAKLHEGKNSSIDSNRKISGKKEDAV-FGKRKMHNQEQ 902

Query: 250  XXXXXXXXXXXXXXXXXXKEVVDTLDLLIEQYRSKFSQKKQNTSEGEKQGSRQLKRWFES 71
                              K+ VD LD+LIEQYRSKFS K    ++GEK+ S+QL++WF+S
Sbjct: 903  AGEKVSRKRPKKNKDSVGKDTVDKLDMLIEQYRSKFSHKGSQGNDGEKKQSKQLRKWFQS 962